RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 CCDC171Q6TFL3 1326 aa15.34■□□□□ 0.05
SPIN3-243ENST00000640717 CYP19A1P11511 503 aaPredicted RBP15.33■□□□□ 0.05
SPIN3-243ENST00000640717 VPS53Q5VIR6 699 aa15.33■□□□□ 0.05
SPIN3-243ENST00000640717 RUFY3Q7L099 469 aa15.33■□□□□ 0.05
SPIN3-243ENST00000640717 FOSBP53539 338 aa15.33■□□□□ 0.04
SPIN3-243ENST00000640717 CREB3L3Q68CJ9 461 aa15.33■□□□□ 0.04
SPIN3-243ENST00000640717 CIZ1Q9ULV3 898 aaPredicted RBP15.33■□□□□ 0.04
SPIN3-243ENST00000640717 CRYBG1Q9Y4K1 1723 aa15.33■□□□□ 0.04
SPIN3-243ENST00000640717 CEP126Q9P2H0 1117 aa15.33■□□□□ 0.04
SPIN3-243ENST00000640717 EYA2O00167 538 aa15.32■□□□□ 0.04
SPIN3-243ENST00000640717 EIF5BO60841 1220 aaKnown RBP15.32■□□□□ 0.04
SPIN3-243ENST00000640717 CAVIN1Q6NZI2 390 aaKnown RBP15.32■□□□□ 0.04
SPIN3-243ENST00000640717 CHST3Q7LGC8 479 aa15.32■□□□□ 0.04
SPIN3-243ENST00000640717 PDRG1Q9NUG6 133 aa15.32■□□□□ 0.04
SPIN3-243ENST00000640717 SCARF1Q14162 830 aa15.32■□□□□ 0.04
SPIN3-243ENST00000640717 IFIT5Q13325 482 aaKnown RBP15.31■□□□□ 0.04
SPIN3-243ENST00000640717 LDHAL6AQ6ZMR3 332 aa15.31■□□□□ 0.04
SPIN3-243ENST00000640717 CNNM1Q9NRU3 951 aa15.31■□□□□ 0.04
SPIN3-243ENST00000640717 KCPQ6ZWJ8 1503 aa15.31■□□□□ 0.04
SPIN3-243ENST00000640717 USP42Q9H9J4 1324 aaKnown RBP15.31■□□□□ 0.04
SPIN3-243ENST00000640717 MRC1P22897 1456 aa15.31■□□□□ 0.04
SPIN3-243ENST00000640717 IRS4O14654 1257 aaPredicted RBP15.31■□□□□ 0.04
SPIN3-243ENST00000640717 IFIT1P09914 478 aaKnown RBP15.31■□□□□ 0.04
SPIN3-243ENST00000640717 ZKSCAN1P17029 563 aaPredicted RBP15.31■□□□□ 0.04
SPIN3-243ENST00000640717 ITGA6P23229 1130 aa15.31■□□□□ 0.04
SPIN3-243ENST00000640717 NSFL1CQ9UNZ2 370 aaKnown RBP15.31■□□□□ 0.04
SPIN3-243ENST00000640717 GOLGA6L3A6NEY3 463 aa15.3■□□□□ 0.04
SPIN3-243ENST00000640717 GOLGA6L22H0YM25 854 aa15.3■□□□□ 0.04
SPIN3-243ENST00000640717 SLC27A2O14975 620 aa15.3■□□□□ 0.04
SPIN3-243ENST00000640717 METTL24Q5JXM2 366 aa15.3■□□□□ 0.04
SPIN3-243ENST00000640717 NLRP10Q86W26 655 aa15.3■□□□□ 0.04
SPIN3-243ENST00000640717 GAS2L3Q86XJ1 694 aa15.3■□□□□ 0.04
SPIN3-243ENST00000640717 ISCA1Q9BUE6 129 aa15.3■□□□□ 0.04
SPIN3-243ENST00000640717 NUCB2P80303 420 aa15.3■□□□□ 0.04
SPIN3-243ENST00000640717 MAP3K15Q6ZN16 1313 aa15.3■□□□□ 0.04
SPIN3-243ENST00000640717 TAF5LO75529 589 aa15.3■□□□□ 0.04
SPIN3-243ENST00000640717 WASHC4Q2M389 1173 aa15.3■□□□□ 0.04
SPIN3-243ENST00000640717 GIGYF2Q6Y7W6 1299 aaKnown RBP15.3■□□□□ 0.04
SPIN3-243ENST00000640717 ATP5JP18859 108 aa15.29■□□□□ 0.04
SPIN3-243ENST00000640717 ANAPC15P60006 121 aa15.29■□□□□ 0.04
SPIN3-243ENST00000640717 HAND2P61296 217 aa15.29■□□□□ 0.04
SPIN3-243ENST00000640717 ITPK1Q13572 414 aa15.29■□□□□ 0.04
SPIN3-243ENST00000640717 CYP46A1Q9Y6A2 500 aa15.29■□□□□ 0.04
SPIN3-243ENST00000640717 COL15A1P39059 1388 aa15.29■□□□□ 0.04
SPIN3-243ENST00000640717 ADAMTS7Q9UKP4 1686 aa15.29■□□□□ 0.04
SPIN3-243ENST00000640717 FERMT3Q86UX7 667 aa15.29■□□□□ 0.04
SPIN3-243ENST00000640717 PAG1Q9NWQ8 432 aa15.29■□□□□ 0.04
SPIN3-243ENST00000640717 IQSEC3Q9UPP2 1182 aaPredicted RBP15.29■□□□□ 0.04
SPIN3-243ENST00000640717 IL15P40933 162 aaPredicted RBP15.28■□□□□ 0.04
SPIN3-243ENST00000640717 CRKLP46109 303 aaKnown RBP15.28■□□□□ 0.04
SPIN3-243ENST00000640717 NECTIN1Q15223 517 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 TTLL5Q6EMB2 1281 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 XAGE2Q96GT9 111 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 SEC31BQ9NQW1 1179 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 PKD1L3Q7Z443 1732 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 LOC102724428A0A0B4J2F2 783 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 SIK1P57059 783 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 FGD1P98174 961 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 TTC39AQ5SRH9 613 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 RAB11FIP4Q86YS3 637 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 STK11IPQ8N1F8 1099 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 ERBB4Q15303 1308 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 SPATA31A1Q5TZJ5 1347 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 UBN2Q6ZU65 1347 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 ROBO1Q9Y6N7 1651 aa15.28■□□□□ 0.04
SPIN3-243ENST00000640717 VPS37CA5D8V6 355 aaPredicted RBP15.27■□□□□ 0.04
SPIN3-243ENST00000640717 XRCC6P12956 609 aaKnown RBP eCLIP15.27■□□□□ 0.04
SPIN3-243ENST00000640717 FAM173BQ6P4H8 233 aa15.27■□□□□ 0.04
SPIN3-243ENST00000640717 ZBTB38Q8NAP3 1195 aaPredicted RBP15.27■□□□□ 0.04
SPIN3-243ENST00000640717 ME3Q16798 604 aa15.27■□□□□ 0.04
SPIN3-243ENST00000640717 MAP4K1Q92918 833 aa15.27■□□□□ 0.04
SPIN3-243ENST00000640717 TPCN1Q9ULQ1 816 aa15.27■□□□□ 0.04
SPIN3-243ENST00000640717 LIMCH1Q9UPQ0 1083 aa15.27■□□□□ 0.04
SPIN3-243ENST00000640717 WTIPA6NIX2 430 aaPredicted RBP15.27■□□□□ 0.03
SPIN3-243ENST00000640717 ZAP70P43403 619 aa15.27■□□□□ 0.03
SPIN3-243ENST00000640717 TTLL11Q8NHH1 800 aa15.27■□□□□ 0.03
SPIN3-243ENST00000640717 TTC14Q96N46 770 aa15.27■□□□□ 0.03
SPIN3-243ENST00000640717 BCL9O00512 1426 aa15.26■□□□□ 0.03
SPIN3-243ENST00000640717 SUSD4Q5VX71 490 aa15.26■□□□□ 0.03
SPIN3-243ENST00000640717 HAUS7Q99871 368 aa15.26■□□□□ 0.03
SPIN3-243ENST00000640717 CWC22Q9HCG8 908 aaKnown RBP15.26■□□□□ 0.03
SPIN3-243ENST00000640717 SMC3Q9UQE7 1217 aa15.26■□□□□ 0.03
SPIN3-243ENST00000640717 AFDNP55196 1824 aaKnown RBP15.26■□□□□ 0.03
SPIN3-243ENST00000640717 KDM4AO75164 1064 aa15.26■□□□□ 0.03
SPIN3-243ENST00000640717 HSP90B1P14625 803 aaKnown RBP15.26■□□□□ 0.03
SPIN3-243ENST00000640717 TEX13AQ9BXU3 409 aaPredicted RBP15.26■□□□□ 0.03
SPIN3-243ENST00000640717 ZNF609O15014 1411 aa15.25■□□□□ 0.03
SPIN3-243ENST00000640717 BLOC1S2Q6QNY1 142 aa15.25■□□□□ 0.03
SPIN3-243ENST00000640717 NIP7Q9Y221 180 aaKnown RBP eCLIP15.25■□□□□ 0.03
SPIN3-243ENST00000640717 TOM1O60784 492 aa15.25■□□□□ 0.03
SPIN3-243ENST00000640717 PCCAP05165 728 aaPredicted RBP15.25■□□□□ 0.03
SPIN3-243ENST00000640717 CYP2E1P05181 493 aaPredicted RBP15.25■□□□□ 0.03
SPIN3-243ENST00000640717 DDX11Q96FC9 970 aa15.25■□□□□ 0.03
SPIN3-243ENST00000640717 GJB2P29033 226 aa15.25■□□□□ 0.03
SPIN3-243ENST00000640717 LMBRD1Q9NUN5 540 aa15.25■□□□□ 0.03
SPIN3-243ENST00000640717 GLI3P10071 1580 aa15.25■□□□□ 0.03
SPIN3-243ENST00000640717 FIBPO43427 364 aa15.24■□□□□ 0.03
SPIN3-243ENST00000640717 IDH1O75874 414 aaKnown RBP15.24■□□□□ 0.03
SPIN3-243ENST00000640717 CYP21A2P08686 494 aa15.24■□□□□ 0.03
SPIN3-243ENST00000640717 MCM2P49736 904 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms