RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 ECM1Q16610 540 aa16.62■□□□□ 0.25
CACNA1A-244ENST00000637625 GIPC2Q8TF65 315 aa16.62■□□□□ 0.25
CACNA1A-244ENST00000637625 PCDHGA11Q9Y5H2 935 aa16.62■□□□□ 0.25
CACNA1A-244ENST00000637625 COL3A1P02461 1466 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-244ENST00000637625 MAGEB6P1A0A0J9YX57 407 aa16.61■□□□□ 0.25
CACNA1A-244ENST00000637625 CCDC102BQ68D86 513 aa16.61■□□□□ 0.25
CACNA1A-244ENST00000637625 CAPN12Q6ZSI9 719 aa16.61■□□□□ 0.25
CACNA1A-244ENST00000637625 PPM1GO15355 546 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-244ENST00000637625 C4orf48Q5BLP8 95 aa16.61■□□□□ 0.25
CACNA1A-244ENST00000637625 SEC13P55735 322 aa16.6■□□□□ 0.25
CACNA1A-244ENST00000637625 TAGLNQ01995 201 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-244ENST00000637625 DZIP3Q86Y13 1208 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-244ENST00000637625 TPCN2Q8NHX9 752 aa16.6■□□□□ 0.25
CACNA1A-244ENST00000637625 ADGRL3Q9HAR2 1447 aa16.6■□□□□ 0.25
CACNA1A-244ENST00000637625 TTC21BQ7Z4L5 1316 aa16.59■□□□□ 0.25
CACNA1A-244ENST00000637625 ABL1P00519 1130 aa16.59■□□□□ 0.25
CACNA1A-244ENST00000637625 NGDNQ8NEJ9 315 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-244ENST00000637625 COG3Q96JB2 828 aa16.59■□□□□ 0.25
CACNA1A-244ENST00000637625 ANKARQ7Z5J8 1434 aa16.59■□□□□ 0.25
CACNA1A-244ENST00000637625 APAF1O14727 1248 aa16.59■□□□□ 0.25
CACNA1A-244ENST00000637625 STRCP1A6NGW2 1772 aa16.58■□□□□ 0.25
CACNA1A-244ENST00000637625 H3BRB1 525 aa16.58■□□□□ 0.24
CACNA1A-244ENST00000637625 ERFEQ4G0M1 354 aa16.58■□□□□ 0.24
CACNA1A-244ENST00000637625 TUT1Q9H6E5 874 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-244ENST00000637625 U2SURPO15042 1029 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-244ENST00000637625 WNT2BQ93097 391 aa16.57■□□□□ 0.24
CACNA1A-244ENST00000637625 SEPT3Q9UH03 358 aa16.57■□□□□ 0.24
CACNA1A-244ENST00000637625 EMILIN1Q9Y6C2 1016 aa16.57■□□□□ 0.24
CACNA1A-244ENST00000637625 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-244ENST00000637625 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
CACNA1A-244ENST00000637625 PURBQ96QR8 312 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-244ENST00000637625 LMTK3Q96Q04 1460 aa16.56■□□□□ 0.24
CACNA1A-244ENST00000637625 PIK3C2AO00443 1686 aa16.56■□□□□ 0.24
CACNA1A-244ENST00000637625 RRS1Q15050 365 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-244ENST00000637625 GOLGA8CPA6NN73 597 aa16.55■□□□□ 0.24
CACNA1A-244ENST00000637625 CCDC24Q8N4L8 307 aa16.55■□□□□ 0.24
CACNA1A-244ENST00000637625 GAS2L2Q8NHY3 880 aa16.55■□□□□ 0.24
CACNA1A-244ENST00000637625 FOXJ1Q92949 421 aa16.55■□□□□ 0.24
CACNA1A-244ENST00000637625 POLKQ9UBT6 870 aa16.55■□□□□ 0.24
CACNA1A-244ENST00000637625 OVOS2A0A0J9YW53 1432 aa16.55■□□□□ 0.24
CACNA1A-244ENST00000637625 OVOS2Q6IE36 1432 aa16.55■□□□□ 0.24
CACNA1A-244ENST00000637625 IQSEC2Q5JU85 1478 aa16.55■□□□□ 0.24
CACNA1A-244ENST00000637625 MTMR3Q13615 1198 aa16.54■□□□□ 0.24
CACNA1A-244ENST00000637625 EGFL7Q9UHF1 273 aa16.54■□□□□ 0.24
CACNA1A-244ENST00000637625 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-244ENST00000637625 ICMTO60725 284 aa16.54■□□□□ 0.24
CACNA1A-244ENST00000637625 SSH2Q76I76 1423 aa16.54■□□□□ 0.24
CACNA1A-244ENST00000637625 USP35Q9P2H5 1018 aa16.53■□□□□ 0.24
CACNA1A-244ENST00000637625 STRCQ7RTU9 1775 aa16.52■□□□□ 0.24
CACNA1A-244ENST00000637625 DIAPH1O60610 1272 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-244ENST00000637625 PDE3BQ13370 1112 aa16.52■□□□□ 0.24
CACNA1A-244ENST00000637625 BAP1Q92560 729 aa16.52■□□□□ 0.23
CACNA1A-244ENST00000637625 RUNDC1Q96C34 613 aa16.52■□□□□ 0.23
CACNA1A-244ENST00000637625 MKNK1Q9BUB5 465 aa16.52■□□□□ 0.23
CACNA1A-244ENST00000637625 DNMT3AQ9Y6K1 912 aaPredicted RBP16.52■□□□□ 0.23
CACNA1A-244ENST00000637625 CDK12Q9NYV4 1490 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-244ENST00000637625 PNPLA6Q8IY17 1366 aa16.51■□□□□ 0.23
CACNA1A-244ENST00000637625 LINC01559Q495D7 138 aa16.5■□□□□ 0.23
CACNA1A-244ENST00000637625 ESCO1Q5FWF5 840 aa16.5■□□□□ 0.23
CACNA1A-244ENST00000637625 NUTM2GQ5VZR2 741 aa16.5■□□□□ 0.23
CACNA1A-244ENST00000637625 FBXO33Q7Z6M2 555 aa16.5■□□□□ 0.23
CACNA1A-244ENST00000637625 TSEN2Q8NCE0 465 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-244ENST00000637625 GTF3C2Q8WUA4 911 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-244ENST00000637625 ZNF521Q96K83 1311 aa16.5■□□□□ 0.23
CACNA1A-244ENST00000637625 AATKQ6ZMQ8 1374 aa16.5■□□□□ 0.23
CACNA1A-244ENST00000637625 PEAK1Q9H792 1746 aa16.5■□□□□ 0.23
CACNA1A-244ENST00000637625 MARF1Q9Y4F3 1742 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-244ENST00000637625 LRRC7Q96NW7 1537 aa16.5■□□□□ 0.23
CACNA1A-244ENST00000637625 TCP11L2Q8N4U5 519 aa16.5■□□□□ 0.23
CACNA1A-244ENST00000637625 TTC21AQ8NDW8 1320 aa16.5■□□□□ 0.23
CACNA1A-244ENST00000637625 ADH1BP00325 375 aa16.49■□□□□ 0.23
CACNA1A-244ENST00000637625 ARHGAP4P98171 946 aa16.49■□□□□ 0.23
CACNA1A-244ENST00000637625 ZPR1O75312 459 aa16.48■□□□□ 0.23
CACNA1A-244ENST00000637625 PSME1Q06323 249 aa16.48■□□□□ 0.23
CACNA1A-244ENST00000637625 FKBP5Q13451 457 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-244ENST00000637625 WEE1P30291 646 aa16.48■□□□□ 0.23
CACNA1A-244ENST00000637625 TMEM94Q12767 1356 aa16.48■□□□□ 0.23
CACNA1A-244ENST00000637625 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
CACNA1A-244ENST00000637625 GLYCTKQ8IVS8 523 aa16.47■□□□□ 0.23
CACNA1A-244ENST00000637625 ORAI2Q96SN7 254 aa16.47■□□□□ 0.23
CACNA1A-244ENST00000637625 ESPNB1AK53 854 aa16.46■□□□□ 0.23
CACNA1A-244ENST00000637625 C21orf2O43822 256 aa16.46■□□□□ 0.22
CACNA1A-244ENST00000637625 HMOX1P09601 288 aa16.46■□□□□ 0.22
CACNA1A-244ENST00000637625 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.22
CACNA1A-244ENST00000637625 ZNF511Q8NB15 262 aa16.46■□□□□ 0.22
CACNA1A-244ENST00000637625 HINFPQ9BQA5 517 aa16.46■□□□□ 0.22
CACNA1A-244ENST00000637625 RCAN3Q9UKA8 241 aa16.46■□□□□ 0.22
CACNA1A-244ENST00000637625 USP31Q70CQ4 1352 aa16.45■□□□□ 0.22
CACNA1A-244ENST00000637625 MAPK8IP3Q9UPT6 1336 aa16.45■□□□□ 0.22
CACNA1A-244ENST00000637625 PCDHB11Q9Y5F2 797 aa16.45■□□□□ 0.22
CACNA1A-244ENST00000637625 DUSP27Q5VZP5 1158 aa16.44■□□□□ 0.22
CACNA1A-244ENST00000637625 XIRP1Q702N8 1843 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-244ENST00000637625 BPHLQ86WA6 291 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-244ENST00000637625 ABTB2Q8N961 1025 aa16.44■□□□□ 0.22
CACNA1A-244ENST00000637625 PLEKHF1Q96S99 279 aa16.44■□□□□ 0.22
CACNA1A-244ENST00000637625 USP54Q70EL1 1684 aa16.43■□□□□ 0.22
CACNA1A-244ENST00000637625 TCF3P15923 654 aa16.43■□□□□ 0.22
CACNA1A-244ENST00000637625 MAPK1P28482 360 aa16.43■□□□□ 0.22
CACNA1A-244ENST00000637625 IL13P35225 146 aa16.43■□□□□ 0.22
CACNA1A-244ENST00000637625 SLFN5Q08AF3 891 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms