RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 ZDHHC13Q8IUH4 622 aa3.78□□□□□ -1.8
SCN1A-215ENST00000637285 TRPM4Q8TD43 1214 aa3.78□□□□□ -1.8
SCN1A-215ENST00000637285 TTC9Q92623 222 aa3.78□□□□□ -1.8
SCN1A-215ENST00000637285 ZFATQ9P243 1243 aa3.78□□□□□ -1.8
SCN1A-215ENST00000637285 KIAA1024Q9UPX6 916 aa3.78□□□□□ -1.8
SCN1A-215ENST00000637285 ZBTB7BO15156 539 aaPredicted RBP3.77□□□□□ -1.81
SCN1A-215ENST00000637285 DHX15O43143 795 aaKnown RBP3.77□□□□□ -1.81
SCN1A-215ENST00000637285 SASH3O75995 380 aa3.77□□□□□ -1.81
SCN1A-215ENST00000637285 RARAP10276 462 aa3.77□□□□□ -1.81
SCN1A-215ENST00000637285 EPB42P16452 691 aa3.77□□□□□ -1.81
SCN1A-215ENST00000637285 GPLD1P80108 840 aa3.77□□□□□ -1.81
SCN1A-215ENST00000637285 OGFOD2Q6N063 350 aa3.77□□□□□ -1.81
SCN1A-215ENST00000637285 POTEAQ6S8J7 498 aa3.77□□□□□ -1.81
SCN1A-215ENST00000637285 IL22RA1Q8N6P7 574 aa3.77□□□□□ -1.81
SCN1A-215ENST00000637285 TSEN2Q8NCE0 465 aaKnown RBP3.77□□□□□ -1.81
SCN1A-215ENST00000637285 UBL7Q96S82 380 aaPredicted RBP3.77□□□□□ -1.81
SCN1A-215ENST00000637285 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
SCN1A-215ENST00000637285 ADGRE2Q9UHX3 823 aa3.77□□□□□ -1.81
SCN1A-215ENST00000637285 TGFBR3LH3BV60 316 aa3.76□□□□□ -1.81
SCN1A-215ENST00000637285 C21orf2O43822 256 aa3.76□□□□□ -1.81
SCN1A-215ENST00000637285 GRNP28799 593 aaKnown RBP3.76□□□□□ -1.81
SCN1A-215ENST00000637285 ATP1A2P50993 1020 aa3.76□□□□□ -1.81
SCN1A-215ENST00000637285 NFIAQ12857 509 aa3.76□□□□□ -1.81
SCN1A-215ENST00000637285 IER5Q5VY09 327 aa3.76□□□□□ -1.81
SCN1A-215ENST00000637285 Q6ZS46 218 aa3.76□□□□□ -1.81
SCN1A-215ENST00000637285 DTX1Q86Y01 620 aa3.76□□□□□ -1.81
SCN1A-215ENST00000637285 TRIM42Q8IWZ5 723 aa3.76□□□□□ -1.81
SCN1A-215ENST00000637285 NFATC2IPQ8NCF5 419 aa3.76□□□□□ -1.81
SCN1A-215ENST00000637285 SCG3Q8WXD2 468 aaKnown RBP3.76□□□□□ -1.81
SCN1A-215ENST00000637285 PLD4Q96BZ4 506 aa3.76□□□□□ -1.81
SCN1A-215ENST00000637285 IFT43Q96FT9 208 aa3.76□□□□□ -1.81
SCN1A-215ENST00000637285 C7orf69Q9H7B7 122 aa3.76□□□□□ -1.81
SCN1A-215ENST00000637285 ATAD2Q6PL18 1390 aa3.76□□□□□ -1.81
SCN1A-215ENST00000637285 HMX2A2RU54 273 aa3.75□□□□□ -1.81
SCN1A-215ENST00000637285 J3QW42 95 aa3.75□□□□□ -1.81
SCN1A-215ENST00000637285 ARID4AP29374 1257 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-215ENST00000637285 IDH3AP50213 366 aa3.75□□□□□ -1.81
SCN1A-215ENST00000637285 CLDN10P78369 228 aa3.75□□□□□ -1.81
SCN1A-215ENST00000637285 ARMC10Q8N2F6 343 aa3.75□□□□□ -1.81
SCN1A-215ENST00000637285 UTP4Q969X6 686 aaKnown RBP3.75□□□□□ -1.81
SCN1A-215ENST00000637285 C2orf49Q9BVC5 232 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-215ENST00000637285 DMGDHQ9UI17 866 aaKnown RBP3.75□□□□□ -1.81
SCN1A-215ENST00000637285 BCS1LQ9Y276 419 aa3.75□□□□□ -1.81
SCN1A-215ENST00000637285 RBM19Q9Y4C8 960 aaKnown RBP3.75□□□□□ -1.81
SCN1A-215ENST00000637285 PRR19A6NJB7 356 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 GHRHP01286 108 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 C8AP07357 584 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 NRLP54845 237 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 SETDB1Q15047 1291 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 RTN1Q16799 776 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 RNF43Q68DV7 783 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 ACAD11Q709F0 780 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.74□□□□□ -1.81
SCN1A-215ENST00000637285 ABI1Q8IZP0 508 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 OGFOD1Q8N543 542 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 DCAF11Q8TEB1 546 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 ZNF594Q96JF6 807 aaPredicted RBP3.74□□□□□ -1.81
SCN1A-215ENST00000637285 DBNDD2Q9BQY9 259 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 CEP41Q9BYV8 373 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 ALG2Q9H553 416 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 SRA1Q9HD15 236 aaKnown RBP3.74□□□□□ -1.81
SCN1A-215ENST00000637285 KLK14Q9P0G3 267 aa3.74□□□□□ -1.81
SCN1A-215ENST00000637285 LOC102724428A0A0B4J2F2 783 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 USP17L3A6NCW0 530 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 USP17L4A6NCW7 530 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 PALM3A6NDB9 673 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-215ENST00000637285 M0R2N6 131 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 LGR5O75473 907 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 WISP1O95388 367 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 RASA1P20936 1047 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 INPP5BP32019 993 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 ARSDP51689 593 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 SIK1P57059 783 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 USP17L2Q6R6M4 530 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 USP17L1Q7RTZ2 530 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 MAP4K3Q8IVH8 894 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 STAG2Q8N3U4 1231 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 LARGE2Q8N3Y3 721 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 GAS2L2Q8NHY3 880 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 SHKBP1Q8TBC3 707 aa3.73□□□□□ -1.81
SCN1A-215ENST00000637285 NSUN5Q96P11 429 aaKnown RBP3.73□□□□□ -1.81
SCN1A-215ENST00000637285 TLR7Q9NYK1 1049 aaKnown RBP3.73□□□□□ -1.81
SCN1A-215ENST00000637285 WDR64B1ANS9 1081 aa3.72□□□□□ -1.81
SCN1A-215ENST00000637285 LINC01387J3KSC0 135 aa3.72□□□□□ -1.81
SCN1A-215ENST00000637285 PSAPP07602 524 aa3.72□□□□□ -1.81
SCN1A-215ENST00000637285 CDC25BP30305 580 aa3.72□□□□□ -1.81
SCN1A-215ENST00000637285 HOXA10P31260 410 aaPredicted RBP3.72□□□□□ -1.81
SCN1A-215ENST00000637285 GALNT11Q8NCW6 608 aa3.72□□□□□ -1.81
SCN1A-215ENST00000637285 RBSNQ9H1K0 784 aa3.72□□□□□ -1.81
SCN1A-215ENST00000637285 KCNF1Q9H3M0 494 aa3.72□□□□□ -1.81
SCN1A-215ENST00000637285 MKRN1Q9UHC7 482 aaKnown RBP3.72□□□□□ -1.81
SCN1A-215ENST00000637285 ANGEL1Q9UNK9 670 aaKnown RBP3.72□□□□□ -1.81
SCN1A-215ENST00000637285 TRIM33Q9UPN9 1127 aa3.72□□□□□ -1.81
SCN1A-215ENST00000637285 USP20Q9Y2K6 914 aa3.72□□□□□ -1.81
SCN1A-215ENST00000637285 MICAL2O94851 1124 aa3.71□□□□□ -1.82
SCN1A-215ENST00000637285 DGKZQ13574 1117 aa3.71□□□□□ -1.82
SCN1A-215ENST00000637285 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
SCN1A-215ENST00000637285 TXNDC11Q6PKC3 985 aa3.71□□□□□ -1.82
SCN1A-215ENST00000637285 ASIC4Q96FT7 647 aa3.71□□□□□ -1.82
SCN1A-215ENST00000637285 FAM46AQ96IP4 442 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms