RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 LAMB4A4D0S4 1761 aa15.13■□□□□ 0.01
TCF4-289ENST00000637941 KDM6AO15550 1401 aaPredicted RBP15.13■□□□□ 0.01
TCF4-289ENST00000637941 PHKG2P15735 406 aa15.13■□□□□ 0.01
TCF4-289ENST00000637941 ZC3H6P61129 1189 aaKnown RBP15.13■□□□□ 0.01
TCF4-289ENST00000637941 ANKRD13DQ6ZTN6 518 aa15.13■□□□□ 0.01
TCF4-289ENST00000637941 ARFGEF2Q9Y6D5 1785 aa15.12■□□□□ 0.01
TCF4-289ENST00000637941 GOLGA6L6A8MZA4 724 aa15.12■□□□□ 0.01
TCF4-289ENST00000637941 DYNC1I1O14576 645 aa15.12■□□□□ 0.01
TCF4-289ENST00000637941 ST3GAL1Q11201 340 aa15.12■□□□□ 0.01
TCF4-289ENST00000637941 USPL1Q5W0Q7 1092 aa15.12■□□□□ 0.01
TCF4-289ENST00000637941 COPS6Q7L5N1 327 aa15.12■□□□□ 0.01
TCF4-289ENST00000637941 TLR7Q9NYK1 1049 aaKnown RBP15.12■□□□□ 0.01
TCF4-289ENST00000637941 U3KPZ7 1027 aaPredicted RBP15.12■□□□□ 0.01
TCF4-289ENST00000637941 XIRP1Q702N8 1843 aaKnown RBP15.12■□□□□ 0.01
TCF4-289ENST00000637941 TNS3Q68CZ2 1445 aa15.12■□□□□ 0.01
TCF4-289ENST00000637941 UQCRHLA0A096LP55 91 aa15.11■□□□□ 0.01
TCF4-289ENST00000637941 GOLGA6L4A6NEF3 574 aa15.11■□□□□ 0.01
TCF4-289ENST00000637941 UQCRHP07919 91 aa15.11■□□□□ 0.01
TCF4-289ENST00000637941 MYL6BP14649 208 aa15.11■□□□□ 0.01
TCF4-289ENST00000637941 NECAB1Q8N987 351 aa15.11■□□□□ 0.01
TCF4-289ENST00000637941 PIBF1Q8WXW3 757 aa15.11■□□□□ 0.01
TCF4-289ENST00000637941 FMNL2Q96PY5 1086 aa15.11■□□□□ 0.01
TCF4-289ENST00000637941 PKD1L3Q7Z443 1732 aa15.11■□□□□ 0.01
TCF4-289ENST00000637941 TNNI3KQ59H18 835 aa15.11■□□□□ 0.01
TCF4-289ENST00000637941 DCAF5Q96JK2 942 aa15.11■□□□□ 0.01
TCF4-289ENST00000637941 NLRP2Q9NX02 1062 aa15.11■□□□□ 0.01
TCF4-289ENST00000637941 FPGT-TNNI3KV9GXZ4 949 aa15.11■□□□□ 0.01
TCF4-289ENST00000637941 TAF5LO75529 589 aa15.1■□□□□ 0.01
TCF4-289ENST00000637941 MAP3K11Q16584 847 aa15.1■□□□□ 0.01
TCF4-289ENST00000637941 RABL6Q3YEC7 729 aaPredicted RBP15.1■□□□□ 0.01
TCF4-289ENST00000637941 NUP62CLQ9H1M0 184 aa15.1■□□□□ 0.01
TCF4-289ENST00000637941 PARP4Q9UKK3 1724 aaKnown RBP15.1■□□□□ 0.01
TCF4-289ENST00000637941 SLC39A6Q13433 755 aa15.1■□□□□ 0.01
TCF4-289ENST00000637941 GIMAP6Q6P9H5 292 aa15.1■□□□□ 0.01
TCF4-289ENST00000637941 DDX19AQ9NUU7 478 aaKnown RBP15.1■□□□□ 0.01
TCF4-289ENST00000637941 SPATA31A3Q5VYP0 1347 aa15.09■□□□□ 0.01
TCF4-289ENST00000637941 HMGB1P09429 215 aaKnown RBP15.09■□□□□ 0.01
TCF4-289ENST00000637941 HMGN5P82970 282 aaKnown RBP15.09■□□□□ 0.01
TCF4-289ENST00000637941 TOB2Q14106 344 aaPredicted RBP15.09■□□□□ 0.01
TCF4-289ENST00000637941 NFATC2IPQ8NCF5 419 aa15.09■□□□□ 0.01
TCF4-289ENST00000637941 CHMP4CQ96CF2 233 aa15.09■□□□□ 0.01
TCF4-289ENST00000637941 PRIMPOLQ96LW4 560 aa15.09■□□□□ 0.01
TCF4-289ENST00000637941 NEK1Q96PY6 1258 aa15.09■□□□□ 0.01
TCF4-289ENST00000637941 ZNF335Q9H4Z2 1342 aaPredicted RBP15.09■□□□□ 0.01
TCF4-289ENST00000637941 COL18A1P39060 1754 aa15.08■□□□□ 0.01
TCF4-289ENST00000637941 RFX5P48382 616 aaPredicted RBP15.08■□□□□ 0.01
TCF4-289ENST00000637941 DNTTIP2Q5QJE6 756 aaKnown RBP15.08■□□□□ 0.01
TCF4-289ENST00000637941 CDC37L1Q7L3B6 337 aa15.08■□□□□ 0.01
TCF4-289ENST00000637941 FAM200AQ8TCP9 573 aa15.08■□□□□ 0.01
TCF4-289ENST00000637941 KIF3AQ9Y496 699 aa15.08■□□□□ 0.01
TCF4-289ENST00000637941 PTPN12Q05209 780 aaKnown RBP15.08■□□□□ 0
TCF4-289ENST00000637941 MCMDC2Q4G0Z9 681 aa15.08■□□□□ 0
TCF4-289ENST00000637941 BRINP3Q76B58 766 aa15.08■□□□□ 0
TCF4-289ENST00000637941 TTC6Q86TZ1 520 aa15.08■□□□□ 0
TCF4-289ENST00000637941 ZNF496Q96IT1 587 aaPredicted RBP15.08■□□□□ 0
TCF4-289ENST00000637941 SPATA32Q96LK8 384 aa15.08■□□□□ 0
TCF4-289ENST00000637941 HAUS7Q99871 368 aa15.08■□□□□ 0
TCF4-289ENST00000637941 DBNLQ9UJU6 430 aaKnown RBP15.08■□□□□ 0
TCF4-289ENST00000637941 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.08■□□□□ 0
TCF4-289ENST00000637941 TPRNQ4KMQ1 711 aa15.07■□□□□ 0
TCF4-289ENST00000637941 ZNF589Q86UQ0 364 aaPredicted RBP15.07■□□□□ 0
TCF4-289ENST00000637941 PLBD2Q8NHP8 589 aa15.07■□□□□ 0
TCF4-289ENST00000637941 DDX54Q8TDD1 881 aaKnown RBP15.07■□□□□ 0
TCF4-289ENST00000637941 GTF3C6Q969F1 213 aa15.07■□□□□ 0
TCF4-289ENST00000637941 ZSCAN16Q9H4T2 348 aaPredicted RBP15.07■□□□□ 0
TCF4-289ENST00000637941 MEGF6O75095 1541 aa15.07■□□□□ 0
TCF4-289ENST00000637941 SH3TC1Q8TE82 1336 aa15.07■□□□□ 0
TCF4-289ENST00000637941 CSB-PGBD3P0DP91 1061 aa15.07■□□□□ 0
TCF4-289ENST00000637941 TFCP2Q12800 502 aa15.07■□□□□ 0
TCF4-289ENST00000637941 NOLC1Q14978 699 aaKnown RBP eCLIP15.07■□□□□ 0
TCF4-289ENST00000637941 EPHA10Q5JZY3 1008 aa15.07■□□□□ 0
TCF4-289ENST00000637941 KLHDC4Q8TBB5 520 aa15.07■□□□□ 0
TCF4-289ENST00000637941 CABLES1Q8TDN4 633 aa15.07■□□□□ 0
TCF4-289ENST00000637941 LLPHQ9BRT6 129 aaKnown RBP15.07■□□□□ 0
TCF4-289ENST00000637941 SPEF2Q9C093 1822 aa15.06■□□□□ 0
TCF4-289ENST00000637941 PALLDQ8WX93 1383 aa15.06■□□□□ 0
TCF4-289ENST00000637941 CAVIN2O95810 425 aa15.06■□□□□ 0
TCF4-289ENST00000637941 UBE3BQ7Z3V4 1068 aa15.06■□□□□ 0
TCF4-289ENST00000637941 LRP10Q7Z4F1 713 aa15.06■□□□□ 0
TCF4-289ENST00000637941 TNMDQ9H2S6 317 aa15.06■□□□□ 0
TCF4-289ENST00000637941 A0A087WZG4 1122 aa15.05■□□□□ 0
TCF4-289ENST00000637941 HSP90B1P14625 803 aaKnown RBP15.05■□□□□ 0
TCF4-289ENST00000637941 GPR108Q9NPR9 543 aa15.05■□□□□ 0
TCF4-289ENST00000637941 CFAP45Q9UL16 551 aa15.05■□□□□ 0
TCF4-289ENST00000637941 CABP4P57796 275 aa15.05■□□□□ -0
TCF4-289ENST00000637941 PLCB2Q00722 1185 aa15.05■□□□□ -0
TCF4-289ENST00000637941 FERMT3Q86UX7 667 aa15.05■□□□□ -0
TCF4-289ENST00000637941 HELLSQ9NRZ9 838 aa15.05■□□□□ -0
TCF4-289ENST00000637941 SPTLC3Q9NUV7 552 aa15.05■□□□□ -0
TCF4-289ENST00000637941 SLAIN2Q9P270 581 aa15.05■□□□□ -0
TCF4-289ENST00000637941 MYH15Q9Y2K3 1946 aa15.05■□□□□ -0
TCF4-289ENST00000637941 ZNF609O15014 1411 aa15.04■□□□□ -0
TCF4-289ENST00000637941 H3BQV1 296 aa15.04■□□□□ -0
TCF4-289ENST00000637941 TYRO3Q06418 890 aa15.04■□□□□ -0
TCF4-289ENST00000637941 IFFO2Q5TF58 517 aa15.04■□□□□ -0
TCF4-289ENST00000637941 KBTBD3Q8NAB2 608 aa15.04■□□□□ -0
TCF4-289ENST00000637941 LEO1Q8WVC0 666 aaPredicted RBP15.04■□□□□ -0
TCF4-289ENST00000637941 DNAJC2Q99543 621 aaKnown RBP15.04■□□□□ -0
TCF4-289ENST00000637941 USP16Q9Y5T5 823 aa15.04■□□□□ -0
TCF4-289ENST00000637941 FGD1P98174 961 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms