RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 CCDC124Q96CT7 223 aaKnown RBP6.81□□□□□ -1.32
SCN1A-212ENST00000636194 HYPKQ9NX55 129 aa6.81□□□□□ -1.32
SCN1A-212ENST00000636194 A0A1B0GUL7 405 aa6.81□□□□□ -1.32
SCN1A-212ENST00000636194 MTIF2P46199 727 aaKnown RBP6.81□□□□□ -1.32
SCN1A-212ENST00000636194 LACTBP83111 547 aaPredicted RBP6.81□□□□□ -1.32
SCN1A-212ENST00000636194 CCDC40Q4G0X9 1142 aa6.81□□□□□ -1.32
SCN1A-212ENST00000636194 MAP3K21Q5TCX8 1036 aa6.81□□□□□ -1.32
SCN1A-212ENST00000636194 RUFY3Q7L099 469 aa6.81□□□□□ -1.32
SCN1A-212ENST00000636194 CABP5Q9NP86 173 aa6.81□□□□□ -1.32
SCN1A-212ENST00000636194 MKL2Q9ULH7 1088 aa6.81□□□□□ -1.32
SCN1A-212ENST00000636194 GOLGA8CPA6NN73 597 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 E7EVH7 732 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 EFCAB14O75071 495 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 BAG3O95817 575 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 LIG1P18858 919 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 RUNDC1Q96C34 613 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 XAB2Q9HCS7 855 aaKnown RBP6.8□□□□□ -1.32
SCN1A-212ENST00000636194 FAM13AO94988 1023 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 CAVIN2O95810 425 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 KRT3P12035 628 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 FYB2Q5VWT5 728 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 KHDRBS2Q5VWX1 349 aaKnown RBP6.8□□□□□ -1.32
SCN1A-212ENST00000636194 PRPF38AQ8NAV1 312 aaKnown RBP6.8□□□□□ -1.32
SCN1A-212ENST00000636194 ATP6V0A1Q93050 837 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 CTAGE1Q96RT6 745 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 ANO10Q9NW15 660 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 RMND1Q9NWS8 449 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 PLEKHH1Q9ULM0 1364 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 GTF2A1P52655 376 aaPredicted RBP6.8□□□□□ -1.32
SCN1A-212ENST00000636194 PPP4R4Q6NUP7 873 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 ZNF622Q969S3 477 aaKnown RBP eCLIP6.8□□□□□ -1.32
SCN1A-212ENST00000636194 BAG1Q99933 345 aaPredicted RBP6.8□□□□□ -1.32
SCN1A-212ENST00000636194 AFG3L2Q9Y4W6 797 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 POTEB3A0JP26 581 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 RRP9O43818 475 aaKnown RBP6.8□□□□□ -1.32
SCN1A-212ENST00000636194 CALM1P0DP23 149 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 CALM2P0DP24 149 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 CALM3P0DP25 149 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 HSPA5P11021 654 aaKnown RBP6.8□□□□□ -1.32
SCN1A-212ENST00000636194 GBP1P32455 592 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 GNL1P36915 607 aaPredicted RBP6.8□□□□□ -1.32
SCN1A-212ENST00000636194 POTEBQ6S5H4 581 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 IFT81Q8WYA0 676 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 C16orf72Q14CZ0 275 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 SLC4A8Q2Y0W8 1093 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 MIER3Q7Z3K6 550 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 SDCCAG3Q96C92 435 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 BIN2Q9UBW5 565 aaPredicted RBP6.8□□□□□ -1.32
SCN1A-212ENST00000636194 SFMBT1Q9UHJ3 866 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 BAG5Q9UL15 447 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 PDE4BQ07343 736 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 ACBD5Q5T8D3 534 aaPredicted RBP6.8□□□□□ -1.32
SCN1A-212ENST00000636194 NUCKS1Q9H1E3 243 aaKnown RBP6.8□□□□□ -1.32
SCN1A-212ENST00000636194 TRAK1Q9UPV9 953 aa6.8□□□□□ -1.32
SCN1A-212ENST00000636194 NUCB1Q02818 461 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 TRIML1Q8N9V2 468 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 SEC62Q99442 399 aaKnown RBP6.79□□□□□ -1.32
SCN1A-212ENST00000636194 HSPA1LP34931 641 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 DIXDC1Q155Q3 683 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 TRIM60Q495X7 471 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 ABTB2Q8N961 1025 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 NAPBQ9H115 298 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 DHX57Q6P158 1386 aaKnown RBP6.79□□□□□ -1.32
SCN1A-212ENST00000636194 SMIM24O75264 130 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 ITIH3Q06033 890 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 CCDC62Q6P9F0 684 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 AFAP1L1Q8TED9 768 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 ZNF830Q96NB3 372 aaPredicted RBP6.79□□□□□ -1.32
SCN1A-212ENST00000636194 EXOC1Q9NV70 894 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 SAMD15Q9P1V8 674 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 CEP126Q9P2H0 1117 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 SERPINI2O75830 405 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 FCHSD2O94868 740 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 ATICP31939 592 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 MTRF1LQ9UGC7 380 aaKnown RBP6.79□□□□□ -1.32
SCN1A-212ENST00000636194 TEKT2Q9UIF3 430 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 PNMA2Q9UL42 364 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 ARID5AQ03989 594 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 TAF11Q15544 211 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 CCDC121Q6ZUS5 278 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 CXorf38Q8TB03 319 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 TNPO1Q92973 898 aaKnown RBP6.79□□□□□ -1.32
SCN1A-212ENST00000636194 DAAM1Q9Y4D1 1078 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 MAP3K7O43318 606 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 AMOTQ4VCS5 1084 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 KLHL10Q6JEL2 608 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 ZNF449Q6P9G9 518 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 PATL1Q86TB9 770 aaKnown RBP6.79□□□□□ -1.32
SCN1A-212ENST00000636194 CNGA4Q8IV77 575 aa6.79□□□□□ -1.32
SCN1A-212ENST00000636194 ESYT2A0FGR8 921 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 MAP3K12Q12852 859 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 CEP57Q86XR8 500 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 ORC6Q9Y5N6 252 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 KAT6AQ92794 2004 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 CNTRLQ7Z7A1 2325 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 TRAK2O60296 914 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 CTAGE8P0CG41 777 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 DNA2P51530 1060 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 NEDD9Q14511 834 aa6.78□□□□□ -1.32
SCN1A-212ENST00000636194 TAF7Q15545 349 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms