RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 GZF1Q9H116 711 aaPredicted RBP18.26■□□□□ 0.51
TRIM3-215ENST00000639856 BTAF1O14981 1849 aa18.26■□□□□ 0.51
TRIM3-215ENST00000639856 ZNF594Q96JF6 807 aaPredicted RBP18.26■□□□□ 0.51
TRIM3-215ENST00000639856 BRPF3Q9ULD4 1205 aa18.26■□□□□ 0.51
TRIM3-215ENST00000639856 UBN2Q6ZU65 1347 aa18.26■□□□□ 0.51
TRIM3-215ENST00000639856 RAD50Q92878 1312 aa18.26■□□□□ 0.51
TRIM3-215ENST00000639856 ERVV-1B6SEH8 477 aa18.25■□□□□ 0.51
TRIM3-215ENST00000639856 SKOR2Q2VWA4 1001 aaPredicted RBP18.25■□□□□ 0.51
TRIM3-215ENST00000639856 HSP90AB3PQ58FF7 597 aa18.25■□□□□ 0.51
TRIM3-215ENST00000639856 ZGPATQ8N5A5 531 aaKnown RBP18.25■□□□□ 0.51
TRIM3-215ENST00000639856 IL27Q8NEV9 243 aa18.25■□□□□ 0.51
TRIM3-215ENST00000639856 CCDC85AQ96PX6 553 aaPredicted RBP18.25■□□□□ 0.51
TRIM3-215ENST00000639856 ATRNO75882 1429 aa18.25■□□□□ 0.51
TRIM3-215ENST00000639856 LINC00116Q8NCU8 138 aa18.25■□□□□ 0.51
TRIM3-215ENST00000639856 TMX3Q96JJ7 454 aa18.25■□□□□ 0.51
TRIM3-215ENST00000639856 NHSQ6T4R5 1651 aa18.24■□□□□ 0.51
TRIM3-215ENST00000639856 GOLGA6L22H0YM25 854 aa18.24■□□□□ 0.51
TRIM3-215ENST00000639856 BAG4O95429 457 aaKnown RBP18.24■□□□□ 0.51
TRIM3-215ENST00000639856 ATG9AQ7Z3C6 839 aa18.24■□□□□ 0.51
TRIM3-215ENST00000639856 FSD2A1L4K1 749 aa18.23■□□□□ 0.51
TRIM3-215ENST00000639856 TNNI3KQ59H18 835 aa18.23■□□□□ 0.51
TRIM3-215ENST00000639856 FPGT-TNNI3KV9GXZ4 949 aa18.23■□□□□ 0.51
TRIM3-215ENST00000639856 ZNF831Q5JPB2 1677 aa18.23■□□□□ 0.51
TRIM3-215ENST00000639856 LRRC24Q50LG9 513 aa18.23■□□□□ 0.51
TRIM3-215ENST00000639856 LSG1Q9H089 658 aaKnown RBP18.23■□□□□ 0.51
TRIM3-215ENST00000639856 GOLGA6L3A6NEY3 463 aa18.22■□□□□ 0.51
TRIM3-215ENST00000639856 CUL4AQ13619 759 aa18.22■□□□□ 0.51
TRIM3-215ENST00000639856 CWC27Q6UX04 472 aaKnown RBP18.22■□□□□ 0.51
TRIM3-215ENST00000639856 ZNF34Q8IZ26 560 aa18.22■□□□□ 0.51
TRIM3-215ENST00000639856 PLA2G12BQ9BX93 195 aa18.22■□□□□ 0.51
TRIM3-215ENST00000639856 DBNLQ9UJU6 430 aaKnown RBP18.22■□□□□ 0.51
TRIM3-215ENST00000639856 MYH3P11055 1940 aa18.22■□□□□ 0.51
TRIM3-215ENST00000639856 CAMTA2O94983 1202 aa18.22■□□□□ 0.51
TRIM3-215ENST00000639856 PKP1Q13835 747 aa18.22■□□□□ 0.51
TRIM3-215ENST00000639856 KIAA1211Q6ZU35 1233 aa18.22■□□□□ 0.51
TRIM3-215ENST00000639856 RUFY2Q8WXA3 655 aa18.22■□□□□ 0.51
TRIM3-215ENST00000639856 EVI5LQ96CN4 794 aa18.22■□□□□ 0.51
TRIM3-215ENST00000639856 PUS3Q9BZE2 481 aaKnown RBP18.22■□□□□ 0.51
TRIM3-215ENST00000639856 DIAPH3Q9NSV4 1193 aa18.22■□□□□ 0.51
TRIM3-215ENST00000639856 TRMT112Q9UI30 125 aaKnown RBP18.22■□□□□ 0.51
TRIM3-215ENST00000639856 TRPC5Q9UL62 973 aaPredicted RBP18.22■□□□□ 0.51
TRIM3-215ENST00000639856 CDHR2Q9BYE9 1310 aa18.22■□□□□ 0.51
TRIM3-215ENST00000639856 SBF2Q86WG5 1849 aa18.21■□□□□ 0.51
TRIM3-215ENST00000639856 SEPT12Q8IYM1 358 aa18.2■□□□□ 0.5
TRIM3-215ENST00000639856 UPF3BQ9BZI7 483 aaKnown RBP18.2■□□□□ 0.5
TRIM3-215ENST00000639856 EYA2O00167 538 aa18.2■□□□□ 0.5
TRIM3-215ENST00000639856 CSF1RP07333 972 aa18.2■□□□□ 0.5
TRIM3-215ENST00000639856 CCDC57Q2TAC2 916 aa18.2■□□□□ 0.5
TRIM3-215ENST00000639856 SMIM5Q71RC9 77 aa18.2■□□□□ 0.5
TRIM3-215ENST00000639856 INTS4Q96HW7 963 aaKnown RBP18.2■□□□□ 0.5
TRIM3-215ENST00000639856 DBNDD2Q9BQY9 259 aa18.2■□□□□ 0.5
TRIM3-215ENST00000639856 BOLA2Q9H3K6 86 aa18.2■□□□□ 0.5
TRIM3-215ENST00000639856 IRS4O14654 1257 aaPredicted RBP18.19■□□□□ 0.5
TRIM3-215ENST00000639856 ONECUT3O60422 494 aaPredicted RBP18.19■□□□□ 0.5
TRIM3-215ENST00000639856 FAM177BA6PVY3 158 aa18.19■□□□□ 0.5
TRIM3-215ENST00000639856 SUSD4Q5VX71 490 aa18.19■□□□□ 0.5
TRIM3-215ENST00000639856 SNX14Q9Y5W7 946 aa18.19■□□□□ 0.5
TRIM3-215ENST00000639856 BCORQ6W2J9 1755 aa18.18■□□□□ 0.5
TRIM3-215ENST00000639856 IL15P40933 162 aaPredicted RBP18.18■□□□□ 0.5
TRIM3-215ENST00000639856 TTLL11Q8NHH1 800 aa18.18■□□□□ 0.5
TRIM3-215ENST00000639856 GREM2Q9H772 168 aa18.18■□□□□ 0.5
TRIM3-215ENST00000639856 QTRT2Q9H974 415 aaKnown RBP18.18■□□□□ 0.5
TRIM3-215ENST00000639856 ZDHHC9Q9Y397 364 aa18.18■□□□□ 0.5
TRIM3-215ENST00000639856 EP400Q96L91 3159 aa18.18■□□□□ 0.5
TRIM3-215ENST00000639856 CTSWP56202 376 aa18.17■□□□□ 0.5
TRIM3-215ENST00000639856 ISY1Q9ULR0 285 aaKnown RBP18.17■□□□□ 0.5
TRIM3-215ENST00000639856 CIAO1O76071 339 aa18.17■□□□□ 0.5
TRIM3-215ENST00000639856 HIP1O00291 1037 aa18.16■□□□□ 0.5
TRIM3-215ENST00000639856 IFIT5Q13325 482 aaKnown RBP18.16■□□□□ 0.5
TRIM3-215ENST00000639856 MCTP1Q6DN14 999 aa18.16■□□□□ 0.5
TRIM3-215ENST00000639856 EDC3Q96F86 508 aaKnown RBP18.16■□□□□ 0.5
TRIM3-215ENST00000639856 NDUFB9Q9Y6M9 179 aa18.16■□□□□ 0.5
TRIM3-215ENST00000639856 CNTNAP4Q9C0A0 1308 aa18.16■□□□□ 0.5
TRIM3-215ENST00000639856 ZNF609O15014 1411 aa18.16■□□□□ 0.5
TRIM3-215ENST00000639856 XRCC6P12956 609 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRIM3-215ENST00000639856 ITGA6P23229 1130 aa18.16■□□□□ 0.5
TRIM3-215ENST00000639856 TIMM10P62072 90 aa18.16■□□□□ 0.5
TRIM3-215ENST00000639856 KLHL40Q2TBA0 621 aa18.16■□□□□ 0.5
TRIM3-215ENST00000639856 NOL8Q76FK4 1167 aaKnown RBP18.16■□□□□ 0.5
TRIM3-215ENST00000639856 RASEFQ8IZ41 740 aa18.16■□□□□ 0.5
TRIM3-215ENST00000639856 NIP7Q9Y221 180 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRIM3-215ENST00000639856 HCLS1P14317 486 aaPredicted RBP18.15■□□□□ 0.5
TRIM3-215ENST00000639856 TAF7LQ5H9L4 462 aa18.15■□□□□ 0.5
TRIM3-215ENST00000639856 NEUROD6Q96NK8 337 aa18.15■□□□□ 0.5
TRIM3-215ENST00000639856 CCNL1Q9UK58 526 aaPredicted RBP18.15■□□□□ 0.5
TRIM3-215ENST00000639856 LY75O60449 1722 aa18.15■□□□□ 0.5
TRIM3-215ENST00000639856 PDE8AO60658 829 aa18.14■□□□□ 0.5
TRIM3-215ENST00000639856 ATP5JP18859 108 aa18.14■□□□□ 0.5
TRIM3-215ENST00000639856 PTH1RQ03431 593 aa18.14■□□□□ 0.5
TRIM3-215ENST00000639856 TTC14Q96N46 770 aa18.14■□□□□ 0.5
TRIM3-215ENST00000639856 DDX60Q8IY21 1712 aaKnown RBP18.14■□□□□ 0.49
TRIM3-215ENST00000639856 MRE11P49959 708 aa18.14■□□□□ 0.49
TRIM3-215ENST00000639856 UTP14AQ9BVJ6 771 aaKnown RBP18.14■□□□□ 0.49
TRIM3-215ENST00000639856 DDX49Q9Y6V7 483 aaKnown RBP18.14■□□□□ 0.49
TRIM3-215ENST00000639856 TAF1LQ8IZX4 1826 aa18.14■□□□□ 0.49
TRIM3-215ENST00000639856 SH3TC1Q8TE82 1336 aa18.13■□□□□ 0.49
TRIM3-215ENST00000639856 BRWD3Q6RI45 1802 aa18.13■□□□□ 0.49
TRIM3-215ENST00000639856 GPR108Q9NPR9 543 aa18.13■□□□□ 0.49
TRIM3-215ENST00000639856 RIC1Q4ADV7 1423 aa18.13■□□□□ 0.49
TRIM3-215ENST00000639856 A0A1B0GUL7 405 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms