RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 FANCAO15360 1455 aa16.91■□□□□ 0.3
HNRNPU-226ENST00000640218 CBX1P83916 185 aa16.91■□□□□ 0.3
HNRNPU-226ENST00000640218 XAGE3Q8WTP9 111 aa16.91■□□□□ 0.3
HNRNPU-226ENST00000640218 STXBP4Q6ZWJ1 553 aa16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 BRF1Q92994 677 aa16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 IQSEC3Q9UPP2 1182 aaPredicted RBP16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 LMTK3Q96Q04 1460 aa16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 NEMFO60524 1076 aa16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 SDSP20132 328 aa16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 NUCB1Q02818 461 aa16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 HLTFQ14527 1009 aaKnown RBP eCLIP16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 PYM1Q9BRP8 204 aaKnown RBP16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 DENND4BO75064 1496 aaPredicted RBP16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 CYP7A1P22680 504 aa16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 GSTO1P78417 241 aa16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 MMRN2Q9H8L6 949 aa16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 TSPY3P0CV98 308 aa16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 TSPY8P0CW00 308 aa16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 PUF60Q9UHX1 559 aaKnown RBP16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 DHX29Q7Z478 1369 aaKnown RBP16.9■□□□□ 0.3
HNRNPU-226ENST00000640218 SLC39A6Q13433 755 aa16.89■□□□□ 0.3
HNRNPU-226ENST00000640218 EP400NLQ6ZTU2 488 aa16.89■□□□□ 0.3
HNRNPU-226ENST00000640218 GRIN2AQ12879 1464 aa16.89■□□□□ 0.3
HNRNPU-226ENST00000640218 COPS6Q7L5N1 327 aa16.89■□□□□ 0.29
HNRNPU-226ENST00000640218 SPECC1Q5M775 1068 aa16.89■□□□□ 0.29
HNRNPU-226ENST00000640218 ZCRB1Q8TBF4 217 aaKnown RBP16.89■□□□□ 0.29
HNRNPU-226ENST00000640218 SLC4A4Q9Y6R1 1079 aa16.89■□□□□ 0.29
HNRNPU-226ENST00000640218 GCOM1H8Y6P7 765 aaPredicted RBP16.89■□□□□ 0.29
HNRNPU-226ENST00000640218 POLR3GO15318 223 aaPredicted RBP16.89■□□□□ 0.29
HNRNPU-226ENST00000640218 MYZAPP0CAP1 466 aa16.89■□□□□ 0.29
HNRNPU-226ENST00000640218 IFIT1BQ5T764 474 aaKnown RBP16.89■□□□□ 0.29
HNRNPU-226ENST00000640218 ZSCAN16Q9H4T2 348 aaPredicted RBP16.89■□□□□ 0.29
HNRNPU-226ENST00000640218 TMX3Q96JJ7 454 aa16.89■□□□□ 0.29
HNRNPU-226ENST00000640218 DRC1Q96MC2 740 aa16.89■□□□□ 0.29
HNRNPU-226ENST00000640218 EXOC1Q9NV70 894 aa16.89■□□□□ 0.29
HNRNPU-226ENST00000640218 CADPS2Q86UW7 1296 aa16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 KRT23Q9C075 422 aa16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 RPRD2Q5VT52 1461 aaKnown RBP16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 TTC21AQ8NDW8 1320 aa16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 ZBTB43O43298 467 aa16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 GIMAP6Q6P9H5 292 aa16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 TBC1D32Q96NH3 1257 aa16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 SYKP43405 635 aa16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 UBE4AQ14139 1066 aa16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 TRIM47Q96LD4 638 aa16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 TCEANC2Q96MN5 208 aa16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 INCENPQ9NQS7 918 aa16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 F8W031 263 aaPredicted RBP16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 MYO1BO43795 1136 aa16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 RRP9O43818 475 aaKnown RBP16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 ATP6V1AP38606 617 aa16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 TFCP2L1Q9NZI6 479 aa16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 NAA15Q9BXJ9 866 aaKnown RBP16.88■□□□□ 0.29
HNRNPU-226ENST00000640218 ALG1Q9BT22 464 aa16.87■□□□□ 0.29
HNRNPU-226ENST00000640218 TAOK3Q9H2K8 898 aa16.87■□□□□ 0.29
HNRNPU-226ENST00000640218 AFMP43652 599 aa16.87■□□□□ 0.29
HNRNPU-226ENST00000640218 CGNQ9P2M7 1197 aaKnown RBP16.87■□□□□ 0.29
HNRNPU-226ENST00000640218 ZSCAN22P10073 491 aaPredicted RBP16.87■□□□□ 0.29
HNRNPU-226ENST00000640218 SNW1Q13573 536 aaKnown RBP16.87■□□□□ 0.29
HNRNPU-226ENST00000640218 ATP2B3Q16720 1220 aa16.87■□□□□ 0.29
HNRNPU-226ENST00000640218 BICD1Q96G01 975 aa16.87■□□□□ 0.29
HNRNPU-226ENST00000640218 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
HNRNPU-226ENST00000640218 NBPF7P0C2Y1 421 aaPredicted RBP16.87■□□□□ 0.29
HNRNPU-226ENST00000640218 MAP3K9P80192 1104 aa16.87■□□□□ 0.29
HNRNPU-226ENST00000640218 RBM8AQ9Y5S9 174 aaKnown RBP16.87■□□□□ 0.29
HNRNPU-226ENST00000640218 TBCAO75347 108 aaKnown RBP16.86■□□□□ 0.29
HNRNPU-226ENST00000640218 RBM25P49756 843 aaKnown RBP16.86■□□□□ 0.29
HNRNPU-226ENST00000640218 LRRC27Q9C0I9 530 aa16.86■□□□□ 0.29
HNRNPU-226ENST00000640218 N4BP3O15049 544 aa16.86■□□□□ 0.29
HNRNPU-226ENST00000640218 JADE2Q9NQC1 790 aa16.86■□□□□ 0.29
HNRNPU-226ENST00000640218 GJA3Q9Y6H8 435 aa16.86■□□□□ 0.29
HNRNPU-226ENST00000640218 GRM8O00222 908 aa16.86■□□□□ 0.29
HNRNPU-226ENST00000640218 ZFYP08048 801 aaPredicted RBP16.86■□□□□ 0.29
HNRNPU-226ENST00000640218 HEATR3Q7Z4Q2 680 aa16.86■□□□□ 0.29
HNRNPU-226ENST00000640218 RTN1Q16799 776 aa16.86■□□□□ 0.29
HNRNPU-226ENST00000640218 ESR2Q92731 530 aa16.85■□□□□ 0.29
HNRNPU-226ENST00000640218 HDAC1Q13547 482 aaPredicted RBP16.85■□□□□ 0.29
HNRNPU-226ENST00000640218 ZSCAN23Q3MJ62 389 aa16.85■□□□□ 0.29
HNRNPU-226ENST00000640218 MCMDC2Q4G0Z9 681 aa16.85■□□□□ 0.29
HNRNPU-226ENST00000640218 RRAGBQ5VZM2 374 aa16.85■□□□□ 0.29
HNRNPU-226ENST00000640218 LMBR1LQ6UX01 489 aa16.85■□□□□ 0.29
HNRNPU-226ENST00000640218 PDE1AP54750 535 aa16.85■□□□□ 0.29
HNRNPU-226ENST00000640218 Q6ZUG5 572 aa16.85■□□□□ 0.29
HNRNPU-226ENST00000640218 ARHGAP45Q92619 1136 aa16.85■□□□□ 0.29
HNRNPU-226ENST00000640218 LAMC3Q9Y6N6 1575 aa16.85■□□□□ 0.29
HNRNPU-226ENST00000640218 HCLS1P14317 486 aaPredicted RBP16.85■□□□□ 0.29
HNRNPU-226ENST00000640218 STAT6P42226 847 aa16.85■□□□□ 0.29
HNRNPU-226ENST00000640218 PRDM10Q9NQV6 1147 aa16.85■□□□□ 0.29
HNRNPU-226ENST00000640218 RMND1Q9NWS8 449 aa16.85■□□□□ 0.29
HNRNPU-226ENST00000640218 CCDC174Q6PII3 467 aa16.84■□□□□ 0.29
HNRNPU-226ENST00000640218 CNPY2Q9Y2B0 182 aa16.84■□□□□ 0.29
HNRNPU-226ENST00000640218 PICALMQ13492 652 aa16.84■□□□□ 0.29
HNRNPU-226ENST00000640218 HSP90AA4PQ58FG1 418 aa16.84■□□□□ 0.29
HNRNPU-226ENST00000640218 C8orf58Q8NAV2 365 aa16.84■□□□□ 0.29
HNRNPU-226ENST00000640218 CNNM2Q9H8M5 875 aa16.84■□□□□ 0.29
HNRNPU-226ENST00000640218 ESYT1Q9BSJ8 1104 aa16.84■□□□□ 0.29
HNRNPU-226ENST00000640218 ZSWIM4Q9H7M6 989 aa16.84■□□□□ 0.29
HNRNPU-226ENST00000640218 PPIP5K1Q6PFW1 1433 aa16.84■□□□□ 0.29
HNRNPU-226ENST00000640218 UBASH3AP57075 661 aa16.84■□□□□ 0.29
HNRNPU-226ENST00000640218 SMC1AQ14683 1233 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms