RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TRIM7Q9C029 511 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 FMNL3Q8IVF7 1028 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 RNF34Q969K3 372 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 CCDC183Q5T5S1 534 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 ZNF804AQ7Z570 1209 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 CPLX3Q8WVH0 158 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 IL1RAPL2Q9NP60 686 aa6.32□□□□□ -1.4
SCN1A-209ENST00000635750 STAT6P42226 847 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 CCDC114Q96M63 670 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 NYXQ9GZU5 481 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 ANKRD30BQ9BXX2 1392 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 EPRSP07814 1512 aaKnown RBP6.31□□□□□ -1.4
SCN1A-209ENST00000635750 GNAQP50148 359 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 KIFC2Q96AC6 838 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 TOP2AP11388 1531 aaKnown RBP6.31□□□□□ -1.4
SCN1A-209ENST00000635750 ATAD2Q6PL18 1390 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 CALM1P0DP23 149 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 CALM2P0DP24 149 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 CALM3P0DP25 149 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 ARID4AP29374 1257 aaPredicted RBP6.31□□□□□ -1.4
SCN1A-209ENST00000635750 TAF7Q15545 349 aaPredicted RBP6.31□□□□□ -1.4
SCN1A-209ENST00000635750 IFIT1BQ5T764 474 aaKnown RBP6.31□□□□□ -1.4
SCN1A-209ENST00000635750 VPS52Q8N1B4 723 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 NSMCE1Q8WV22 266 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 RAB3IPQ96QF0 476 aaPredicted RBP6.31□□□□□ -1.4
SCN1A-209ENST00000635750 CWC25Q9NXE8 425 aaPredicted RBP6.31□□□□□ -1.4
SCN1A-209ENST00000635750 STX8Q9UNK0 236 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 ADAMTS8Q9UP79 889 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 NEMFO60524 1076 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 STK10O94804 968 aaKnown RBP6.31□□□□□ -1.4
SCN1A-209ENST00000635750 HSPA4P34932 840 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 PLCB3Q01970 1234 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 RPAP2Q8IXW5 612 aaPredicted RBP6.31□□□□□ -1.4
SCN1A-209ENST00000635750 TRIM47Q96LD4 638 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 SPAG5Q96R06 1193 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 CTAGE1Q96RT6 745 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 VEZTQ9HBM0 779 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 SWAP70Q9UH65 585 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 PARP3Q9Y6F1 533 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 FANCIQ9NVI1 1328 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 IARSP41252 1262 aaKnown RBP6.31□□□□□ -1.4
SCN1A-209ENST00000635750 CEP128Q6ZU80 1094 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 BMP15O95972 392 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 PROCA1Q8NCQ7 364 aaPredicted RBP6.31□□□□□ -1.4
SCN1A-209ENST00000635750 PICK1Q9NRD5 415 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 TMOD4Q9NZQ9 345 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 FAM184BQ9ULE4 1060 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 TACC3Q9Y6A5 838 aa6.31□□□□□ -1.4
SCN1A-209ENST00000635750 METAP2P50579 478 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCN1A-209ENST00000635750 RRS1Q15050 365 aaKnown RBP6.3□□□□□ -1.4
SCN1A-209ENST00000635750 NUTM1Q86Y26 1132 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 CCDC125Q86Z20 511 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 CDAN1Q8IWY9 1227 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 TMTC2Q8N394 836 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 TRIM6Q9C030 488 aaPredicted RBP6.3□□□□□ -1.4
SCN1A-209ENST00000635750 KRT23Q9C075 422 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 ATP6V1E1P36543 226 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 GUCY1B3Q02153 619 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 MAP7Q14244 749 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 TSR2Q969E8 191 aaKnown RBP6.3□□□□□ -1.4
SCN1A-209ENST00000635750 E7EVH7 732 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 SLC4A8Q2Y0W8 1093 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 USP25Q9UHP3 1055 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 M0QZ92 97 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 CYLC1P35663 651 aaPredicted RBP6.3□□□□□ -1.4
SCN1A-209ENST00000635750 STX1AQ16623 288 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 ANKRD50Q9ULJ7 1429 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 DAPK3O43293 454 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 GPTP24298 496 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 RASA3Q14644 834 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 MUM1L1Q5H9M0 696 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 SRGAP1Q7Z6B7 1085 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 KIF21BO75037 1637 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 TMEM110-MUSTN1A8MSY1 372 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 KIF3CO14782 793 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 UQCRFS1P1P0C7P4 283 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 ARID5AQ03989 594 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 LDHAL6AQ6ZMR3 332 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 MCM10Q7L590 875 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 GRPEL1Q9HAV7 217 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 SEPT10Q9P0V9 454 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 AGTPBP1Q9UPW5 1226 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 FCHSD2O94868 740 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 XRCC6P12956 609 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCN1A-209ENST00000635750 PLCG2P16885 1265 aa6.3□□□□□ -1.4
SCN1A-209ENST00000635750 SARNPP82979 210 aaKnown RBP6.3□□□□□ -1.4
SCN1A-209ENST00000635750 CIZ1Q9ULV3 898 aaPredicted RBP6.3□□□□□ -1.4
SCN1A-209ENST00000635750 ECM2O94769 699 aaPredicted RBP6.29□□□□□ -1.4
SCN1A-209ENST00000635750 GJC1P36383 396 aa6.29□□□□□ -1.4
SCN1A-209ENST00000635750 PRPF40BQ6NWY9 871 aaKnown RBP6.29□□□□□ -1.4
SCN1A-209ENST00000635750 HEATR3Q7Z4Q2 680 aa6.29□□□□□ -1.4
SCN1A-209ENST00000635750 HACE1Q8IYU2 909 aa6.29□□□□□ -1.4
SCN1A-209ENST00000635750 NCOA7Q8NI08 942 aa6.29□□□□□ -1.4
SCN1A-209ENST00000635750 PPP2R1AP30153 589 aa6.29□□□□□ -1.4
SCN1A-209ENST00000635750 DUSP27Q5VZP5 1158 aa6.29□□□□□ -1.4
SCN1A-209ENST00000635750 EP400NLQ6ZTU2 488 aa6.29□□□□□ -1.4
SCN1A-209ENST00000635750 KIFAP3Q92845 792 aa6.29□□□□□ -1.4
SCN1A-209ENST00000635750 STX10O60499 249 aa6.29□□□□□ -1.4
SCN1A-209ENST00000635750 TOM1O60784 492 aa6.29□□□□□ -1.4
SCN1A-209ENST00000635750 CALML3P27482 149 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms