RNA–Protein interactions for RNA: ENST00000638914.1

PAX6-245, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 7,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-245ENST00000638914 SNRKQ9NRH2 765 aa13.52□□□□□ -0.24
PAX6-245ENST00000638914 F8W031 263 aaPredicted RBP13.52□□□□□ -0.24
PAX6-245ENST00000638914 USO1O60763 962 aaKnown RBP13.52□□□□□ -0.24
PAX6-245ENST00000638914 PCF11O94913 1555 aaKnown RBP13.52□□□□□ -0.24
PAX6-245ENST00000638914 CALM1P0DP23 149 aa13.52□□□□□ -0.24
PAX6-245ENST00000638914 CALM2P0DP24 149 aa13.52□□□□□ -0.24
PAX6-245ENST00000638914 CALM3P0DP25 149 aa13.52□□□□□ -0.24
PAX6-245ENST00000638914 LINS1Q8NG48 757 aa13.52□□□□□ -0.24
PAX6-245ENST00000638914 ACTN2P35609 894 aa13.52□□□□□ -0.24
PAX6-245ENST00000638914 SMARCC2Q8TAQ2 1214 aa13.52□□□□□ -0.24
PAX6-245ENST00000638914 NKTRP30414 1462 aaKnown RBP13.52□□□□□ -0.25
PAX6-245ENST00000638914 LDHBP07195 334 aaKnown RBP13.52□□□□□ -0.25
PAX6-245ENST00000638914 PLVAPQ9BX97 442 aa13.52□□□□□ -0.25
PAX6-245ENST00000638914 DPY19L2Q6NUT2 758 aa13.52□□□□□ -0.25
PAX6-245ENST00000638914 CALML3P27482 149 aa13.52□□□□□ -0.25
PAX6-245ENST00000638914 COMMD10Q9Y6G5 202 aa13.52□□□□□ -0.25
PAX6-245ENST00000638914 TCERG1LQ5VWI1 586 aa13.51□□□□□ -0.25
PAX6-245ENST00000638914 TAOK3Q9H2K8 898 aa13.51□□□□□ -0.25
PAX6-245ENST00000638914 CNNM3Q8NE01 707 aa13.51□□□□□ -0.25
PAX6-245ENST00000638914 ARHGAP45Q92619 1136 aa13.51□□□□□ -0.25
PAX6-245ENST00000638914 TMOD4Q9NZQ9 345 aa13.51□□□□□ -0.25
PAX6-245ENST00000638914 CCDC117Q8IWD4 279 aaPredicted RBP13.51□□□□□ -0.25
PAX6-245ENST00000638914 NOD1Q9Y239 953 aa13.51□□□□□ -0.25
PAX6-245ENST00000638914 TAF12Q16514 161 aa13.51□□□□□ -0.25
PAX6-245ENST00000638914 CCDC83Q8IWF9 413 aa13.51□□□□□ -0.25
PAX6-245ENST00000638914 GTPBP4Q9BZE4 634 aaKnown RBP13.51□□□□□ -0.25
PAX6-245ENST00000638914 CCDC40Q4G0X9 1142 aa13.51□□□□□ -0.25
PAX6-245ENST00000638914 KIF2AO00139 706 aaPredicted RBP13.5□□□□□ -0.25
PAX6-245ENST00000638914 GPHNQ9NQX3 736 aaPredicted RBP13.5□□□□□ -0.25
PAX6-245ENST00000638914 TCHPQ9BT92 498 aa13.5□□□□□ -0.25
PAX6-245ENST00000638914 SKIDA1Q1XH10 827 aa13.5□□□□□ -0.25
PAX6-245ENST00000638914 MICU3Q86XE3 530 aa13.5□□□□□ -0.25
PAX6-245ENST00000638914 GJA3Q9Y6H8 435 aa13.5□□□□□ -0.25
PAX6-245ENST00000638914 TCIRG1Q13488 830 aa13.5□□□□□ -0.25
PAX6-245ENST00000638914 USP21Q9UK80 565 aa13.5□□□□□ -0.25
PAX6-245ENST00000638914 LMBR1LQ6UX01 489 aa13.5□□□□□ -0.25
PAX6-245ENST00000638914 SLC4A4Q9Y6R1 1079 aa13.5□□□□□ -0.25
PAX6-245ENST00000638914 IRS4O14654 1257 aaPredicted RBP13.5□□□□□ -0.25
PAX6-245ENST00000638914 KLHL10Q6JEL2 608 aa13.5□□□□□ -0.25
PAX6-245ENST00000638914 TAX1BP1Q86VP1 789 aa13.5□□□□□ -0.25
PAX6-245ENST00000638914 NEK1Q96PY6 1258 aa13.5□□□□□ -0.25
PAX6-245ENST00000638914 ORC3Q9UBD5 711 aaPredicted RBP13.5□□□□□ -0.25
PAX6-245ENST00000638914 ITSN2Q9NZM3 1697 aa13.49□□□□□ -0.25
PAX6-245ENST00000638914 GSTTP1A0A1W2PQM5 241 aa13.49□□□□□ -0.25
PAX6-245ENST00000638914 RALGAPBQ86X10 1494 aa13.49□□□□□ -0.25
PAX6-245ENST00000638914 MTIF2P46199 727 aaKnown RBP13.49□□□□□ -0.25
PAX6-245ENST00000638914 GPR162Q16538 588 aa13.49□□□□□ -0.25
PAX6-245ENST00000638914 CABLES1Q8TDN4 633 aa13.49□□□□□ -0.25
PAX6-245ENST00000638914 HOMER2Q9NSB8 354 aa13.49□□□□□ -0.25
PAX6-245ENST00000638914 RMND1Q9NWS8 449 aa13.49□□□□□ -0.25
PAX6-245ENST00000638914 ZBTB43O43298 467 aa13.49□□□□□ -0.25
PAX6-245ENST00000638914 PHACTR2O75167 634 aa13.49□□□□□ -0.25
PAX6-245ENST00000638914 PICALMQ13492 652 aa13.49□□□□□ -0.25
PAX6-245ENST00000638914 NFATC2IPQ8NCF5 419 aa13.49□□□□□ -0.25
PAX6-245ENST00000638914 IP6K1Q92551 441 aa13.49□□□□□ -0.25
PAX6-245ENST00000638914 RBM25P49756 843 aaKnown RBP13.49□□□□□ -0.25
PAX6-245ENST00000638914 MAGEB6P1A0A0J9YX57 407 aa13.48□□□□□ -0.25
PAX6-245ENST00000638914 KRT13P13646 458 aa13.48□□□□□ -0.25
PAX6-245ENST00000638914 CHPF2Q9P2E5 772 aa13.48□□□□□ -0.25
PAX6-245ENST00000638914 ALDH1B1P30837 517 aa13.48□□□□□ -0.25
PAX6-245ENST00000638914 TSPYL1Q9H0U9 437 aa13.48□□□□□ -0.25
PAX6-245ENST00000638914 BICRAQ9NZM4 1560 aa13.48□□□□□ -0.25
PAX6-245ENST00000638914 GBP3Q9H0R5 595 aa13.48□□□□□ -0.25
PAX6-245ENST00000638914 PAFAH1B1P43034 410 aa13.48□□□□□ -0.25
PAX6-245ENST00000638914 LARGE2Q8N3Y3 721 aa13.48□□□□□ -0.25
PAX6-245ENST00000638914 NAP1L4Q99733 375 aaKnown RBP13.48□□□□□ -0.25
PAX6-245ENST00000638914 H7C1D1 291 aa13.48□□□□□ -0.25
PAX6-245ENST00000638914 ZSCAN12O43309 604 aa13.48□□□□□ -0.25
PAX6-245ENST00000638914 GNA11P29992 359 aa13.48□□□□□ -0.25
PAX6-245ENST00000638914 DDX12PQ92771 950 aa13.48□□□□□ -0.25
PAX6-245ENST00000638914 SFPQP23246 707 aaKnown RBP eCLIP13.48□□□□□ -0.25
PAX6-245ENST00000638914 DENND2AQ9ULE3 1009 aa13.48□□□□□ -0.25
PAX6-245ENST00000638914 TDRD12Q587J7 1177 aaKnown RBP13.47□□□□□ -0.25
PAX6-245ENST00000638914 SYNCQ9H7C4 482 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 SLAIN2Q9P270 581 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 SH3TC1Q8TE82 1336 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 GPATCH8Q9UKJ3 1502 aaKnown RBP13.47□□□□□ -0.25
PAX6-245ENST00000638914 PRC1O43663 620 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 STAMBPO95630 424 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 USP8P40818 1118 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 ARHGEF10LQ9HCE6 1279 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 SPC24Q8NBT2 197 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 YEATS4O95619 227 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 RFX1P22670 979 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 SLC39A6Q13433 755 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 GLT8D2Q9H1C3 349 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 SLC5A4Q9NY91 659 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 RTN1Q16799 776 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 GIGYF2Q6Y7W6 1299 aaKnown RBP13.47□□□□□ -0.25
PAX6-245ENST00000638914 TRMT1LQ7Z2T5 733 aaKnown RBP13.47□□□□□ -0.25
PAX6-245ENST00000638914 MBIPQ9NS73 344 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 ATP10BO94823 1461 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 RAPGEF6Q8TEU7 1601 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 DKC1O60832 514 aaKnown RBP eCLIP13.47□□□□□ -0.25
PAX6-245ENST00000638914 IFI16Q16666 785 aaKnown RBP13.47□□□□□ -0.25
PAX6-245ENST00000638914 SLC9C2Q5TAH2 1124 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 MSANTD4Q8NCY6 345 aa13.47□□□□□ -0.25
PAX6-245ENST00000638914 PUF60Q9UHX1 559 aaKnown RBP13.47□□□□□ -0.25
PAX6-245ENST00000638914 CAVIN2O95810 425 aa13.46□□□□□ -0.25
PAX6-245ENST00000638914 TBC1D5Q92609 795 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms