RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 EYA2O00167 538 aa25.81■■□□□ 1.72
CLN6-224ENST00000638076 RTN4Q9NQC3 1192 aaKnown RBP25.81■■□□□ 1.72
CLN6-224ENST00000638076 ROBO1Q9Y6N7 1651 aa25.81■■□□□ 1.72
CLN6-224ENST00000638076 GPR108Q9NPR9 543 aa25.8■■□□□ 1.72
CLN6-224ENST00000638076 LARGE1O95461 756 aa25.8■■□□□ 1.72
CLN6-224ENST00000638076 TIMM10P62072 90 aa25.8■■□□□ 1.72
CLN6-224ENST00000638076 RNF20Q5VTR2 975 aa25.8■■□□□ 1.72
CLN6-224ENST00000638076 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.8■■□□□ 1.72
CLN6-224ENST00000638076 ITGB4P16144 1822 aa25.8■■□□□ 1.72
CLN6-224ENST00000638076 RFX7Q2KHR2 1363 aa25.79■■□□□ 1.72
CLN6-224ENST00000638076 JCADQ9P266 1359 aa25.79■■□□□ 1.72
CLN6-224ENST00000638076 TAF5LO75529 589 aa25.79■■□□□ 1.72
CLN6-224ENST00000638076 TRIM28Q13263 835 aaKnown RBP25.79■■□□□ 1.72
CLN6-224ENST00000638076 CAVIN1Q6NZI2 390 aaKnown RBP25.79■■□□□ 1.72
CLN6-224ENST00000638076 RPAP1Q9BWH6 1393 aaPredicted RBP25.79■■□□□ 1.72
CLN6-224ENST00000638076 EXOC5O00471 708 aa25.79■■□□□ 1.72
CLN6-224ENST00000638076 DDX46Q7L014 1031 aaKnown RBP25.79■■□□□ 1.72
CLN6-224ENST00000638076 BCL9O00512 1426 aa25.78■■□□□ 1.72
CLN6-224ENST00000638076 WDR33Q9C0J8 1336 aaKnown RBP25.78■■□□□ 1.72
CLN6-224ENST00000638076 PSMA5P28066 241 aa25.78■■□□□ 1.72
CLN6-224ENST00000638076 GPT2Q8TD30 523 aa25.78■■□□□ 1.72
CLN6-224ENST00000638076 CIAO1O76071 339 aa25.77■■□□□ 1.72
CLN6-224ENST00000638076 CHGBP05060 677 aa25.77■■□□□ 1.72
CLN6-224ENST00000638076 PUS3Q9BZE2 481 aaKnown RBP25.77■■□□□ 1.72
CLN6-224ENST00000638076 FAM89AQ96GI7 184 aa25.77■■□□□ 1.72
CLN6-224ENST00000638076 ZSCAN31Q96LW9 406 aaPredicted RBP25.77■■□□□ 1.72
CLN6-224ENST00000638076 SLC4A9Q96Q91 983 aa25.77■■□□□ 1.72
CLN6-224ENST00000638076 CCDC57Q2TAC2 916 aa25.76■■□□□ 1.71
CLN6-224ENST00000638076 SYTL4Q96C24 671 aaPredicted RBP25.76■■□□□ 1.71
CLN6-224ENST00000638076 MAP3K15Q6ZN16 1313 aa25.76■■□□□ 1.71
CLN6-224ENST00000638076 COL16A1Q07092 1604 aaPredicted RBP25.76■■□□□ 1.71
CLN6-224ENST00000638076 ZNF609O15014 1411 aa25.76■■□□□ 1.71
CLN6-224ENST00000638076 PCCAP05165 728 aaPredicted RBP25.76■■□□□ 1.71
CLN6-224ENST00000638076 CCDC83Q8IWF9 413 aa25.76■■□□□ 1.71
CLN6-224ENST00000638076 KBTBD3Q8NAB2 608 aa25.76■■□□□ 1.71
CLN6-224ENST00000638076 SH2B1Q9NRF2 756 aaPredicted RBP25.76■■□□□ 1.71
CLN6-224ENST00000638076 SMC3Q9UQE7 1217 aa25.76■■□□□ 1.71
CLN6-224ENST00000638076 SEC62Q99442 399 aaKnown RBP25.75■■□□□ 1.71
CLN6-224ENST00000638076 HMG20BQ9P0W2 317 aa25.75■■□□□ 1.71
CLN6-224ENST00000638076 TAF6LQ9Y6J9 622 aa25.75■■□□□ 1.71
CLN6-224ENST00000638076 COL9A3Q14050 684 aaPredicted RBP25.75■■□□□ 1.71
CLN6-224ENST00000638076 GIGYF2Q6Y7W6 1299 aaKnown RBP25.75■■□□□ 1.71
CLN6-224ENST00000638076 AHDC1Q5TGY3 1603 aaPredicted RBP25.74■■□□□ 1.71
CLN6-224ENST00000638076 A0A1B0GUL7 405 aa25.74■■□□□ 1.71
CLN6-224ENST00000638076 CCDC129Q6ZRS4 1044 aa25.74■■□□□ 1.71
CLN6-224ENST00000638076 ZBTB38Q8NAP3 1195 aaPredicted RBP25.74■■□□□ 1.71
CLN6-224ENST00000638076 PAG1Q9NWQ8 432 aa25.74■■□□□ 1.71
CLN6-224ENST00000638076 GOLIM4O00461 696 aa25.74■■□□□ 1.71
CLN6-224ENST00000638076 CYP19A1P11511 503 aaPredicted RBP25.74■■□□□ 1.71
CLN6-224ENST00000638076 HLFQ16534 295 aa25.74■■□□□ 1.71
CLN6-224ENST00000638076 ZSCAN23Q3MJ62 389 aa25.74■■□□□ 1.71
CLN6-224ENST00000638076 FOXD4L6Q3SYB3 417 aaPredicted RBP25.74■■□□□ 1.71
CLN6-224ENST00000638076 MCMDC2Q4G0Z9 681 aa25.74■■□□□ 1.71
CLN6-224ENST00000638076 USPL1Q5W0Q7 1092 aa25.74■■□□□ 1.71
CLN6-224ENST00000638076 BLOC1S2Q6QNY1 142 aa25.74■■□□□ 1.71
CLN6-224ENST00000638076 FOXD4L3Q6VB84 417 aaPredicted RBP25.74■■□□□ 1.71
CLN6-224ENST00000638076 COL22A1Q8NFW1 1626 aaPredicted RBP25.73■■□□□ 1.71
CLN6-224ENST00000638076 ME3Q16798 604 aa25.73■■□□□ 1.71
CLN6-224ENST00000638076 CCDC85AQ96PX6 553 aaPredicted RBP25.73■■□□□ 1.71
CLN6-224ENST00000638076 PLCH1Q4KWH8 1693 aa25.73■■□□□ 1.71
CLN6-224ENST00000638076 TSGA10IPQ3SY00 556 aa25.72■■□□□ 1.71
CLN6-224ENST00000638076 PLA2G12BQ9BX93 195 aa25.72■■□□□ 1.71
CLN6-224ENST00000638076 CEP126Q9P2H0 1117 aa25.72■■□□□ 1.71
CLN6-224ENST00000638076 SYT1P21579 422 aa25.72■■□□□ 1.71
CLN6-224ENST00000638076 TPCN1Q9ULQ1 816 aa25.72■■□□□ 1.71
CLN6-224ENST00000638076 LRP6O75581 1613 aa25.72■■□□□ 1.71
CLN6-224ENST00000638076 PALLDQ8WX93 1383 aa25.72■■□□□ 1.71
CLN6-224ENST00000638076 STX6O43752 255 aa25.71■■□□□ 1.71
CLN6-224ENST00000638076 ZNF445P59923 1031 aa25.71■■□□□ 1.71
CLN6-224ENST00000638076 ZBTB1Q9Y2K1 713 aa25.71■■□□□ 1.71
CLN6-224ENST00000638076 KAT6BQ8WYB5 2073 aa25.71■■□□□ 1.71
CLN6-224ENST00000638076 GPTP24298 496 aa25.71■■□□□ 1.71
CLN6-224ENST00000638076 RBM27Q9P2N5 1060 aaKnown RBP25.71■■□□□ 1.71
CLN6-224ENST00000638076 NSFL1CQ9UNZ2 370 aaKnown RBP25.71■■□□□ 1.71
CLN6-224ENST00000638076 RPS6KB1P23443 525 aa25.7■■□□□ 1.71
CLN6-224ENST00000638076 GJB2P29033 226 aa25.7■■□□□ 1.71
CLN6-224ENST00000638076 ST3GAL1Q11201 340 aa25.7■■□□□ 1.71
CLN6-224ENST00000638076 TCEANC2Q96MN5 208 aa25.7■■□□□ 1.71
CLN6-224ENST00000638076 SH3TC1Q8TE82 1336 aa25.7■■□□□ 1.7
CLN6-224ENST00000638076 CSF1RP07333 972 aa25.7■■□□□ 1.7
CLN6-224ENST00000638076 IFIT1P09914 478 aaKnown RBP25.7■■□□□ 1.7
CLN6-224ENST00000638076 ZSCAN22P10073 491 aaPredicted RBP25.7■■□□□ 1.7
CLN6-224ENST00000638076 PRIM1P49642 420 aaKnown RBP25.7■■□□□ 1.7
CLN6-224ENST00000638076 SYNE4Q8N205 404 aa25.7■■□□□ 1.7
CLN6-224ENST00000638076 FBXO3Q9UK99 471 aa25.7■■□□□ 1.7
CLN6-224ENST00000638076 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.69■■□□□ 1.7
CLN6-224ENST00000638076 NLRP10Q86W26 655 aa25.69■■□□□ 1.7
CLN6-224ENST00000638076 MBD3O95983 291 aa25.69■■□□□ 1.7
CLN6-224ENST00000638076 IFIT5Q13325 482 aaKnown RBP25.69■■□□□ 1.7
CLN6-224ENST00000638076 TAF7LQ5H9L4 462 aa25.69■■□□□ 1.7
CLN6-224ENST00000638076 NECAB1Q8N987 351 aa25.69■■□□□ 1.7
CLN6-224ENST00000638076 U3KPZ7 1027 aaPredicted RBP25.69■■□□□ 1.7
CLN6-224ENST00000638076 ANKRD1Q15327 319 aa25.68■■□□□ 1.7
CLN6-224ENST00000638076 HSP90AB3PQ58FF7 597 aa25.68■■□□□ 1.7
CLN6-224ENST00000638076 ALDH8A1Q9H2A2 487 aaPredicted RBP25.68■■□□□ 1.7
CLN6-224ENST00000638076 DTNBO60941 627 aa25.68■■□□□ 1.7
CLN6-224ENST00000638076 ADAMTS2O95450 1211 aa25.68■■□□□ 1.7
CLN6-224ENST00000638076 KRT32Q14532 448 aa25.68■■□□□ 1.7
CLN6-224ENST00000638076 SLFNL1Q499Z3 407 aa25.68■■□□□ 1.7
CLN6-224ENST00000638076 GDPD2Q9HCC8 539 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms