RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 CACNA1FO60840 1977 aa18.31■□□□□ 0.52
CACNA1A-235ENST00000637004 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.31■□□□□ 0.52
CACNA1A-235ENST00000637004 GNAT3A8MTJ3 354 aa18.31■□□□□ 0.52
CACNA1A-235ENST00000637004 SLU7O95391 586 aaKnown RBP18.31■□□□□ 0.52
CACNA1A-235ENST00000637004 BLOC1S2Q6QNY1 142 aa18.31■□□□□ 0.52
CACNA1A-235ENST00000637004 ALDH8A1Q9H2A2 487 aaPredicted RBP18.31■□□□□ 0.52
CACNA1A-235ENST00000637004 CTAGE5O15320 804 aa18.31■□□□□ 0.52
CACNA1A-235ENST00000637004 IQCB1Q15051 598 aa18.31■□□□□ 0.52
CACNA1A-235ENST00000637004 HDGFL1Q5TGJ6 251 aa18.31■□□□□ 0.52
CACNA1A-235ENST00000637004 FBXO38Q6PIJ6 1188 aa18.31■□□□□ 0.52
CACNA1A-235ENST00000637004 LARP1Q6PKG0 1096 aaKnown RBP18.31■□□□□ 0.52
CACNA1A-235ENST00000637004 MAP4K1Q92918 833 aa18.31■□□□□ 0.52
CACNA1A-235ENST00000637004 KCND1Q9NSA2 647 aa18.31■□□□□ 0.52
CACNA1A-235ENST00000637004 CALCOCO1Q9P1Z2 691 aa18.31■□□□□ 0.52
CACNA1A-235ENST00000637004 DDX54Q8TDD1 881 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-235ENST00000637004 PEAK1Q9H792 1746 aa18.3■□□□□ 0.52
CACNA1A-235ENST00000637004 CADPS2Q86UW7 1296 aa18.3■□□□□ 0.52
CACNA1A-235ENST00000637004 PGBD1Q96JS3 809 aa18.3■□□□□ 0.52
CACNA1A-235ENST00000637004 ACEP12821 1306 aa18.29■□□□□ 0.52
CACNA1A-235ENST00000637004 USP27XA6NNY8 438 aa18.29■□□□□ 0.52
CACNA1A-235ENST00000637004 CDK11BP21127 795 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-235ENST00000637004 STX1AQ16623 288 aa18.29■□□□□ 0.52
CACNA1A-235ENST00000637004 CFAP45Q9UL16 551 aa18.29■□□□□ 0.52
CACNA1A-235ENST00000637004 FLT4P35916 1363 aa18.29■□□□□ 0.52
CACNA1A-235ENST00000637004 BECN2A8MW95 431 aa18.29■□□□□ 0.52
CACNA1A-235ENST00000637004 IFIT2P09913 472 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-235ENST00000637004 ELF2Q15723 593 aa18.29■□□□□ 0.52
CACNA1A-235ENST00000637004 CCAR2Q8N163 923 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-235ENST00000637004 IGSF1Q8N6C5 1336 aa18.28■□□□□ 0.52
CACNA1A-235ENST00000637004 CCDC69A6NI79 296 aa18.28■□□□□ 0.52
CACNA1A-235ENST00000637004 SLC27A2O14975 620 aa18.28■□□□□ 0.52
CACNA1A-235ENST00000637004 NBPF7P0C2Y1 421 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-235ENST00000637004 TAF7Q15545 349 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-235ENST00000637004 SOX12O15370 315 aa18.28■□□□□ 0.52
CACNA1A-235ENST00000637004 BMS1Q14692 1282 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-235ENST00000637004 ERC1Q8IUD2 1116 aa18.28■□□□□ 0.52
CACNA1A-235ENST00000637004 PHAXQ9H814 394 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-235ENST00000637004 SBNO1A3KN83 1393 aa18.28■□□□□ 0.52
CACNA1A-235ENST00000637004 NWD1Q149M9 1564 aa18.28■□□□□ 0.52
CACNA1A-235ENST00000637004 RPS6KB1P23443 525 aa18.27■□□□□ 0.52
CACNA1A-235ENST00000637004 GSDMDP57764 484 aa18.27■□□□□ 0.52
CACNA1A-235ENST00000637004 CHMP4AQ9BY43 222 aa18.27■□□□□ 0.52
CACNA1A-235ENST00000637004 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.27■□□□□ 0.52
CACNA1A-235ENST00000637004 V9GYY5 206 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-235ENST00000637004 PLEKHG3A1L390 1219 aa18.27■□□□□ 0.52
CACNA1A-235ENST00000637004 TOM1O60784 492 aa18.27■□□□□ 0.52
CACNA1A-235ENST00000637004 EYA1Q99502 592 aa18.27■□□□□ 0.52
CACNA1A-235ENST00000637004 ZSCAN16Q9H4T2 348 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-235ENST00000637004 CCZ1BP86790 482 aa18.27■□□□□ 0.51
CACNA1A-235ENST00000637004 CCZ1P86791 482 aaPredicted RBP18.27■□□□□ 0.51
CACNA1A-235ENST00000637004 USP6P35125 1406 aa18.26■□□□□ 0.51
CACNA1A-235ENST00000637004 ARID5BQ14865 1188 aa18.26■□□□□ 0.51
CACNA1A-235ENST00000637004 FILIP1Q7Z7B0 1213 aa18.26■□□□□ 0.51
CACNA1A-235ENST00000637004 SNRKQ9NRH2 765 aa18.26■□□□□ 0.51
CACNA1A-235ENST00000637004 MTX1Q13505 466 aa18.26■□□□□ 0.51
CACNA1A-235ENST00000637004 LMOD2Q6P5Q4 547 aa18.26■□□□□ 0.51
CACNA1A-235ENST00000637004 TRMT1Q9NXH9 659 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-235ENST00000637004 LRRC37A3O60309 1634 aa18.25■□□□□ 0.51
CACNA1A-235ENST00000637004 DNAAF4Q8WXU2 420 aa18.25■□□□□ 0.51
CACNA1A-235ENST00000637004 HMG20BQ9P0W2 317 aa18.25■□□□□ 0.51
CACNA1A-235ENST00000637004 USP16Q9Y5T5 823 aa18.25■□□□□ 0.51
CACNA1A-235ENST00000637004 NALCNQ8IZF0 1738 aa18.25■□□□□ 0.51
CACNA1A-235ENST00000637004 BEND3Q5T5X7 828 aa18.25■□□□□ 0.51
CACNA1A-235ENST00000637004 C11orf57Q6ZUT1 292 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-235ENST00000637004 BRINP3Q76B58 766 aa18.25■□□□□ 0.51
CACNA1A-235ENST00000637004 ANO10Q9NW15 660 aa18.25■□□□□ 0.51
CACNA1A-235ENST00000637004 XIRP1Q702N8 1843 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-235ENST00000637004 H3BQV1 296 aa18.24■□□□□ 0.51
CACNA1A-235ENST00000637004 AMPHP49418 695 aa18.24■□□□□ 0.51
CACNA1A-235ENST00000637004 RESTQ13127 1097 aa18.24■□□□□ 0.51
CACNA1A-235ENST00000637004 TOB2Q14106 344 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-235ENST00000637004 IFFO2Q5TF58 517 aa18.24■□□□□ 0.51
CACNA1A-235ENST00000637004 TUBB4AP04350 444 aa18.24■□□□□ 0.51
CACNA1A-235ENST00000637004 IRX5P78411 483 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-235ENST00000637004 NMIQ13287 307 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-235ENST00000637004 NUTM2GQ5VZR2 741 aa18.24■□□□□ 0.51
CACNA1A-235ENST00000637004 NGDNQ8NEJ9 315 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-235ENST00000637004 NOL10Q9BSC4 688 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-235ENST00000637004 IL17REQ8NFR9 667 aa18.23■□□□□ 0.51
CACNA1A-235ENST00000637004 FAM227BQ96M60 508 aa18.23■□□□□ 0.51
CACNA1A-235ENST00000637004 L2HGDHQ9H9P8 463 aa18.23■□□□□ 0.51
CACNA1A-235ENST00000637004 HDAC5Q9UQL6 1122 aa18.23■□□□□ 0.51
CACNA1A-235ENST00000637004 H2AFXP16104 143 aaPredicted RBP18.23■□□□□ 0.51
CACNA1A-235ENST00000637004 SNW1Q13573 536 aaKnown RBP18.23■□□□□ 0.51
CACNA1A-235ENST00000637004 TCEANC2Q96MN5 208 aa18.23■□□□□ 0.51
CACNA1A-235ENST00000637004 NAT10Q9H0A0 1025 aaKnown RBP18.23■□□□□ 0.51
CACNA1A-235ENST00000637004 IMPACTQ9P2X3 320 aa18.23■□□□□ 0.51
CACNA1A-235ENST00000637004 STK3Q13188 491 aa18.22■□□□□ 0.51
CACNA1A-235ENST00000637004 DHX8Q14562 1220 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-235ENST00000637004 TSGA10IPQ3SY00 556 aa18.22■□□□□ 0.51
CACNA1A-235ENST00000637004 CEP57L1Q8IYX8 460 aa18.22■□□□□ 0.51
CACNA1A-235ENST00000637004 ERICH4A6NGS2 130 aa18.22■□□□□ 0.51
CACNA1A-235ENST00000637004 KRT32Q14532 448 aa18.22■□□□□ 0.51
CACNA1A-235ENST00000637004 CCDC73Q6ZRK6 1079 aa18.22■□□□□ 0.51
CACNA1A-235ENST00000637004 BRF1Q92994 677 aa18.22■□□□□ 0.51
CACNA1A-235ENST00000637004 ZNF446Q9NWS9 450 aa18.22■□□□□ 0.51
CACNA1A-235ENST00000637004 SLC20A2Q08357 652 aa18.22■□□□□ 0.51
CACNA1A-235ENST00000637004 AACSQ86V21 672 aa18.22■□□□□ 0.51
CACNA1A-235ENST00000637004 GTF3C6Q969F1 213 aa18.22■□□□□ 0.51
CACNA1A-235ENST00000637004 OSBPL5Q9H0X9 879 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms