RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 TEFQ10587 303 aa23.83■■□□□ 1.41
CACNA1A-243ENST00000637616 G3BP1Q13283 466 aaKnown RBP eCLIP23.83■■□□□ 1.41
CACNA1A-243ENST00000637616 BICC1Q9H694 974 aaKnown RBP23.83■■□□□ 1.41
CACNA1A-243ENST00000637616 H3BQV1 296 aa23.82■■□□□ 1.4
CACNA1A-243ENST00000637616 IFFO2Q5TF58 517 aa23.82■■□□□ 1.4
CACNA1A-243ENST00000637616 NBPF6Q5VWK0 638 aa23.82■■□□□ 1.4
CACNA1A-243ENST00000637616 NBPF4Q96M43 638 aa23.82■■□□□ 1.4
CACNA1A-243ENST00000637616 PTPRUQ92729 1446 aa23.82■■□□□ 1.4
CACNA1A-243ENST00000637616 KIF20AO95235 890 aa23.82■■□□□ 1.4
CACNA1A-243ENST00000637616 RNF20Q5VTR2 975 aa23.82■■□□□ 1.4
CACNA1A-243ENST00000637616 KAZALD1Q96I82 304 aa23.82■■□□□ 1.4
CACNA1A-243ENST00000637616 GOLGA6L19H0YKK7 550 aa23.82■■□□□ 1.4
CACNA1A-243ENST00000637616 CCDC129Q6ZRS4 1044 aa23.82■■□□□ 1.4
CACNA1A-243ENST00000637616 RBM43Q6ZSC3 357 aaKnown RBP23.82■■□□□ 1.4
CACNA1A-243ENST00000637616 LRRC8AQ8IWT6 810 aa23.82■■□□□ 1.4
CACNA1A-243ENST00000637616 FEZ1Q99689 392 aa23.82■■□□□ 1.4
CACNA1A-243ENST00000637616 CCDC9Q9Y3X0 531 aaKnown RBP23.82■■□□□ 1.4
CACNA1A-243ENST00000637616 MTX1Q13505 466 aa23.81■■□□□ 1.4
CACNA1A-243ENST00000637616 SYTL4Q96C24 671 aaPredicted RBP23.81■■□□□ 1.4
CACNA1A-243ENST00000637616 BABAM1Q9NWV8 329 aa23.81■■□□□ 1.4
CACNA1A-243ENST00000637616 NPHP4O75161 1426 aaPredicted RBP23.81■■□□□ 1.4
CACNA1A-243ENST00000637616 LRRC37A3O60309 1634 aa23.8■■□□□ 1.4
CACNA1A-243ENST00000637616 ANKRD1Q15327 319 aa23.8■■□□□ 1.4
CACNA1A-243ENST00000637616 ERC1Q8IUD2 1116 aa23.8■■□□□ 1.4
CACNA1A-243ENST00000637616 ZNF215Q9UL58 517 aaPredicted RBP23.8■■□□□ 1.4
CACNA1A-243ENST00000637616 LRRC59Q96AG4 307 aaKnown RBP23.8■■□□□ 1.4
CACNA1A-243ENST00000637616 SEC62Q99442 399 aaKnown RBP23.8■■□□□ 1.4
CACNA1A-243ENST00000637616 RESTQ13127 1097 aa23.79■■□□□ 1.4
CACNA1A-243ENST00000637616 IQCB1Q15051 598 aa23.79■■□□□ 1.4
CACNA1A-243ENST00000637616 PAXBP1Q9Y5B6 917 aa23.79■■□□□ 1.4
CACNA1A-243ENST00000637616 TNRQ92752 1358 aa23.79■■□□□ 1.4
CACNA1A-243ENST00000637616 SKILP12757 684 aa23.79■■□□□ 1.4
CACNA1A-243ENST00000637616 Q6ZUG5 572 aa23.79■■□□□ 1.4
CACNA1A-243ENST00000637616 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.79■■□□□ 1.4
CACNA1A-243ENST00000637616 DBF4Q9UBU7 674 aaPredicted RBP23.78■■□□□ 1.4
CACNA1A-243ENST00000637616 NWD1Q149M9 1564 aa23.78■■□□□ 1.4
CACNA1A-243ENST00000637616 SETD1BQ9UPS6 1966 aaKnown RBP23.78■■□□□ 1.4
CACNA1A-243ENST00000637616 TOPAZ1Q8N9V7 1692 aa23.78■■□□□ 1.4
CACNA1A-243ENST00000637616 CACNA1FO60840 1977 aa23.78■■□□□ 1.4
CACNA1A-243ENST00000637616 CEBPAP49715 358 aaPredicted RBP23.78■■□□□ 1.4
CACNA1A-243ENST00000637616 GOLPH3LQ9H4A5 285 aa23.78■■□□□ 1.4
CACNA1A-243ENST00000637616 TAF5LO75529 589 aa23.77■■□□□ 1.4
CACNA1A-243ENST00000637616 KLHL34Q8N239 644 aa23.77■■□□□ 1.4
CACNA1A-243ENST00000637616 DDX41Q9UJV9 622 aaKnown RBP23.77■■□□□ 1.4
CACNA1A-243ENST00000637616 ZNF530Q6P9A1 599 aaPredicted RBP23.77■■□□□ 1.4
CACNA1A-243ENST00000637616 KSR2Q6VAB6 950 aa23.77■■□□□ 1.4
CACNA1A-243ENST00000637616 CCAR1Q8IX12 1150 aaKnown RBP23.77■■□□□ 1.4
CACNA1A-243ENST00000637616 GTF3C6Q969F1 213 aa23.77■■□□□ 1.4
CACNA1A-243ENST00000637616 GUCY1B3Q02153 619 aa23.76■■□□□ 1.39
CACNA1A-243ENST00000637616 CGNQ9P2M7 1197 aaKnown RBP23.76■■□□□ 1.39
CACNA1A-243ENST00000637616 CEMIPQ8WUJ3 1361 aa23.76■■□□□ 1.39
CACNA1A-243ENST00000637616 BECN2A8MW95 431 aa23.76■■□□□ 1.39
CACNA1A-243ENST00000637616 HIP1O00291 1037 aa23.76■■□□□ 1.39
CACNA1A-243ENST00000637616 FGD1P98174 961 aa23.76■■□□□ 1.39
CACNA1A-243ENST00000637616 PTPN14Q15678 1187 aa23.76■■□□□ 1.39
CACNA1A-243ENST00000637616 KMT5BQ4FZB7 885 aa23.76■■□□□ 1.39
CACNA1A-243ENST00000637616 CCDC69A6NI79 296 aa23.75■■□□□ 1.39
CACNA1A-243ENST00000637616 GRM8O00222 908 aa23.75■■□□□ 1.39
CACNA1A-243ENST00000637616 KIF18AQ8NI77 898 aa23.75■■□□□ 1.39
CACNA1A-243ENST00000637616 NAP1L2Q9ULW6 460 aaPredicted RBP23.75■■□□□ 1.39
CACNA1A-243ENST00000637616 CRYBG1Q9Y4K1 1723 aa23.75■■□□□ 1.39
CACNA1A-243ENST00000637616 COL15A1P39059 1388 aa23.75■■□□□ 1.39
CACNA1A-243ENST00000637616 SLFNL1Q499Z3 407 aa23.75■■□□□ 1.39
CACNA1A-243ENST00000637616 NEK1Q96PY6 1258 aa23.75■■□□□ 1.39
CACNA1A-243ENST00000637616 SCRN1Q12765 414 aa23.74■■□□□ 1.39
CACNA1A-243ENST00000637616 CCT2P78371 535 aaKnown RBP23.73■■□□□ 1.39
CACNA1A-243ENST00000637616 ELF2Q15723 593 aa23.73■■□□□ 1.39
CACNA1A-243ENST00000637616 DNAJC2Q99543 621 aaKnown RBP23.73■■□□□ 1.39
CACNA1A-243ENST00000637616 RBM33Q96EV2 1170 aaKnown RBP23.73■■□□□ 1.39
CACNA1A-243ENST00000637616 RGPD8O14715 1765 aaPredicted RBP23.73■■□□□ 1.39
CACNA1A-243ENST00000637616 MED23Q9ULK4 1368 aa23.73■■□□□ 1.39
CACNA1A-243ENST00000637616 ALDH1L1O75891 902 aa23.73■■□□□ 1.39
CACNA1A-243ENST00000637616 ST7Q9NRC1 585 aa23.73■■□□□ 1.39
CACNA1A-243ENST00000637616 PIK3C2AO00443 1686 aa23.72■■□□□ 1.39
CACNA1A-243ENST00000637616 AGLP35573 1532 aa23.72■■□□□ 1.39
CACNA1A-243ENST00000637616 SYCP1Q15431 976 aa23.72■■□□□ 1.39
CACNA1A-243ENST00000637616 EPHA10Q5JZY3 1008 aa23.72■■□□□ 1.39
CACNA1A-243ENST00000637616 N4BP2Q86UW6 1770 aaPredicted RBP23.71■■□□□ 1.39
CACNA1A-243ENST00000637616 GIGYF1O75420 1035 aaPredicted RBP23.71■■□□□ 1.39
CACNA1A-243ENST00000637616 ADD1P35611 737 aaKnown RBP23.71■■□□□ 1.39
CACNA1A-243ENST00000637616 USP28Q96RU2 1077 aa23.71■■□□□ 1.39
CACNA1A-243ENST00000637616 CFAP45Q9UL16 551 aa23.71■■□□□ 1.39
CACNA1A-243ENST00000637616 CYP21A2P08686 494 aa23.71■■□□□ 1.39
CACNA1A-243ENST00000637616 DHX40Q8IX18 779 aaKnown RBP23.71■■□□□ 1.39
CACNA1A-243ENST00000637616 AOPEPQ8N6M6 819 aa23.71■■□□□ 1.39
CACNA1A-243ENST00000637616 NCOA5Q9HCD5 579 aaKnown RBP23.71■■□□□ 1.39
CACNA1A-243ENST00000637616 HOXB7P09629 217 aa23.7■■□□□ 1.39
CACNA1A-243ENST00000637616 SLFN14P0C7P3 912 aa23.7■■□□□ 1.39
CACNA1A-243ENST00000637616 CCZ1BP86790 482 aa23.7■■□□□ 1.39
CACNA1A-243ENST00000637616 CCZ1P86791 482 aaPredicted RBP23.7■■□□□ 1.39
CACNA1A-243ENST00000637616 FBXO38Q6PIJ6 1188 aa23.7■■□□□ 1.39
CACNA1A-243ENST00000637616 PDIA4P13667 645 aaKnown RBP23.7■■□□□ 1.38
CACNA1A-243ENST00000637616 STX1AQ16623 288 aa23.7■■□□□ 1.38
CACNA1A-243ENST00000637616 MYL6BP14649 208 aa23.7■■□□□ 1.38
CACNA1A-243ENST00000637616 SNW1Q13573 536 aaKnown RBP23.7■■□□□ 1.38
CACNA1A-243ENST00000637616 SNRKQ9NRH2 765 aa23.7■■□□□ 1.38
CACNA1A-243ENST00000637616 MORC2Q9Y6X9 1032 aaPredicted RBP23.7■■□□□ 1.38
CACNA1A-243ENST00000637616 NYAP1Q6ZVC0 841 aa23.69■■□□□ 1.38
CACNA1A-243ENST00000637616 CHST3Q7LGC8 479 aa23.69■■□□□ 1.38
CACNA1A-243ENST00000637616 A0A0G2JLW4 131 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms