RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 SLC4A10Q6U841 1118 aa19.08■□□□□ 0.65
CLN8-209ENST00000635970 NEURL1BA8MQ27 555 aa19.08■□□□□ 0.64
CLN8-209ENST00000635970 TRIM28Q13263 835 aaKnown RBP19.08■□□□□ 0.64
CLN8-209ENST00000635970 KIF16BQ96L93 1317 aa19.07■□□□□ 0.64
CLN8-209ENST00000635970 A0A0G2JLW4 131 aa19.07■□□□□ 0.64
CLN8-209ENST00000635970 JARID2Q92833 1246 aaPredicted RBP19.07■□□□□ 0.64
CLN8-209ENST00000635970 FAM89AQ96GI7 184 aa19.07■□□□□ 0.64
CLN8-209ENST00000635970 CWC25Q9NXE8 425 aaPredicted RBP19.07■□□□□ 0.64
CLN8-209ENST00000635970 DPEP1P16444 411 aa19.06■□□□□ 0.64
CLN8-209ENST00000635970 BEND3Q5T5X7 828 aa19.06■□□□□ 0.64
CLN8-209ENST00000635970 CCDC191Q8NCU4 936 aa19.06■□□□□ 0.64
CLN8-209ENST00000635970 UBE2Q2Q8WVN8 375 aa19.06■□□□□ 0.64
CLN8-209ENST00000635970 DDX11L8A8MPP1 907 aa19.06■□□□□ 0.64
CLN8-209ENST00000635970 BRIP1Q9BX63 1249 aa19.06■□□□□ 0.64
CLN8-209ENST00000635970 TNNQ9UQP3 1299 aa19.06■□□□□ 0.64
CLN8-209ENST00000635970 SH3TC1Q8TE82 1336 aa19.05■□□□□ 0.64
CLN8-209ENST00000635970 LINS1Q8NG48 757 aa19.05■□□□□ 0.64
CLN8-209ENST00000635970 MYH3P11055 1940 aa19.04■□□□□ 0.64
CLN8-209ENST00000635970 HCLS1P14317 486 aaPredicted RBP19.04■□□□□ 0.64
CLN8-209ENST00000635970 TGFB2P61812 414 aa19.04■□□□□ 0.64
CLN8-209ENST00000635970 C3orf67Q6ZVT6 689 aa19.04■□□□□ 0.64
CLN8-209ENST00000635970 SMC5Q8IY18 1101 aa19.04■□□□□ 0.64
CLN8-209ENST00000635970 RIC1Q4ADV7 1423 aa19.04■□□□□ 0.64
CLN8-209ENST00000635970 PTMSP20962 102 aa19.04■□□□□ 0.64
CLN8-209ENST00000635970 KCNA3P22001 575 aa19.04■□□□□ 0.64
CLN8-209ENST00000635970 C2CD5Q86YS7 1000 aa19.04■□□□□ 0.64
CLN8-209ENST00000635970 TAF1P21675 1872 aa19.03■□□□□ 0.64
CLN8-209ENST00000635970 PDE6BP35913 854 aa19.03■□□□□ 0.64
CLN8-209ENST00000635970 MRE11P49959 708 aa19.03■□□□□ 0.64
CLN8-209ENST00000635970 GCKRQ14397 625 aa19.03■□□□□ 0.64
CLN8-209ENST00000635970 HSCBQ8IWL3 235 aa19.03■□□□□ 0.64
CLN8-209ENST00000635970 ZBTB38Q8NAP3 1195 aaPredicted RBP19.03■□□□□ 0.64
CLN8-209ENST00000635970 EIF5BO60841 1220 aaKnown RBP19.02■□□□□ 0.64
CLN8-209ENST00000635970 TRIM27P14373 513 aa19.02■□□□□ 0.64
CLN8-209ENST00000635970 SNX21Q969T3 373 aa19.02■□□□□ 0.64
CLN8-209ENST00000635970 IPO8O15397 1037 aaKnown RBP19.02■□□□□ 0.64
CLN8-209ENST00000635970 XRCC6P12956 609 aaKnown RBP eCLIP19.02■□□□□ 0.647e-9■■■■■ 47.1
CLN8-209ENST00000635970 ATF7IPQ6VMQ6 1270 aa19.02■□□□□ 0.64
CLN8-209ENST00000635970 SRCIN1Q9C0H9 1055 aa19.02■□□□□ 0.64
CLN8-209ENST00000635970 PCCAP05165 728 aaPredicted RBP19.01■□□□□ 0.63
CLN8-209ENST00000635970 UBE3BQ7Z3V4 1068 aa19.01■□□□□ 0.63
CLN8-209ENST00000635970 API5Q9BZZ5 524 aaKnown RBP19.01■□□□□ 0.63
CLN8-209ENST00000635970 CIZ1Q9ULV3 898 aaPredicted RBP19.01■□□□□ 0.63
CLN8-209ENST00000635970 H0YIN7 160 aa19.01■□□□□ 0.63
CLN8-209ENST00000635970 IRS4O14654 1257 aaPredicted RBP19.01■□□□□ 0.63
CLN8-209ENST00000635970 TRAK2O60296 914 aa19.01■□□□□ 0.63
CLN8-209ENST00000635970 RBM25P49756 843 aaKnown RBP19.01■□□□□ 0.63
CLN8-209ENST00000635970 CHMP4BQ9H444 224 aaKnown RBP19.01■□□□□ 0.63
CLN8-209ENST00000635970 SLX4Q8IY92 1834 aa19■□□□□ 0.63
CLN8-209ENST00000635970 ARFGEF1Q9Y6D6 1849 aa19■□□□□ 0.63
CLN8-209ENST00000635970 SRGNP10124 158 aa19■□□□□ 0.63
CLN8-209ENST00000635970 SLC10A5Q5PT55 438 aa19■□□□□ 0.63
CLN8-209ENST00000635970 ARHGAP45Q92619 1136 aa19■□□□□ 0.63
CLN8-209ENST00000635970 ABCC4O15439 1325 aa19■□□□□ 0.63
CLN8-209ENST00000635970 COL4A1P02462 1669 aa18.99■□□□□ 0.63
CLN8-209ENST00000635970 KLRG2A4D1S0 409 aaPredicted RBP18.99■□□□□ 0.63
CLN8-209ENST00000635970 CLCN1P35523 988 aa18.99■□□□□ 0.63
CLN8-209ENST00000635970 ZNF622Q969S3 477 aaKnown RBP eCLIP18.99■□□□□ 0.63
CLN8-209ENST00000635970 CRY2Q49AN0 593 aa18.99■□□□□ 0.63
CLN8-209ENST00000635970 NLRP3Q96P20 1036 aa18.99■□□□□ 0.63
CLN8-209ENST00000635970 RRAGDQ9NQL2 400 aaPredicted RBP18.99■□□□□ 0.63
CLN8-209ENST00000635970 H7C1W4 665 aa18.98■□□□□ 0.63
CLN8-209ENST00000635970 ALDH1L1O75891 902 aa18.98■□□□□ 0.63
CLN8-209ENST00000635970 YBX3P16989 372 aaKnown RBP eCLIP18.98■□□□□ 0.63
CLN8-209ENST00000635970 MFAP1P55081 439 aaKnown RBP18.98■□□□□ 0.63
CLN8-209ENST00000635970 CDHR2Q9BYE9 1310 aa18.98■□□□□ 0.63
CLN8-209ENST00000635970 CASP7P55210 303 aa18.97■□□□□ 0.63
CLN8-209ENST00000635970 PIM2Q9P1W9 311 aa18.97■□□□□ 0.63
CLN8-209ENST00000635970 GRM8O00222 908 aa18.97■□□□□ 0.63
CLN8-209ENST00000635970 MASTLQ96GX5 879 aa18.97■□□□□ 0.63
CLN8-209ENST00000635970 BCS1LQ9Y276 419 aa18.97■□□□□ 0.63
CLN8-209ENST00000635970 SPEF2Q9C093 1822 aa18.97■□□□□ 0.63
CLN8-209ENST00000635970 DDIT3P35638 169 aa18.96■□□□□ 0.63
CLN8-209ENST00000635970 SKOR2Q2VWA4 1001 aaPredicted RBP18.96■□□□□ 0.63
CLN8-209ENST00000635970 ZBTB40Q9NUA8 1239 aa18.96■□□□□ 0.63
CLN8-209ENST00000635970 C9orf78Q9NZ63 289 aaPredicted RBP18.96■□□□□ 0.63
CLN8-209ENST00000635970 NBPF7P0C2Y1 421 aaPredicted RBP18.95■□□□□ 0.62
CLN8-209ENST00000635970 NPR1P16066 1061 aa18.95■□□□□ 0.62
CLN8-209ENST00000635970 ITPRIPQ8IWB1 547 aa18.95■□□□□ 0.62
CLN8-209ENST00000635970 RPGRQ92834 1020 aaKnown RBP18.95■□□□□ 0.62
CLN8-209ENST00000635970 CCDC85AQ96PX6 553 aaPredicted RBP18.95■□□□□ 0.62
CLN8-209ENST00000635970 CCT4P50991 539 aaKnown RBP18.95■□□□□ 0.62
CLN8-209ENST00000635970 NUCB1Q02818 461 aa18.95■□□□□ 0.62
CLN8-209ENST00000635970 STYK1Q6J9G0 422 aa18.95■□□□□ 0.62
CLN8-209ENST00000635970 PDE8AO60658 829 aa18.94■□□□□ 0.62
CLN8-209ENST00000635970 GPR162Q16538 588 aa18.94■□□□□ 0.62
CLN8-209ENST00000635970 DALRD3Q5D0E6 543 aaKnown RBP18.94■□□□□ 0.62
CLN8-209ENST00000635970 SLC51AQ86UW1 340 aa18.94■□□□□ 0.62
CLN8-209ENST00000635970 TMEM57Q8N5G2 664 aa18.93■□□□□ 0.62
CLN8-209ENST00000635970 TTLL6Q8N841 843 aa18.93■□□□□ 0.62
CLN8-209ENST00000635970 GBP4Q96PP9 640 aa18.93■□□□□ 0.62
CLN8-209ENST00000635970 USP44Q9H0E7 712 aa18.93■□□□□ 0.62
CLN8-209ENST00000635970 INTS3Q68E01 1043 aaKnown RBP18.93■□□□□ 0.62
CLN8-209ENST00000635970 PRPF40BQ6NWY9 871 aaKnown RBP18.93■□□□□ 0.62
CLN8-209ENST00000635970 ZNF219Q9P2Y4 722 aaPredicted RBP18.93■□□□□ 0.62
CLN8-209ENST00000635970 CTSWP56202 376 aa18.92■□□□□ 0.62
CLN8-209ENST00000635970 UTYO14607 1347 aa18.92■□□□□ 0.62
CLN8-209ENST00000635970 HOXA10P31260 410 aaPredicted RBP18.92■□□□□ 0.62
CLN8-209ENST00000635970 SF3B3Q15393 1217 aaKnown RBP18.92■□□□□ 0.62
CLN8-209ENST00000635970 BMP2KLQ5H9B9 411 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms