RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
SPIN3-230ENST00000639888 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
SPIN3-230ENST00000639888 DUOX2Q9NRD8 1548 aa12.79□□□□□ -0.36
SPIN3-230ENST00000639888 CCDC196A0A1B0GTZ2 297 aa12.79□□□□□ -0.36
SPIN3-230ENST00000639888 CHMLP26374 656 aa12.79□□□□□ -0.36
SPIN3-230ENST00000639888 AP1ARQ63HQ0 302 aa12.79□□□□□ -0.36
SPIN3-230ENST00000639888 PIK3C2GO75747 1445 aa12.79□□□□□ -0.36
SPIN3-230ENST00000639888 COL17A1Q9UMD9 1497 aaPredicted RBP12.79□□□□□ -0.36
SPIN3-230ENST00000639888 TTC6Q86TZ1 520 aa12.79□□□□□ -0.36
SPIN3-230ENST00000639888 ORC3Q9UBD5 711 aaPredicted RBP12.79□□□□□ -0.36
SPIN3-230ENST00000639888 CCT4P50991 539 aaKnown RBP12.79□□□□□ -0.36
SPIN3-230ENST00000639888 HSP90AB4PQ58FF6 505 aa12.79□□□□□ -0.36
SPIN3-230ENST00000639888 KIAA1328Q86T90 577 aa12.79□□□□□ -0.36
SPIN3-230ENST00000639888 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.79□□□□□ -0.36
SPIN3-230ENST00000639888 A0A087WWV3 80 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 TRIM29Q14134 588 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 CCDC181Q5TID7 509 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 CARD14Q9BXL6 1004 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 MCM3P25205 808 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 HSPA4P34932 840 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 CCDC144BQ3MJ40 725 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 ZNF569Q5MCW4 686 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 TADA2BQ86TJ2 420 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 ANKRD18AQ8IVF6 992 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 CCDC144CPQ8IYA2 1237 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 MRPL50Q8N5N7 158 aaKnown RBP12.78□□□□□ -0.36
SPIN3-230ENST00000639888 ARHGAP45Q92619 1136 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 PPP1R13BQ96KQ4 1090 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 ATP8B1O43520 1251 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 NR1I2O75469 434 aa12.78□□□□□ -0.36
SPIN3-230ENST00000639888 BICC1Q9H694 974 aaKnown RBP12.78□□□□□ -0.36
SPIN3-230ENST00000639888 PPARDQ03181 441 aa12.77□□□□□ -0.36
SPIN3-230ENST00000639888 CPLX2Q6PUV4 134 aaKnown RBP12.77□□□□□ -0.36
SPIN3-230ENST00000639888 XPO4Q9C0E2 1151 aaKnown RBP12.77□□□□□ -0.36
SPIN3-230ENST00000639888 MATR3P43243 847 aaKnown RBP eCLIP12.77□□□□□ -0.37
SPIN3-230ENST00000639888 ATP2B2Q01814 1243 aa12.77□□□□□ -0.37
SPIN3-230ENST00000639888 KLHL10Q6JEL2 608 aa12.77□□□□□ -0.37
SPIN3-230ENST00000639888 BCAS4Q8TDM0 211 aa12.77□□□□□ -0.37
SPIN3-230ENST00000639888 LCMT1Q9UIC8 334 aa12.77□□□□□ -0.37
SPIN3-230ENST00000639888 G3BP1Q13283 466 aaKnown RBP eCLIP12.77□□□□□ -0.37
SPIN3-230ENST00000639888 NFE2L2Q16236 605 aa12.77□□□□□ -0.37
SPIN3-230ENST00000639888 N4BP2L2Q92802 583 aaPredicted RBP12.77□□□□□ -0.37
SPIN3-230ENST00000639888 MPHOSPH8Q99549 860 aa12.77□□□□□ -0.37
SPIN3-230ENST00000639888 PARD6BQ9BYG5 372 aa12.77□□□□□ -0.37
SPIN3-230ENST00000639888 FAM204AQ9H8W3 233 aa12.77□□□□□ -0.37
SPIN3-230ENST00000639888 ABCA8O94911 1581 aa12.77□□□□□ -0.37
SPIN3-230ENST00000639888 BCORL1Q5H9F3 1711 aa12.77□□□□□ -0.37
SPIN3-230ENST00000639888 FCHSD2O94868 740 aa12.76□□□□□ -0.37
SPIN3-230ENST00000639888 RSRC1Q96IZ7 334 aaKnown RBP12.76□□□□□ -0.37
SPIN3-230ENST00000639888 ASXL1Q8IXJ9 1541 aa12.76□□□□□ -0.37
SPIN3-230ENST00000639888 ECM2O94769 699 aaPredicted RBP12.76□□□□□ -0.37
SPIN3-230ENST00000639888 MUM1L1Q5H9M0 696 aa12.76□□□□□ -0.37
SPIN3-230ENST00000639888 LEO1Q8WVC0 666 aaPredicted RBP12.76□□□□□ -0.37
SPIN3-230ENST00000639888 MRFAP1L1Q96HT8 127 aa12.76□□□□□ -0.37
SPIN3-230ENST00000639888 ODF2LQ9ULJ1 636 aa12.76□□□□□ -0.37
SPIN3-230ENST00000639888 KIF4AO95239 1232 aa12.76□□□□□ -0.37
SPIN3-230ENST00000639888 SATB1Q01826 763 aa12.76□□□□□ -0.37
SPIN3-230ENST00000639888 TDRD7Q8NHU6 1098 aaKnown RBP12.76□□□□□ -0.37
SPIN3-230ENST00000639888 BRF1Q92994 677 aa12.76□□□□□ -0.37
SPIN3-230ENST00000639888 CTAGE9A4FU28 777 aa12.76□□□□□ -0.37
SPIN3-230ENST00000639888 KIF1CO43896 1103 aaKnown RBP12.76□□□□□ -0.37
SPIN3-230ENST00000639888 BRD3Q15059 726 aa12.76□□□□□ -0.37
SPIN3-230ENST00000639888 CEP85Q6P2H3 762 aa12.76□□□□□ -0.37
SPIN3-230ENST00000639888 VAMP4O75379 141 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 CUL4AQ13619 759 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 RRP12Q5JTH9 1297 aaKnown RBP12.75□□□□□ -0.37
SPIN3-230ENST00000639888 RBM33Q96EV2 1170 aaKnown RBP12.75□□□□□ -0.37
SPIN3-230ENST00000639888 GOLGA6CA6NDK9 693 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 POLR3DP05423 398 aaPredicted RBP12.75□□□□□ -0.37
SPIN3-230ENST00000639888 CCDC175P0C221 793 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 GOLGA6DP0CG33 693 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 PLA2G4AP47712 749 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 CCT2P78371 535 aaKnown RBP12.75□□□□□ -0.37
SPIN3-230ENST00000639888 NEDD9Q14511 834 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 CCDC121Q6ZUS5 278 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 CDC37L1Q7L3B6 337 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 BAG1Q99933 345 aaPredicted RBP12.75□□□□□ -0.37
SPIN3-230ENST00000639888 GOLGA6AQ9NYA3 693 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 MIS18AQ9NYP9 233 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 NCOA3Q9Y6Q9 1424 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 RPSAP08865 295 aaKnown RBP12.75□□□□□ -0.37
SPIN3-230ENST00000639888 TEFQ10587 303 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 CEP85LQ5SZL2 805 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 LARP1Q6PKG0 1096 aaKnown RBP12.75□□□□□ -0.37
SPIN3-230ENST00000639888 NUP133Q8WUM0 1156 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 MBIPQ9NS73 344 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 MTMR6Q9Y217 621 aa12.75□□□□□ -0.37
SPIN3-230ENST00000639888 POLR3AO14802 1390 aaPredicted RBP12.75□□□□□ -0.37
SPIN3-230ENST00000639888 JMYQ8N9B5 988 aa12.74□□□□□ -0.37
SPIN3-230ENST00000639888 CC2D1AQ6P1N0 951 aaPredicted RBP12.74□□□□□ -0.37
SPIN3-230ENST00000639888 B4GALNT4Q76KP1 1039 aa12.74□□□□□ -0.37
SPIN3-230ENST00000639888 PAIP2Q9BPZ3 127 aaKnown RBP12.74□□□□□ -0.37
SPIN3-230ENST00000639888 HYPKQ9NX55 129 aa12.74□□□□□ -0.37
SPIN3-230ENST00000639888 TULP2O00295 520 aa12.74□□□□□ -0.37
SPIN3-230ENST00000639888 MICAL1Q8TDZ2 1067 aa12.74□□□□□ -0.37
SPIN3-230ENST00000639888 KIF1BPQ96EK5 621 aa12.74□□□□□ -0.37
SPIN3-230ENST00000639888 IMPACTQ9P2X3 320 aa12.74□□□□□ -0.37
SPIN3-230ENST00000639888 ARHGEF5Q12774 1597 aa12.74□□□□□ -0.37
SPIN3-230ENST00000639888 PRR29P0C7W0 189 aa12.74□□□□□ -0.37
SPIN3-230ENST00000639888 FKBP15Q5T1M5 1219 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms