RNA–Protein interactions for RNA: ENST00000639760.1

SMARCA2-266, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-266ENST00000639760 TSPY10P0CW01 314 aa12.34□□□□□ -0.43
SMARCA2-266ENST00000639760 PPP2R3AQ06190 1150 aa12.34□□□□□ -0.43
SMARCA2-266ENST00000639760 DDR1Q08345 913 aa12.34□□□□□ -0.43
SMARCA2-266ENST00000639760 VPS53Q5VIR6 699 aa12.34□□□□□ -0.43
SMARCA2-266ENST00000639760 OTUD6BQ8N6M0 293 aa12.34□□□□□ -0.43
SMARCA2-266ENST00000639760 GOLGA1Q92805 767 aa12.34□□□□□ -0.43
SMARCA2-266ENST00000639760 FAM210AQ96ND0 272 aa12.34□□□□□ -0.43
SMARCA2-266ENST00000639760 TRIM6Q9C030 488 aaPredicted RBP12.34□□□□□ -0.43
SMARCA2-266ENST00000639760 IQGAP2Q13576 1575 aa12.34□□□□□ -0.43
SMARCA2-266ENST00000639760 N4BP1O75113 896 aaKnown RBP12.34□□□□□ -0.43
SMARCA2-266ENST00000639760 TXLNAP40222 546 aa12.34□□□□□ -0.43
SMARCA2-266ENST00000639760 DHX8Q14562 1220 aaKnown RBP12.34□□□□□ -0.43
SMARCA2-266ENST00000639760 HSP90B2PQ58FF3 399 aa12.34□□□□□ -0.43
SMARCA2-266ENST00000639760 HNRNPLLQ8WVV9 542 aaKnown RBP12.34□□□□□ -0.43
SMARCA2-266ENST00000639760 NPHP3Q7Z494 1330 aa12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 VPS37CA5D8V6 355 aaPredicted RBP12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 SFPQP23246 707 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 RDXP35241 583 aaKnown RBP12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 CRYMQ14894 314 aa12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 C11orf57Q6ZUT1 292 aaPredicted RBP12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 ANKRD44Q8N8A2 993 aa12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 PRPF38AQ8NAV1 312 aaKnown RBP12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 CABS1Q96KC9 395 aa12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 ETAA1Q9NY74 926 aa12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 TTC21AQ8NDW8 1320 aa12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 FANCGO15287 622 aa12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 GJB2P29033 226 aa12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 ZC3H12AQ5D1E8 599 aaKnown RBP12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 AP1ARQ63HQ0 302 aa12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 UTP14AQ9BVJ6 771 aaKnown RBP12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 ACBD3Q9H3P7 528 aa12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 OSBPL3Q9H4L5 887 aa12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
SMARCA2-266ENST00000639760 KIF24Q5T7B8 1368 aa12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 TMCO5BA8MYB1 307 aa12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 APBB1O00213 710 aa12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 CTAGE5O15320 804 aa12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 ADCY2Q08462 1091 aa12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 TBC1D8BQ0IIM8 1120 aa12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 STX1AQ16623 288 aa12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 BEND6Q5SZJ8 279 aaPredicted RBP12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 ARMCX5Q6P1M9 558 aa12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 TATDN2Q93075 761 aa12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 PLEKHF1Q96S99 279 aa12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 DUOX2Q9NRD8 1548 aa12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 PSME1Q06323 249 aa12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 PREPLQ4J6C6 727 aaPredicted RBP12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 MPHOSPH8Q99549 860 aa12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 FAM169AQ9Y6X4 670 aa12.32□□□□□ -0.44
SMARCA2-266ENST00000639760 TOPBP1Q92547 1522 aa12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 ATP10DQ9P241 1426 aa12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 NR1I2O75469 434 aa12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 PDE1AP54750 535 aa12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 MAP3K9P80192 1104 aa12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 CCDC102AQ96A19 550 aa12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 FAM204AQ9H8W3 233 aa12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 MRFAP1Q9Y605 127 aa12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 ARHGEF40Q8TER5 1519 aa12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 CHUKO15111 745 aa12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 ERLIN1O75477 346 aa12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 AK2P54819 239 aa12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 ZKSCAN4Q969J2 545 aaPredicted RBP12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 TTC14Q96N46 770 aa12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 SCAND2PQ9GZW5 306 aaPredicted RBP12.31□□□□□ -0.44
SMARCA2-266ENST00000639760 IFT140Q96RY7 1462 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 UNC13BO14795 1591 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 IPO7O95373 1038 aaKnown RBP12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 INPP5BP32019 993 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 MRPL12P52815 198 aaKnown RBP12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 GRIK3Q13003 919 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 RUFY3Q7L099 469 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 RPAP2Q8IXW5 612 aaPredicted RBP12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 ODF2LQ9ULJ1 636 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 RAPGEF6Q8TEU7 1601 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 EPB41L2O43491 1005 aaKnown RBP12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 CHMLP26374 656 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 ARID4AP29374 1257 aaPredicted RBP12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 HSPA4P34932 840 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 USP5P45974 858 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 ISM2Q6H9L7 571 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 TMC6Q7Z403 805 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 DHX40Q8IX18 779 aaKnown RBP12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 AFAP1L1Q8TED9 768 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 SPATA32Q96LK8 384 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 CLIC6Q96NY7 704 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 SH3GL3Q99963 347 aa12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 API5Q9BZZ5 524 aaKnown RBP12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 NUCKS1Q9H1E3 243 aaKnown RBP12.3□□□□□ -0.44
SMARCA2-266ENST00000639760 EBAG9O00559 213 aa12.29□□□□□ -0.44
SMARCA2-266ENST00000639760 BICD2Q8TD16 824 aa12.29□□□□□ -0.44
SMARCA2-266ENST00000639760 ZNF483Q8TF39 744 aaPredicted RBP12.29□□□□□ -0.44
SMARCA2-266ENST00000639760 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
SMARCA2-266ENST00000639760 L1RE1Q9UN81 338 aa12.29□□□□□ -0.44
SMARCA2-266ENST00000639760 SPHKAPQ2M3C7 1700 aa12.29□□□□□ -0.44
SMARCA2-266ENST00000639760 POTEB2H3BUK9 544 aa12.29□□□□□ -0.44
SMARCA2-266ENST00000639760 PHACTR2O75167 634 aa12.29□□□□□ -0.44
SMARCA2-266ENST00000639760 CCNHP51946 323 aaPredicted RBP12.29□□□□□ -0.44
SMARCA2-266ENST00000639760 NUTM1Q86Y26 1132 aa12.29□□□□□ -0.44
SMARCA2-266ENST00000639760 CCDC83Q8IWF9 413 aa12.29□□□□□ -0.44
SMARCA2-266ENST00000639760 USP32Q8NFA0 1604 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms