RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 VPS53Q5VIR6 699 aa9.46□□□□□ -0.89
NECAP1-227ENST00000640648 ZNF530Q6P9A1 599 aaPredicted RBP9.46□□□□□ -0.89
NECAP1-227ENST00000640648 ARMC9Q7Z3E5 817 aa9.46□□□□□ -0.89
NECAP1-227ENST00000640648 DDX12PQ92771 950 aa9.46□□□□□ -0.89
NECAP1-227ENST00000640648 UGGT2Q9NYU1 1516 aa9.46□□□□□ -0.89
NECAP1-227ENST00000640648 GPATCH8Q9UKJ3 1502 aaKnown RBP9.46□□□□□ -0.89
NECAP1-227ENST00000640648 EVA1CP58658 441 aa9.46□□□□□ -0.89
NECAP1-227ENST00000640648 NUDT16Q96DE0 195 aaKnown RBP9.46□□□□□ -0.89
NECAP1-227ENST00000640648 RABEP2Q9H5N1 569 aa9.46□□□□□ -0.89
NECAP1-227ENST00000640648 ODF2LQ9ULJ1 636 aa9.46□□□□□ -0.89
NECAP1-227ENST00000640648 ABCC11Q96J66 1382 aa9.46□□□□□ -0.89
NECAP1-227ENST00000640648 RPGRIP1LQ68CZ1 1315 aa9.46□□□□□ -0.9
NECAP1-227ENST00000640648 PER1O15534 1290 aaPredicted RBP9.46□□□□□ -0.9
NECAP1-227ENST00000640648 GFM2Q969S9 779 aaKnown RBP9.46□□□□□ -0.9
NECAP1-227ENST00000640648 CCDC61Q9Y6R9 512 aa9.46□□□□□ -0.9
NECAP1-227ENST00000640648 MYL6BP14649 208 aa9.46□□□□□ -0.9
NECAP1-227ENST00000640648 OAS2P29728 719 aaKnown RBP9.46□□□□□ -0.9
NECAP1-227ENST00000640648 PAFAH1B1P43034 410 aa9.46□□□□□ -0.9
NECAP1-227ENST00000640648 APBA1Q02410 837 aa9.46□□□□□ -0.9
NECAP1-227ENST00000640648 CCDC174Q6PII3 467 aa9.46□□□□□ -0.9
NECAP1-227ENST00000640648 FAM177A1Q8N128 213 aaPredicted RBP9.46□□□□□ -0.9
NECAP1-227ENST00000640648 PPFIBP2Q8ND30 876 aa9.46□□□□□ -0.9
NECAP1-227ENST00000640648 TOP1P11387 765 aaKnown RBP9.45□□□□□ -0.9
NECAP1-227ENST00000640648 SATB2Q9UPW6 733 aa9.45□□□□□ -0.9
NECAP1-227ENST00000640648 PPFIA4O75335 1185 aa9.45□□□□□ -0.9
NECAP1-227ENST00000640648 PRPHP41219 470 aa9.45□□□□□ -0.9
NECAP1-227ENST00000640648 HNRNPH2P55795 449 aaKnown RBP9.45□□□□□ -0.9
NECAP1-227ENST00000640648 PRPF40BQ6NWY9 871 aaKnown RBP9.45□□□□□ -0.9
NECAP1-227ENST00000640648 CACNA2D3Q8IZS8 1091 aa9.45□□□□□ -0.9
NECAP1-227ENST00000640648 TTC14Q96N46 770 aa9.45□□□□□ -0.9
NECAP1-227ENST00000640648 ZNF165P49910 485 aa9.45□□□□□ -0.9
NECAP1-227ENST00000640648 BRPF1P55201 1214 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-227ENST00000640648 ATP11AP98196 1134 aa9.45□□□□□ -0.9
NECAP1-227ENST00000640648 SNCBQ16143 134 aa9.45□□□□□ -0.9
NECAP1-227ENST00000640648 GRIPAP1Q4V328 841 aa9.45□□□□□ -0.9
NECAP1-227ENST00000640648 ERICH2A1L162 156 aa9.45□□□□□ -0.9
NECAP1-227ENST00000640648 DESP17661 470 aa9.45□□□□□ -0.9
NECAP1-227ENST00000640648 PLEKHO1Q53GL0 409 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-227ENST00000640648 STAG1Q8WVM7 1258 aa9.45□□□□□ -0.9
NECAP1-227ENST00000640648 LZICQ8WZA0 190 aa9.45□□□□□ -0.9
NECAP1-227ENST00000640648 TBC1D31Q96DN5 1066 aa9.45□□□□□ -0.9
NECAP1-227ENST00000640648 GNL3LQ9NVN8 582 aaKnown RBP9.45□□□□□ -0.9
NECAP1-227ENST00000640648 LRRD1A4D1F6 860 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 RAD51AP2Q09MP3 1159 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 TMED1Q13445 227 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 RBSNQ9H1K0 784 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 LOC102724159A0A0B4J2E5 919 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 PWP2Q15269 919 aaKnown RBP9.44□□□□□ -0.9
NECAP1-227ENST00000640648 ESCO1Q5FWF5 840 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 WDR78Q5VTH9 848 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 MBIPQ9NS73 344 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 CREB3O43889 395 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 NUCB1Q02818 461 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 TADA2BQ86TJ2 420 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 OSBPL9Q96SU4 736 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 MTMR7Q9Y216 660 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 URB2Q14146 1524 aaKnown RBP9.44□□□□□ -0.9
NECAP1-227ENST00000640648 KDM2BQ8NHM5 1336 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 NOS1P29475 1434 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 SESN3P58005 492 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 P3H4Q92791 437 aa9.44□□□□□ -0.9
NECAP1-227ENST00000640648 IQCGQ9H095 443 aaKnown RBP9.44□□□□□ -0.9
NECAP1-227ENST00000640648 PRAG1Q86YV5 1406 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 FAM177BA6PVY3 158 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 PPP1R12BO60237 982 aaPredicted RBP9.43□□□□□ -0.9
NECAP1-227ENST00000640648 GIGYF1O75420 1035 aaPredicted RBP9.43□□□□□ -0.9
NECAP1-227ENST00000640648 TEX11Q8IYF3 940 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 PDLIM2Q96JY6 352 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 RAD21O60216 631 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 TAX1BP1Q86VP1 789 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 VPS37DQ86XT2 251 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 TRIM7Q9C029 511 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 TTC12Q9H892 705 aaPredicted RBP9.43□□□□□ -0.9
NECAP1-227ENST00000640648 CHCHD3Q9NX63 227 aaKnown RBP9.43□□□□□ -0.9
NECAP1-227ENST00000640648 CWC25Q9NXE8 425 aaPredicted RBP9.43□□□□□ -0.9
NECAP1-227ENST00000640648 SPG7Q9UQ90 795 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 KIF14Q15058 1648 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 TACC1O75410 805 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 CYP2C19P33261 490 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 CKAP2LQ8IYA6 745 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 ARHGAP18Q8N392 663 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 TRIM4Q9C037 500 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 ZFXP17010 805 aaPredicted RBP9.43□□□□□ -0.9
NECAP1-227ENST00000640648 CDC25BP30305 580 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 IDI1Q13907 227 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 KRT32Q14532 448 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 ATL3Q6DD88 541 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 DAAM1Q9Y4D1 1078 aa9.43□□□□□ -0.9
NECAP1-227ENST00000640648 CRYMQ14894 314 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 FCHSD1Q86WN1 690 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 C16orf71Q8IYS4 520 aaPredicted RBP9.42□□□□□ -0.9
NECAP1-227ENST00000640648 GTF3C6Q969F1 213 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 KIF1BPQ96EK5 621 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 CDK5RAP3Q96JB5 506 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 CFAP57Q96MR6 1250 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 ZNF830Q96NB3 372 aaPredicted RBP9.42□□□□□ -0.9
NECAP1-227ENST00000640648 SPTLC3Q9NUV7 552 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 GRIN2AQ12879 1464 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 IGSF3O75054 1194 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 TTC22Q5TAA0 569 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms