RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 PHF8Q9UPP1 1060 aa11.12□□□□□ -0.63
NECAP1-215ENST00000639071 PXDNQ92626 1479 aa11.12□□□□□ -0.63
NECAP1-215ENST00000639071 LTN1O94822 1766 aa11.12□□□□□ -0.63
NECAP1-215ENST00000639071 ALDH1L1O75891 902 aa11.12□□□□□ -0.63
NECAP1-215ENST00000639071 HOXB7P09629 217 aa11.12□□□□□ -0.63
NECAP1-215ENST00000639071 U2AF2P26368 475 aaKnown RBP eCLIP11.12□□□□□ -0.633e-6■■■■□ 23.7
NECAP1-215ENST00000639071 EPHA10Q5JZY3 1008 aa11.12□□□□□ -0.63
NECAP1-215ENST00000639071 RNF20Q5VTR2 975 aa11.12□□□□□ -0.63
NECAP1-215ENST00000639071 RIC3Q7Z5B4 369 aa11.12□□□□□ -0.63
NECAP1-215ENST00000639071 PGBD1Q96JS3 809 aa11.12□□□□□ -0.63
NECAP1-215ENST00000639071 DNAJC2Q99543 621 aaKnown RBP11.12□□□□□ -0.63
NECAP1-215ENST00000639071 NPHP4O75161 1426 aaPredicted RBP11.12□□□□□ -0.63
NECAP1-215ENST00000639071 PDCP20941 246 aa11.11□□□□□ -0.63
NECAP1-215ENST00000639071 PSME1Q06323 249 aa11.11□□□□□ -0.63
NECAP1-215ENST00000639071 NAA30Q147X3 362 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-215ENST00000639071 SLFNL1Q499Z3 407 aa11.11□□□□□ -0.63
NECAP1-215ENST00000639071 PLEKHO1Q53GL0 409 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-215ENST00000639071 ESCO1Q5FWF5 840 aa11.11□□□□□ -0.63
NECAP1-215ENST00000639071 SMAP1Q8IYB5 467 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-215ENST00000639071 PDCL2Q8N4E4 241 aa11.11□□□□□ -0.63
NECAP1-215ENST00000639071 BRF1Q92994 677 aa11.11□□□□□ -0.63
NECAP1-215ENST00000639071 IGSF3O75054 1194 aa11.11□□□□□ -0.63
NECAP1-215ENST00000639071 ZNF165P49910 485 aa11.11□□□□□ -0.63
NECAP1-215ENST00000639071 ZNF592Q92610 1267 aa11.11□□□□□ -0.63
NECAP1-215ENST00000639071 ERCC4Q92889 916 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-215ENST00000639071 SCAND2PQ9GZW5 306 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-215ENST00000639071 NAP1L2Q9ULW6 460 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-215ENST00000639071 H3BQV1 296 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 IGKV5-2P06315 115 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 FGD1P98174 961 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 ARID5BQ14865 1188 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 IFFO2Q5TF58 517 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 Q6ZUG5 572 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 LINS1Q8NG48 757 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 COL15A1P39059 1388 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 KDM3BQ7LBC6 1761 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 HIP1O00291 1037 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 TAF5LO75529 589 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 ZNF75DP51815 510 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 CCDC144BQ3MJ40 725 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 CCDC144CPQ8IYA2 1237 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 MYD88Q99836 296 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 CLSTN2Q9H4D0 955 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 CLIP2Q9UDT6 1046 aa11.1□□□□□ -0.63
NECAP1-215ENST00000639071 ELP1O95163 1332 aa11.09□□□□□ -0.63
NECAP1-215ENST00000639071 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
NECAP1-215ENST00000639071 TPM3P06753 285 aa11.09□□□□□ -0.63
NECAP1-215ENST00000639071 ANKRD1Q15327 319 aa11.09□□□□□ -0.63
NECAP1-215ENST00000639071 ZSCAN25Q6NSZ9 544 aa11.09□□□□□ -0.63
NECAP1-215ENST00000639071 DDX46Q7L014 1031 aaKnown RBP11.09□□□□□ -0.63
NECAP1-215ENST00000639071 ZSCAN20P17040 1043 aaPredicted RBP11.09□□□□□ -0.63
NECAP1-215ENST00000639071 MED23Q9ULK4 1368 aa11.08□□□□□ -0.64
NECAP1-215ENST00000639071 GUCY1B3Q02153 619 aa11.08□□□□□ -0.64
NECAP1-215ENST00000639071 TFCP2Q12800 502 aa11.08□□□□□ -0.64
NECAP1-215ENST00000639071 CACTINQ8WUQ7 758 aaKnown RBP11.08□□□□□ -0.64
NECAP1-215ENST00000639071 NEK1Q96PY6 1258 aa11.08□□□□□ -0.64
NECAP1-215ENST00000639071 DDX19AQ9NUU7 478 aaKnown RBP11.08□□□□□ -0.64
NECAP1-215ENST00000639071 DBNLQ9UJU6 430 aaKnown RBP11.08□□□□□ -0.64
NECAP1-215ENST00000639071 MED1Q15648 1581 aaPredicted RBP11.08□□□□□ -0.64
NECAP1-215ENST00000639071 DDX58O95786 925 aaKnown RBP11.08□□□□□ -0.64
NECAP1-215ENST00000639071 TNNT1P13805 278 aa11.08□□□□□ -0.64
NECAP1-215ENST00000639071 CCT2P78371 535 aaKnown RBP11.08□□□□□ -0.64
NECAP1-215ENST00000639071 TPD52L1Q16890 204 aaPredicted RBP11.08□□□□□ -0.64
NECAP1-215ENST00000639071 C11orf57Q6ZUT1 292 aaPredicted RBP11.08□□□□□ -0.64
NECAP1-215ENST00000639071 XAGE3Q8WTP9 111 aa11.08□□□□□ -0.64
NECAP1-215ENST00000639071 GTF3C6Q969F1 213 aa11.08□□□□□ -0.64
NECAP1-215ENST00000639071 A0A0G2JLW4 131 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 CYP21A2P08686 494 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 RESTQ13127 1097 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 PDIA6Q15084 440 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 COPS6Q7L5N1 327 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 CHST3Q7LGC8 479 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 PLA2G4DQ86XP0 818 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 ANKRD24Q8TF21 1146 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 TAOK2Q9UL54 1235 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 ATP5J2-PTCD1G3V325 749 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 PTCD1O75127 700 aaKnown RBP11.07□□□□□ -0.64
NECAP1-215ENST00000639071 SCRN1Q12765 414 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 THEMISQ8N1K5 641 aaPredicted RBP11.07□□□□□ -0.64
NECAP1-215ENST00000639071 DBNDD2Q9BQY9 259 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 CHMP4AQ9BY43 222 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 NCOA5Q9HCD5 579 aaKnown RBP11.07□□□□□ -0.64
NECAP1-215ENST00000639071 DDX21Q9NR30 783 aaKnown RBP eCLIP11.07□□□□□ -0.64
NECAP1-215ENST00000639071 AXIN2Q9Y2T1 843 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 USP16Q9Y5T5 823 aa11.07□□□□□ -0.64
NECAP1-215ENST00000639071 USP27XA6NNY8 438 aa11.06□□□□□ -0.64
NECAP1-215ENST00000639071 NEURL1BA8MQ27 555 aa11.06□□□□□ -0.64
NECAP1-215ENST00000639071 NCBP1Q09161 790 aaKnown RBP11.06□□□□□ -0.64
NECAP1-215ENST00000639071 NEXNQ0ZGT2 675 aa11.06□□□□□ -0.64
NECAP1-215ENST00000639071 UBE3BQ7Z3V4 1068 aa11.06□□□□□ -0.64
NECAP1-215ENST00000639071 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.06□□□□□ -0.64
NECAP1-215ENST00000639071 V9GYY5 206 aaPredicted RBP11.06□□□□□ -0.64
NECAP1-215ENST00000639071 ANKARQ7Z5J8 1434 aa11.06□□□□□ -0.64
NECAP1-215ENST00000639071 GOLGA6L19H0YKK7 550 aa11.06□□□□□ -0.64
NECAP1-215ENST00000639071 DMTNQ08495 405 aa11.06□□□□□ -0.64
NECAP1-215ENST00000639071 APOBRQ0VD83 1088 aa11.06□□□□□ -0.64
NECAP1-215ENST00000639071 GCKRQ14397 625 aa11.06□□□□□ -0.64
NECAP1-215ENST00000639071 STOX1Q6ZVD7 989 aa11.06□□□□□ -0.64
NECAP1-215ENST00000639071 FILIP1Q7Z7B0 1213 aa11.06□□□□□ -0.64
NECAP1-215ENST00000639071 TDRD7Q8NHU6 1098 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms