RNA–Protein interactions for RNA: ENST00000635614.1

CD55-211, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 1,145 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-211ENST00000635614 GRIPAP1Q4V328 841 aa13.48□□□□□ -0.25
CD55-211ENST00000635614 DDX21Q9NR30 783 aaKnown RBP eCLIP13.48□□□□□ -0.25
CD55-211ENST00000635614 IFT57Q9NWB7 429 aa13.48□□□□□ -0.25
CD55-211ENST00000635614 RNF181Q9P0P0 153 aa13.48□□□□□ -0.25
CD55-211ENST00000635614 DBF4Q9UBU7 674 aaPredicted RBP13.48□□□□□ -0.25
CD55-211ENST00000635614 RNF123Q5XPI4 1314 aa13.47□□□□□ -0.25
CD55-211ENST00000635614 KLRG2A4D1S0 409 aaPredicted RBP13.47□□□□□ -0.25
CD55-211ENST00000635614 HLFQ16534 295 aa13.47□□□□□ -0.25
CD55-211ENST00000635614 TMX4Q9H1E5 349 aaPredicted RBP13.47□□□□□ -0.25
CD55-211ENST00000635614 COLQQ9Y215 455 aaPredicted RBP13.47□□□□□ -0.25
CD55-211ENST00000635614 SEC24BO95487 1268 aa13.46□□□□□ -0.25
CD55-211ENST00000635614 MLLT3P42568 568 aaPredicted RBP13.46□□□□□ -0.25
CD55-211ENST00000635614 CCDC27Q2M243 656 aa13.46□□□□□ -0.25
CD55-211ENST00000635614 HDGFL1Q5TGJ6 251 aa13.46□□□□□ -0.25
CD55-211ENST00000635614 C16orf71Q8IYS4 520 aaPredicted RBP13.46□□□□□ -0.25
CD55-211ENST00000635614 ZNF526Q8TF50 670 aaPredicted RBP13.46□□□□□ -0.25
CD55-211ENST00000635614 SLC39A7Q92504 469 aa13.46□□□□□ -0.25
CD55-211ENST00000635614 ZBTB3Q9H5J0 574 aa13.46□□□□□ -0.25
CD55-211ENST00000635614 MRS2Q9HD23 443 aa13.46□□□□□ -0.25
CD55-211ENST00000635614 HYPKQ9NX55 129 aa13.46□□□□□ -0.25
CD55-211ENST00000635614 NUP98P52948 1817 aa13.46□□□□□ -0.26
CD55-211ENST00000635614 LTBP3Q9NS15 1303 aa13.45□□□□□ -0.26
CD55-211ENST00000635614 CC2D2BQ6DHV5 1058 aa13.45□□□□□ -0.26
CD55-211ENST00000635614 TTLL7Q6ZT98 887 aa13.45□□□□□ -0.26
CD55-211ENST00000635614 RTKN2Q8IZC4 609 aa13.45□□□□□ -0.26
CD55-211ENST00000635614 FAM177BA6PVY3 158 aa13.44□□□□□ -0.26
CD55-211ENST00000635614 C21orf2O43822 256 aa13.44□□□□□ -0.26
CD55-211ENST00000635614 HSP90B1P14625 803 aaKnown RBP13.44□□□□□ -0.26
CD55-211ENST00000635614 CCDC93Q567U6 631 aa13.44□□□□□ -0.26
CD55-211ENST00000635614 DUSP27Q5VZP5 1158 aa13.44□□□□□ -0.26
CD55-211ENST00000635614 PRPF40BQ6NWY9 871 aaKnown RBP13.44□□□□□ -0.26
CD55-211ENST00000635614 COPS6Q7L5N1 327 aa13.44□□□□□ -0.26
CD55-211ENST00000635614 ZNF34Q8IZ26 560 aa13.44□□□□□ -0.26
CD55-211ENST00000635614 RPGRQ92834 1020 aaKnown RBP13.44□□□□□ -0.26
CD55-211ENST00000635614 NLRP3Q96P20 1036 aa13.44□□□□□ -0.26
CD55-211ENST00000635614 UTP14AQ9BVJ6 771 aaKnown RBP13.44□□□□□ -0.26
CD55-211ENST00000635614 TAOK3Q9H2K8 898 aa13.44□□□□□ -0.26
CD55-211ENST00000635614 ANKRD31Q8N7Z5 1873 aa13.44□□□□□ -0.26
CD55-211ENST00000635614 TOMM70O94826 608 aa13.43□□□□□ -0.26
CD55-211ENST00000635614 SBF1O95248 1867 aa13.43□□□□□ -0.26
CD55-211ENST00000635614 ZNF853P0CG23 659 aa13.43□□□□□ -0.26
CD55-211ENST00000635614 AIMP1Q12904 312 aaKnown RBP13.43□□□□□ -0.26
CD55-211ENST00000635614 CCDC24Q8N4L8 307 aa13.43□□□□□ -0.26
CD55-211ENST00000635614 RBM17Q96I25 401 aaKnown RBP13.43□□□□□ -0.26
CD55-211ENST00000635614 MBIPQ9NS73 344 aa13.43□□□□□ -0.26
CD55-211ENST00000635614 RIC1Q4ADV7 1423 aa13.42□□□□□ -0.26
CD55-211ENST00000635614 ZMYND10O75800 440 aa13.42□□□□□ -0.26
CD55-211ENST00000635614 C7P10643 843 aa13.42□□□□□ -0.26
CD55-211ENST00000635614 GPTP24298 496 aa13.42□□□□□ -0.26
CD55-211ENST00000635614 TCIRG1Q13488 830 aa13.42□□□□□ -0.26
CD55-211ENST00000635614 CCDC30Q5VVM6 783 aa13.42□□□□□ -0.26
CD55-211ENST00000635614 TMEM92Q6UXU6 159 aa13.42□□□□□ -0.26
CD55-211ENST00000635614 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
CD55-211ENST00000635614 PLBD2Q8NHP8 589 aa13.42□□□□□ -0.26
CD55-211ENST00000635614 XAGE3Q8WTP9 111 aa13.42□□□□□ -0.26
CD55-211ENST00000635614 SENP3-EIF4A1A0A087X0R7 540 aa13.41□□□□□ -0.26
CD55-211ENST00000635614 DDX58O95786 925 aaKnown RBP13.41□□□□□ -0.26
CD55-211ENST00000635614 CRY2Q49AN0 593 aa13.41□□□□□ -0.26
CD55-211ENST00000635614 ERFEQ4G0M1 354 aa13.41□□□□□ -0.26
CD55-211ENST00000635614 SLC10A5Q5PT55 438 aa13.41□□□□□ -0.26
CD55-211ENST00000635614 SUSD4Q5VX71 490 aa13.41□□□□□ -0.26
CD55-211ENST00000635614 LRP10Q7Z4F1 713 aa13.41□□□□□ -0.26
CD55-211ENST00000635614 NECTIN2Q92692 538 aa13.41□□□□□ -0.26
CD55-211ENST00000635614 CHPF2Q9P2E5 772 aa13.41□□□□□ -0.26
CD55-211ENST00000635614 IL16Q14005 1332 aa13.4□□□□□ -0.26
CD55-211ENST00000635614 ARFGEF2Q9Y6D5 1785 aa13.4□□□□□ -0.26
CD55-211ENST00000635614 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
CD55-211ENST00000635614 GLTPD2A6NH11 291 aa13.4□□□□□ -0.26
CD55-211ENST00000635614 HOXA10P31260 410 aaPredicted RBP13.4□□□□□ -0.26
CD55-211ENST00000635614 NUTM1Q86Y26 1132 aa13.4□□□□□ -0.26
CD55-211ENST00000635614 CRAMP1Q96RY5 1269 aa13.4□□□□□ -0.26
CD55-211ENST00000635614 NFKBIEO00221 500 aa13.39□□□□□ -0.27
CD55-211ENST00000635614 NTSR2O95665 410 aa13.39□□□□□ -0.27
CD55-211ENST00000635614 VEGFAP15692 232 aaPredicted RBP13.39□□□□□ -0.27
CD55-211ENST00000635614 RASSF7Q02833 373 aa13.39□□□□□ -0.27
CD55-211ENST00000635614 RBM26Q5T8P6 1007 aaKnown RBP13.39□□□□□ -0.27
CD55-211ENST00000635614 RIC3Q7Z5B4 369 aa13.39□□□□□ -0.27
CD55-211ENST00000635614 STK31Q9BXU1 1019 aa13.39□□□□□ -0.27
CD55-211ENST00000635614 TRMT112Q9UI30 125 aaKnown RBP13.39□□□□□ -0.27
CD55-211ENST00000635614 UBN2Q6ZU65 1347 aa13.39□□□□□ -0.27
CD55-211ENST00000635614 SH3TC1Q8TE82 1336 aa13.39□□□□□ -0.27
CD55-211ENST00000635614 FER1L6Q2WGJ9 1857 aa13.38□□□□□ -0.27
CD55-211ENST00000635614 FKBP4Q02790 459 aaKnown RBP eCLIP13.38□□□□□ -0.27
CD55-211ENST00000635614 FSTL1Q12841 308 aa13.38□□□□□ -0.27
CD55-211ENST00000635614 PROSER3Q2NL68 480 aa13.38□□□□□ -0.27
CD55-211ENST00000635614 TMC4Q7Z404 712 aa13.38□□□□□ -0.27
CD55-211ENST00000635614 WDR63Q8IWG1 891 aa13.38□□□□□ -0.27
CD55-211ENST00000635614 WWC1Q8IX03 1113 aa13.38□□□□□ -0.27
CD55-211ENST00000635614 RBM46Q8TBY0 533 aaKnown RBP13.38□□□□□ -0.27
CD55-211ENST00000635614 C7orf43Q8WVR3 580 aa13.38□□□□□ -0.27
CD55-211ENST00000635614 VPS33BQ9H267 617 aa13.38□□□□□ -0.27
CD55-211ENST00000635614 CCDC88AQ3V6T2 1871 aa13.38□□□□□ -0.27
CD55-211ENST00000635614 DICER1Q9UPY3 1922 aaKnown RBP13.37□□□□□ -0.27
CD55-211ENST00000635614 SLX4Q8IY92 1834 aa13.37□□□□□ -0.27
CD55-211ENST00000635614 COL11A2P13942 1736 aaPredicted RBP13.37□□□□□ -0.27
CD55-211ENST00000635614 BBOX1O75936 387 aa13.37□□□□□ -0.27
CD55-211ENST00000635614 ANXA1P04083 346 aa13.37□□□□□ -0.27
CD55-211ENST00000635614 TRIM28Q13263 835 aaKnown RBP13.37□□□□□ -0.27
CD55-211ENST00000635614 KRT24Q2M2I5 525 aa13.37□□□□□ -0.27
CD55-211ENST00000635614 NLRP10Q86W26 655 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms