RNA–Protein interactions for RNA: ENST00000637368.1

NRXN1-256, Transcript of neurexin 1, human

TSL 5

Gene NRXN1, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-256	ENST00000637368	TRIM42	Q8IWZ5	723 aa		6.56	□□□□□ -1.36
NRXN1-256	ENST00000637368	UTP4	Q969X6	686 aa	Known RBP	6.56	□□□□□ -1.36
NRXN1-256	ENST00000637368	ANGEL1	Q9UNK9	670 aa	Known RBP	6.56	□□□□□ -1.36
NRXN1-256	ENST00000637368	TBCEL	Q5QJ74	424 aa		6.55	□□□□□ -1.36
NRXN1-256	ENST00000637368	DHX32	Q7L7V1	743 aa	Known RBP	6.55	□□□□□ -1.36
NRXN1-256	ENST00000637368	SMG9	Q9H0W8	520 aa	Known RBP	6.55	□□□□□ -1.36
NRXN1-256	ENST00000637368	ZBTB42	B2RXF5	422 aa		6.54	□□□□□ -1.36
NRXN1-256	ENST00000637368	SETDB1	Q15047	1291 aa		6.54	□□□□□ -1.36
NRXN1-256	ENST00000637368	TNS4	Q8IZW8	715 aa		6.54	□□□□□ -1.36
NRXN1-256	ENST00000637368	SHKBP1	Q8TBC3	707 aa		6.54	□□□□□ -1.36
NRXN1-256	ENST00000637368	FBXL18	Q96ME1	805 aa		6.54	□□□□□ -1.36
NRXN1-256	ENST00000637368	HMX2	A2RU54	273 aa		6.53	□□□□□ -1.36
NRXN1-256	ENST00000637368	LZTS3	O60299	673 aa	Predicted RBP	6.53	□□□□□ -1.36
NRXN1-256	ENST00000637368	PRNP	P04156	253 aa		6.53	□□□□□ -1.36
NRXN1-256	ENST00000637368	GTF2I	P78347	998 aa		6.53	□□□□□ -1.36
NRXN1-256	ENST00000637368	EML3	Q32P44	896 aa		6.53	□□□□□ -1.36
NRXN1-256	ENST00000637368	KRTAP19-4	Q3LI73	84 aa		6.53	□□□□□ -1.36
NRXN1-256	ENST00000637368	FAM46A	Q96IP4	442 aa	Known RBP	6.53	□□□□□ -1.36
NRXN1-256	ENST00000637368	MYRFL	Q96LU7	910 aa		6.53	□□□□□ -1.36
NRXN1-256	ENST00000637368	C11orf16	Q9NQ32	467 aa		6.53	□□□□□ -1.36
NRXN1-256	ENST00000637368	NOD1	Q9Y239	953 aa		6.53	□□□□□ -1.36
NRXN1-256	ENST00000637368	HCN4	Q9Y3Q4	1203 aa		6.53	□□□□□ -1.36
NRXN1-256	ENST00000637368	EPB42	P16452	691 aa		6.52	□□□□□ -1.37
NRXN1-256	ENST00000637368	ARID4A	P29374	1257 aa	Predicted RBP	6.52	□□□□□ -1.37
NRXN1-256	ENST00000637368	PSME1	Q06323	249 aa		6.52	□□□□□ -1.37
NRXN1-256	ENST00000637368	CLEC10A	Q8IUN9	316 aa		6.52	□□□□□ -1.37
NRXN1-256	ENST00000637368	NRL	P54845	237 aa		6.51	□□□□□ -1.37
NRXN1-256	ENST00000637368	MSMP	Q1L6U9	139 aa		6.51	□□□□□ -1.37
NRXN1-256	ENST00000637368	FAM83C	Q9BQN1	747 aa		6.51	□□□□□ -1.37
NRXN1-256	ENST00000637368	PIM2	Q9P1W9	311 aa		6.51	□□□□□ -1.37
NRXN1-256	ENST00000637368	SLC24A1	O60721	1099 aa		6.5	□□□□□ -1.37
NRXN1-256	ENST00000637368	IRF5	Q13568	498 aa		6.5	□□□□□ -1.37
NRXN1-256	ENST00000637368	CPSF6	Q16630	551 aa	Known RBP eCLIP	6.5	□□□□□ -1.37
NRXN1-256	ENST00000637368	VSIG10L	Q86VR7	867 aa		6.5	□□□□□ -1.37
NRXN1-256	ENST00000637368	CACTIN-AS1	Q8N1I8	211 aa		6.5	□□□□□ -1.37
NRXN1-256	ENST00000637368	MUC3B	Q9H195	1237 aa		6.5	□□□□□ -1.37
NRXN1-256	ENST00000637368	ZFAT	Q9P243	1243 aa		6.5	□□□□□ -1.37
NRXN1-256	ENST00000637368	CCDC39	Q9UFE4	941 aa		6.5	□□□□□ -1.37
NRXN1-256	ENST00000637368	TBC1D2B	Q9UPU7	963 aa		6.5	□□□□□ -1.37
NRXN1-256	ENST00000637368	TGFBR3L	H3BV60	316 aa		6.49	□□□□□ -1.37
NRXN1-256	ENST00000637368	EIF2AK2	P19525	551 aa	Known RBP	6.49	□□□□□ -1.37
NRXN1-256	ENST00000637368	HOXA10	P31260	410 aa	Predicted RBP	6.49	□□□□□ -1.37
NRXN1-256	ENST00000637368	ZNF648	Q5T619	568 aa	Predicted RBP	6.49	□□□□□ -1.37
NRXN1-256	ENST00000637368	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	6.49	□□□□□ -1.37
NRXN1-256	ENST00000637368	PRM3	Q9NNZ6	103 aa		6.49	□□□□□ -1.37
NRXN1-256	ENST00000637368	SNRK	Q9NRH2	765 aa		6.49	□□□□□ -1.37
NRXN1-256	ENST00000637368	SOX11	P35716	441 aa		6.48	□□□□□ -1.37
NRXN1-256	ENST00000637368	MLLT1	Q03111	559 aa	Predicted RBP	6.48	□□□□□ -1.37
NRXN1-256	ENST00000637368	NFXL1	Q6ZNB6	911 aa		6.48	□□□□□ -1.37
NRXN1-256	ENST00000637368	FAM20C	Q8IXL6	584 aa		6.48	□□□□□ -1.37
NRXN1-256	ENST00000637368	ALDH16A1	Q8IZ83	802 aa		6.48	□□□□□ -1.37
NRXN1-256	ENST00000637368	IL22RA1	Q8N6P7	574 aa		6.48	□□□□□ -1.37
NRXN1-256	ENST00000637368	PLD4	Q96BZ4	506 aa		6.48	□□□□□ -1.37
NRXN1-256	ENST00000637368	STAG2	Q8N3U4	1231 aa		6.47	□□□□□ -1.37
NRXN1-256	ENST00000637368	DMGDH	Q9UI17	866 aa	Known RBP	6.47	□□□□□ -1.37
NRXN1-256	ENST00000637368	NCAN	O14594	1321 aa		6.47	□□□□□ -1.37
NRXN1-256	ENST00000637368	WDR64	B1ANS9	1081 aa		6.46	□□□□□ -1.38
NRXN1-256	ENST00000637368		M0R2N6	131 aa		6.46	□□□□□ -1.38
NRXN1-256	ENST00000637368	RARA	P10276	462 aa		6.46	□□□□□ -1.38
NRXN1-256	ENST00000637368	GRN	P28799	593 aa	Known RBP	6.46	□□□□□ -1.38
NRXN1-256	ENST00000637368	ZNF124	Q15973	351 aa		6.46	□□□□□ -1.38
NRXN1-256	ENST00000637368	GDF6	Q6KF10	455 aa	Predicted RBP	6.46	□□□□□ -1.38
NRXN1-256	ENST00000637368	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	6.46	□□□□□ -1.38
NRXN1-256	ENST00000637368	ACAD11	Q709F0	780 aa		6.46	□□□□□ -1.38
NRXN1-256	ENST00000637368	TP53INP2	Q8IXH6	220 aa		6.46	□□□□□ -1.38
NRXN1-256	ENST00000637368	GIMAP7	Q8NHV1	300 aa		6.46	□□□□□ -1.38
NRXN1-256	ENST00000637368	KRTAP9-3	Q9BYQ3	159 aa		6.46	□□□□□ -1.38
NRXN1-256	ENST00000637368	HIF3A	Q9Y2N7	669 aa		6.46	□□□□□ -1.38
NRXN1-256	ENST00000637368	WISP1	O95388	367 aa		6.45	□□□□□ -1.38
NRXN1-256	ENST00000637368	FOSL1	P15407	271 aa		6.45	□□□□□ -1.38
NRXN1-256	ENST00000637368	VAC14	Q08AM6	782 aa		6.45	□□□□□ -1.38
NRXN1-256	ENST00000637368	PKN1	Q16512	942 aa		6.45	□□□□□ -1.38
NRXN1-256	ENST00000637368	BEND4	Q6ZU67	534 aa		6.45	□□□□□ -1.38
NRXN1-256	ENST00000637368	AGBL5	Q8NDL9	886 aa		6.45	□□□□□ -1.38
NRXN1-256	ENST00000637368	IFT43	Q96FT9	208 aa		6.45	□□□□□ -1.38
NRXN1-256	ENST00000637368	PAPLN	O95428	1278 aa		6.44	□□□□□ -1.38
NRXN1-256	ENST00000637368	SEMA3F	Q13275	785 aa		6.44	□□□□□ -1.38
NRXN1-256	ENST00000637368	COL19A1	Q14993	1142 aa		6.44	□□□□□ -1.38
NRXN1-256	ENST00000637368	GALNT11	Q8NCW6	608 aa		6.44	□□□□□ -1.38
NRXN1-256	ENST00000637368	LEMD3	Q9Y2U8	911 aa		6.44	□□□□□ -1.38
NRXN1-256	ENST00000637368	PRRG2	O14669	202 aa		6.43	□□□□□ -1.38
NRXN1-256	ENST00000637368	FARP2	O94887	1054 aa	Predicted RBP	6.43	□□□□□ -1.38
NRXN1-256	ENST00000637368	TARS	P26639	723 aa	Known RBP	6.43	□□□□□ -1.38
NRXN1-256	ENST00000637368	INPP5B	P32019	993 aa		6.43	□□□□□ -1.38
NRXN1-256	ENST00000637368	CD68	P34810	354 aa	Predicted RBP	6.43	□□□□□ -1.38
NRXN1-256	ENST00000637368	RTN1	Q16799	776 aa		6.43	□□□□□ -1.38
NRXN1-256	ENST00000637368	HFE2	Q6ZVN8	426 aa		6.43	□□□□□ -1.38
NRXN1-256	ENST00000637368	KRT25	Q7Z3Z0	450 aa		6.43	□□□□□ -1.38
NRXN1-256	ENST00000637368	NFATC2IP	Q8NCF5	419 aa		6.43	□□□□□ -1.38
NRXN1-256	ENST00000637368	TLR7	Q9NYK1	1049 aa	Known RBP	6.43	□□□□□ -1.38
NRXN1-256	ENST00000637368	PPME1	Q9Y570	386 aa		6.43	□□□□□ -1.38
NRXN1-256	ENST00000637368	PIK3CD	O00329	1044 aa		6.42	□□□□□ -1.38
NRXN1-256	ENST00000637368	PPP1R12B	O60237	982 aa	Predicted RBP	6.42	□□□□□ -1.38
NRXN1-256	ENST00000637368	HOXD8	P13378	290 aa	Predicted RBP	6.42	□□□□□ -1.38
NRXN1-256	ENST00000637368	NCOA4	Q13772	614 aa		6.42	□□□□□ -1.38
NRXN1-256	ENST00000637368	WASHC4	Q2M389	1173 aa		6.42	□□□□□ -1.38
NRXN1-256	ENST00000637368	KIAA1211	Q6ZU35	1233 aa		6.42	□□□□□ -1.38
NRXN1-256	ENST00000637368	C2orf49	Q9BVC5	232 aa	Predicted RBP	6.42	□□□□□ -1.38
NRXN1-256	ENST00000637368	RBSN	Q9H1K0	784 aa		6.42	□□□□□ -1.38
NRXN1-256	ENST00000637368	LOC102724428	A0A0B4J2F2	783 aa		6.41	□□□□□ -1.38

Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms