RNA–Protein interactions for RNA: ENST00000637923.2

TCF4-288, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-288ENST00000637923 SPDYE3A6NKU9 549 aa6.19□□□□□ -1.42
TCF4-288ENST00000637923 IRS4O14654 1257 aaPredicted RBP6.19□□□□□ -1.42
TCF4-288ENST00000637923 STX6O43752 255 aa6.19□□□□□ -1.42
TCF4-288ENST00000637923 HCLS1P14317 486 aaPredicted RBP6.19□□□□□ -1.42
TCF4-288ENST00000637923 PRIM1P49642 420 aaKnown RBP6.19□□□□□ -1.42
TCF4-288ENST00000637923 IRX3P78415 501 aaPredicted RBP6.19□□□□□ -1.42
TCF4-288ENST00000637923 CEP83Q9Y592 693 aa6.19□□□□□ -1.42
TCF4-288ENST00000637923 ADGRF5Q8IZF2 1346 aa6.19□□□□□ -1.42
TCF4-288ENST00000637923 NAPAP54920 295 aa6.19□□□□□ -1.42
TCF4-288ENST00000637923 LRRC2Q9BYS8 371 aa6.19□□□□□ -1.42
TCF4-288ENST00000637923 KRT85P78386 507 aa6.19□□□□□ -1.42
TCF4-288ENST00000637923 SMC1AQ14683 1233 aaKnown RBP6.19□□□□□ -1.42
TCF4-288ENST00000637923 BRDTQ58F21 947 aaPredicted RBP6.19□□□□□ -1.42
TCF4-288ENST00000637923 TCP11L1Q9NUJ3 509 aa6.19□□□□□ -1.42
TCF4-288ENST00000637923 TMCO5BA8MYB1 307 aa6.19□□□□□ -1.42
TCF4-288ENST00000637923 MTIF2P46199 727 aaKnown RBP6.19□□□□□ -1.42
TCF4-288ENST00000637923 CFAP100Q494V2 611 aa6.19□□□□□ -1.42
TCF4-288ENST00000637923 CCDC12Q8WUD4 166 aaPredicted RBP6.19□□□□□ -1.42
TCF4-288ENST00000637923 SPA17Q15506 151 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 FCHSD1Q86WN1 690 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 MX1P20591 662 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 CETN1Q12798 172 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 KRT32Q14532 448 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 USH1GQ495M9 461 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 PLIN2Q99541 437 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 CSADQ9Y600 493 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 IFRD2Q12894 506 aaPredicted RBP6.18□□□□□ -1.42
TCF4-288ENST00000637923 Q3C1V9 767 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 ZBTB33Q86T24 672 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 HECW1Q76N89 1606 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 TCP10L2B9ZVM9 353 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 M0QZ92 97 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 GABPAQ06546 454 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 DOK7Q18PE1 504 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 DYDC1Q8WWB3 177 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 UPF3BQ9BZI7 483 aaKnown RBP6.18□□□□□ -1.42
TCF4-288ENST00000637923 TTC21AQ8NDW8 1320 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 METAP2P50579 478 aaKnown RBP eCLIP6.18□□□□□ -1.42
TCF4-288ENST00000637923 ERCC4Q92889 916 aaPredicted RBP6.18□□□□□ -1.42
TCF4-288ENST00000637923 NUP88Q99567 741 aaPredicted RBP6.18□□□□□ -1.42
TCF4-288ENST00000637923 ZKSCAN3Q9BRR0 538 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 GOLGA6L10A0A0M3HER8 536 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 HAUS7Q99871 368 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 NBPF3Q9H094 633 aa6.18□□□□□ -1.42
TCF4-288ENST00000637923 LRRC9Q6ZRR7 1453 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 BIN1O00499 593 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 FILIP1Q7Z7B0 1213 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 GGA1Q9UJY5 639 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 CFAP45Q9UL16 551 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 RBM25P49756 843 aaKnown RBP6.17□□□□□ -1.42
TCF4-288ENST00000637923 ARID5AQ03989 594 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 WTAPQ15007 396 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 CCDC91Q7Z6B0 441 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 C19orf44Q9H6X5 657 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 FANCAO15360 1455 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 STXBP4Q6ZWJ1 553 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 TXLNBQ8N3L3 684 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 NOS1P29475 1434 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 NASPP49321 788 aaPredicted RBP6.17□□□□□ -1.42
TCF4-288ENST00000637923 FLIIQ13045 1269 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 C2CD5Q86YS7 1000 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 USP16Q9Y5T5 823 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 PLB1Q6P1J6 1458 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 RAB11FIP3O75154 756 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 GLRX3O76003 335 aaKnown RBP6.17□□□□□ -1.42
TCF4-288ENST00000637923 LETM1O95202 739 aaPredicted RBP6.17□□□□□ -1.42
TCF4-288ENST00000637923 KCNQ4P56696 695 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 SULF1Q8IWU6 871 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 CNNM3Q8NE01 707 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 TSNARE1Q96NA8 513 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 FERMT1Q9BQL6 677 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 TOPBP1Q92547 1522 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 PSDA5PKW4 1024 aaPredicted RBP6.17□□□□□ -1.42
TCF4-288ENST00000637923 EEF2P13639 858 aaKnown RBP6.17□□□□□ -1.42
TCF4-288ENST00000637923 PDE3AQ14432 1141 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 VPS36Q86VN1 386 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 METTL13Q8N6R0 699 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 SPC25Q9HBM1 224 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 C6orf50Q9HD87 102 aa6.17□□□□□ -1.42
TCF4-288ENST00000637923 SYNJ1O43426 1573 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 CCDC192P0DO97 292 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 AFMP43652 599 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 HSP90AA4PQ58FG1 418 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 SLC9C2Q5TAH2 1124 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 KIFC2Q96AC6 838 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 CBFA2T2O43439 604 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 LMBR1LQ6UX01 489 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 TEX11Q8IYF3 940 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 KIF14Q15058 1648 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 FAM13AO94988 1023 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 RXRAP19793 462 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 RASA3Q14644 834 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 TTC30BQ8N4P2 665 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 ALS2CR12Q96Q35 445 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 TAF5LO75529 589 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 UBA7P41226 1012 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 IARSP41252 1262 aaKnown RBP6.16□□□□□ -1.42
TCF4-288ENST00000637923 APBB1IPQ7Z5R6 666 aaPredicted RBP6.16□□□□□ -1.42
TCF4-288ENST00000637923 ERMNQ8TAM6 284 aa6.16□□□□□ -1.42
TCF4-288ENST00000637923 CCDC169A6NNP5 214 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms