RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 KIF3AQ9Y496 699 aa11.94□□□□□ -0.5
SMARCA2-265ENST00000638139 PDIA6Q15084 440 aa11.93□□□□□ -0.5
SMARCA2-265ENST00000638139 TSGA10IPQ3SY00 556 aa11.93□□□□□ -0.5
SMARCA2-265ENST00000638139 LEO1Q8WVC0 666 aaPredicted RBP11.93□□□□□ -0.5
SMARCA2-265ENST00000638139 CBX8Q9HC52 389 aa11.93□□□□□ -0.5
SMARCA2-265ENST00000638139 HMG20BQ9P0W2 317 aa11.93□□□□□ -0.5
SMARCA2-265ENST00000638139 TAF5LO75529 589 aa11.93□□□□□ -0.5
SMARCA2-265ENST00000638139 PTGS1P23219 599 aa11.93□□□□□ -0.5
SMARCA2-265ENST00000638139 ANO6Q4KMQ2 910 aa11.93□□□□□ -0.5
SMARCA2-265ENST00000638139 EDC3Q96F86 508 aaKnown RBP11.93□□□□□ -0.5
SMARCA2-265ENST00000638139 MRC1P22897 1456 aa11.92□□□□□ -0.5
SMARCA2-265ENST00000638139 GOLGA6L4A6NEF3 574 aa11.92□□□□□ -0.5
SMARCA2-265ENST00000638139 RBM43Q6ZSC3 357 aaKnown RBP11.92□□□□□ -0.5
SMARCA2-265ENST00000638139 CLSTN2Q9H4D0 955 aa11.92□□□□□ -0.5
SMARCA2-265ENST00000638139 DDX19AQ9NUU7 478 aaKnown RBP11.92□□□□□ -0.5
SMARCA2-265ENST00000638139 NPHP3Q7Z494 1330 aa11.92□□□□□ -0.5
SMARCA2-265ENST00000638139 ESCO1Q5FWF5 840 aa11.92□□□□□ -0.5
SMARCA2-265ENST00000638139 EPHA10Q5JZY3 1008 aa11.92□□□□□ -0.5
SMARCA2-265ENST00000638139 RIC3Q7Z5B4 369 aa11.92□□□□□ -0.5
SMARCA2-265ENST00000638139 ARHGEF25Q86VW2 580 aa11.92□□□□□ -0.5
SMARCA2-265ENST00000638139 JAK2O60674 1132 aa11.91□□□□□ -0.5
SMARCA2-265ENST00000638139 COL15A1P39059 1388 aa11.91□□□□□ -0.5
SMARCA2-265ENST00000638139 USPL1Q5W0Q7 1092 aa11.91□□□□□ -0.5
SMARCA2-265ENST00000638139 ANKRD24Q8TF21 1146 aa11.91□□□□□ -0.5
SMARCA2-265ENST00000638139 PGBD1Q96JS3 809 aa11.91□□□□□ -0.5
SMARCA2-265ENST00000638139 BCL2L12Q9HB09 334 aa11.91□□□□□ -0.5
SMARCA2-265ENST00000638139 C5P01031 1676 aa11.91□□□□□ -0.5
SMARCA2-265ENST00000638139 NEURL1BA8MQ27 555 aa11.91□□□□□ -0.5
SMARCA2-265ENST00000638139 RIOK3O14730 519 aaKnown RBP11.91□□□□□ -0.5
SMARCA2-265ENST00000638139 GCP02774 474 aa11.91□□□□□ -0.5
SMARCA2-265ENST00000638139 SMAP1Q8IYB5 467 aaPredicted RBP11.91□□□□□ -0.5
SMARCA2-265ENST00000638139 GTF3C6Q969F1 213 aa11.91□□□□□ -0.5
SMARCA2-265ENST00000638139 ADAMTS7Q9UKP4 1686 aa11.9□□□□□ -0.5
SMARCA2-265ENST00000638139 NR1I2O75469 434 aa11.9□□□□□ -0.5
SMARCA2-265ENST00000638139 RESTQ13127 1097 aa11.9□□□□□ -0.5
SMARCA2-265ENST00000638139 GCKRQ14397 625 aa11.9□□□□□ -0.5
SMARCA2-265ENST00000638139 KRT32Q14532 448 aa11.9□□□□□ -0.5
SMARCA2-265ENST00000638139 CCDC186Q7Z3E2 898 aa11.9□□□□□ -0.5
SMARCA2-265ENST00000638139 CAMTA1Q9Y6Y1 1673 aa11.9□□□□□ -0.5
SMARCA2-265ENST00000638139 ATP5JP18859 108 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 ZNF75DP51815 510 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 CHAF1AQ13111 956 aaPredicted RBP11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 PLA2G4DQ86XP0 818 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 TDRD7Q8NHU6 1098 aaKnown RBP11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 BRF1Q92994 677 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 NEK1Q96PY6 1258 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 NRBP1Q9UHY1 535 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 DBNLQ9UJU6 430 aaKnown RBP11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 PRDM4Q9UKN5 801 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 MYH15Q9Y2K3 1946 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 MYL6BP14649 208 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 NEXNQ0ZGT2 675 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 LRMPQ12912 555 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 SLC39A6Q13433 755 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 Q6ZUG5 572 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 BICD2Q8TD16 824 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 XAGE3Q8WTP9 111 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 MYD88Q99836 296 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 NDUFB9Q9Y6M9 179 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 SLIT3O75094 1523 aa11.89□□□□□ -0.51
SMARCA2-265ENST00000638139 LAMA4Q16363 1823 aa11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 RGPD5Q99666 1765 aa11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 CHGBP05060 677 aa11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 CCDC129Q6ZRS4 1044 aa11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 DRC7Q8IY82 874 aa11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 DDX11Q96FC9 970 aa11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 TRIM5Q9C035 493 aa11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 DNAJC25Q9H1X3 360 aa11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 COPRSQ9NQ92 184 aa11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 AXIN2Q9Y2T1 843 aa11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 ZNF609O15014 1411 aa11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 RFX5P48382 616 aaPredicted RBP11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 TFCP2Q12800 502 aa11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 TNNI3KQ59H18 835 aa11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 SEC62Q99442 399 aaKnown RBP11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 METTL22Q9BUU2 404 aaPredicted RBP11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 FPGT-TNNI3KV9GXZ4 949 aa11.88□□□□□ -0.51
SMARCA2-265ENST00000638139 ZNF165P49910 485 aa11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 ZNF790Q6PG37 636 aa11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 COPS6Q7L5N1 327 aa11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 PRDM10Q9NQV6 1147 aa11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 U3KPZ7 1027 aaPredicted RBP11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 AFDNP55196 1824 aaKnown RBP11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 H3BQV1 296 aa11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 CYP21A2P08686 494 aa11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 HSP90B1P14625 803 aaKnown RBP11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 PTPN12Q05209 780 aaKnown RBP11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 PPP4R3BQ5MIZ7 849 aa11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 ZSCAN25Q6NSZ9 544 aa11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 SCN11AQ9UI33 1791 aa11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 LMTK3Q96Q04 1460 aa11.87□□□□□ -0.51
SMARCA2-265ENST00000638139 CTIFO43310 598 aaKnown RBP11.86□□□□□ -0.51
SMARCA2-265ENST00000638139 SCRN1Q12765 414 aa11.86□□□□□ -0.51
SMARCA2-265ENST00000638139 ATP2B3Q16720 1220 aa11.86□□□□□ -0.51
SMARCA2-265ENST00000638139 ANKRD7Q92527 254 aa11.86□□□□□ -0.51
SMARCA2-265ENST00000638139 DNAJC2Q99543 621 aaKnown RBP11.86□□□□□ -0.51
SMARCA2-265ENST00000638139 LRRC2Q9BYS8 371 aa11.86□□□□□ -0.51
SMARCA2-265ENST00000638139 ZSCAN16Q9H4T2 348 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms