RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 PHKG2P15735 406 aa12.71□□□□□ -0.37
PSPC1-207ENST00000635251 TFCP2Q12800 502 aa12.71□□□□□ -0.37
PSPC1-207ENST00000635251 TOB2Q14106 344 aaPredicted RBP12.71□□□□□ -0.37
PSPC1-207ENST00000635251 KRT32Q14532 448 aa12.71□□□□□ -0.37
PSPC1-207ENST00000635251 TNNI3KQ59H18 835 aa12.71□□□□□ -0.37
PSPC1-207ENST00000635251 ZNF496Q96IT1 587 aaPredicted RBP12.71□□□□□ -0.37
PSPC1-207ENST00000635251 NUP62CLQ9H1M0 184 aa12.71□□□□□ -0.37
PSPC1-207ENST00000635251 FPGT-TNNI3KV9GXZ4 949 aa12.71□□□□□ -0.37
PSPC1-207ENST00000635251 TAF5LO75529 589 aa12.71□□□□□ -0.38
PSPC1-207ENST00000635251 HSP90B1P14625 803 aaKnown RBP12.71□□□□□ -0.38
PSPC1-207ENST00000635251 ATP5JP18859 108 aa12.71□□□□□ -0.38
PSPC1-207ENST00000635251 UBE3BQ7Z3V4 1068 aa12.71□□□□□ -0.38
PSPC1-207ENST00000635251 PROSER2Q86WR7 435 aaPredicted RBP12.71□□□□□ -0.38
PSPC1-207ENST00000635251 PIBF1Q8WXW3 757 aa12.71□□□□□ -0.38
PSPC1-207ENST00000635251 ALDH8A1Q9H2A2 487 aaPredicted RBP12.71□□□□□ -0.38
PSPC1-207ENST00000635251 COPRSQ9NQ92 184 aa12.71□□□□□ -0.38
PSPC1-207ENST00000635251 NOLC1Q14978 699 aaKnown RBP eCLIP12.7□□□□□ -0.38
PSPC1-207ENST00000635251 CAMK4Q16566 473 aa12.7□□□□□ -0.38
PSPC1-207ENST00000635251 MAP3K11Q16584 847 aa12.7□□□□□ -0.38
PSPC1-207ENST00000635251 IFNL2Q8IZJ0 200 aa12.7□□□□□ -0.38
PSPC1-207ENST00000635251 SPATA32Q96LK8 384 aa12.7□□□□□ -0.38
PSPC1-207ENST00000635251 SCAND2PQ9GZW5 306 aaPredicted RBP12.7□□□□□ -0.38
PSPC1-207ENST00000635251 DBNLQ9UJU6 430 aaKnown RBP12.7□□□□□ -0.38
PSPC1-207ENST00000635251 USP16Q9Y5T5 823 aa12.7□□□□□ -0.38
PSPC1-207ENST00000635251 KDM6AO15550 1401 aaPredicted RBP12.7□□□□□ -0.38
PSPC1-207ENST00000635251 ELP1O95163 1332 aa12.69□□□□□ -0.38
PSPC1-207ENST00000635251 DYNC1I1O14576 645 aa12.69□□□□□ -0.38
PSPC1-207ENST00000635251 SNRPA1P09661 255 aaKnown RBP12.69□□□□□ -0.38
PSPC1-207ENST00000635251 NEK1Q96PY6 1258 aa12.69□□□□□ -0.38
PSPC1-207ENST00000635251 TFIP11Q9UBB9 837 aaKnown RBP12.69□□□□□ -0.38
PSPC1-207ENST00000635251 CCDC9Q9Y3X0 531 aaKnown RBP12.69□□□□□ -0.38
PSPC1-207ENST00000635251 NDUFB9Q9Y6M9 179 aa12.69□□□□□ -0.38
PSPC1-207ENST00000635251 C5P01031 1676 aa12.69□□□□□ -0.38
PSPC1-207ENST00000635251 ATP5J2-PTCD1G3V325 749 aa12.69□□□□□ -0.38
PSPC1-207ENST00000635251 PTCD1O75127 700 aaKnown RBP12.69□□□□□ -0.38
PSPC1-207ENST00000635251 LIG1P18858 919 aa12.69□□□□□ -0.38
PSPC1-207ENST00000635251 PTPN12Q05209 780 aaKnown RBP12.69□□□□□ -0.38
PSPC1-207ENST00000635251 TSGA10IPQ3SY00 556 aa12.69□□□□□ -0.38
PSPC1-207ENST00000635251 TNMDQ9H2S6 317 aa12.69□□□□□ -0.38
PSPC1-207ENST00000635251 MRC1P22897 1456 aa12.69□□□□□ -0.38
PSPC1-207ENST00000635251 LMTK3Q96Q04 1460 aa12.69□□□□□ -0.38
PSPC1-207ENST00000635251 ADAMTS7Q9UKP4 1686 aa12.68□□□□□ -0.38
PSPC1-207ENST00000635251 A0A087WZG4 1122 aa12.68□□□□□ -0.38
PSPC1-207ENST00000635251 RFX5P48382 616 aaPredicted RBP12.68□□□□□ -0.38
PSPC1-207ENST00000635251 FGD1P98174 961 aa12.68□□□□□ -0.38
PSPC1-207ENST00000635251 CCDC129Q6ZRS4 1044 aa12.68□□□□□ -0.38
PSPC1-207ENST00000635251 FMNL2Q96PY5 1086 aa12.68□□□□□ -0.38
PSPC1-207ENST00000635251 U3KPZ7 1027 aaPredicted RBP12.68□□□□□ -0.38
PSPC1-207ENST00000635251 RGPD5Q99666 1765 aa12.68□□□□□ -0.38
PSPC1-207ENST00000635251 JCADQ9P266 1359 aa12.68□□□□□ -0.38
PSPC1-207ENST00000635251 ZNF142P52746 1687 aaPredicted RBP12.68□□□□□ -0.38
PSPC1-207ENST00000635251 GOLGA6L6A8MZA4 724 aa12.68□□□□□ -0.38
PSPC1-207ENST00000635251 Q6ZUG5 572 aa12.68□□□□□ -0.38
PSPC1-207ENST00000635251 C17orf53Q8N3J3 647 aaPredicted RBP12.68□□□□□ -0.38
PSPC1-207ENST00000635251 SPC24Q8NBT2 197 aa12.68□□□□□ -0.38
PSPC1-207ENST00000635251 MAP7D2Q96T17 732 aa12.68□□□□□ -0.38
PSPC1-207ENST00000635251 DBNDD2Q9BQY9 259 aa12.68□□□□□ -0.38
PSPC1-207ENST00000635251 H3BQV1 296 aa12.67□□□□□ -0.38
PSPC1-207ENST00000635251 TPM3P06753 285 aa12.67□□□□□ -0.38
PSPC1-207ENST00000635251 MCMDC2Q4G0Z9 681 aa12.67□□□□□ -0.38
PSPC1-207ENST00000635251 IFFO2Q5TF58 517 aa12.67□□□□□ -0.38
PSPC1-207ENST00000635251 USPL1Q5W0Q7 1092 aa12.67□□□□□ -0.38
PSPC1-207ENST00000635251 CKAP2LQ8IYA6 745 aa12.67□□□□□ -0.38
PSPC1-207ENST00000635251 FAM200AQ8TCP9 573 aa12.67□□□□□ -0.38
PSPC1-207ENST00000635251 BICD2Q8TD16 824 aa12.67□□□□□ -0.38
PSPC1-207ENST00000635251 SEC62Q99442 399 aaKnown RBP12.67□□□□□ -0.38
PSPC1-207ENST00000635251 TRPM3Q9HCF6 1732 aaPredicted RBP12.67□□□□□ -0.38
PSPC1-207ENST00000635251 DACT1Q9NYF0 836 aa12.67□□□□□ -0.38
PSPC1-207ENST00000635251 AP5Z1O43299 807 aa12.67□□□□□ -0.38
PSPC1-207ENST00000635251 TYRO3Q06418 890 aa12.67□□□□□ -0.38
PSPC1-207ENST00000635251 DDX46Q7L014 1031 aaKnown RBP12.67□□□□□ -0.38
PSPC1-207ENST00000635251 VSIG10Q8N0Z9 540 aa12.67□□□□□ -0.38
PSPC1-207ENST00000635251 LEO1Q8WVC0 666 aaPredicted RBP12.67□□□□□ -0.38
PSPC1-207ENST00000635251 GTF3C6Q969F1 213 aa12.67□□□□□ -0.38
PSPC1-207ENST00000635251 DCAF5Q96JK2 942 aa12.67□□□□□ -0.38
PSPC1-207ENST00000635251 ZNF609O15014 1411 aa12.66□□□□□ -0.38
PSPC1-207ENST00000635251 JAK2O60674 1132 aa12.66□□□□□ -0.38
PSPC1-207ENST00000635251 CHGBP05060 677 aa12.66□□□□□ -0.38
PSPC1-207ENST00000635251 CABP4P57796 275 aa12.66□□□□□ -0.38
PSPC1-207ENST00000635251 DDX19AQ9NUU7 478 aaKnown RBP12.66□□□□□ -0.38
PSPC1-207ENST00000635251 C1orf167Q5SNV9 1468 aa12.66□□□□□ -0.38
PSPC1-207ENST00000635251 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
PSPC1-207ENST00000635251 MEGF6O75095 1541 aa12.66□□□□□ -0.38
PSPC1-207ENST00000635251 RABL6Q3YEC7 729 aaPredicted RBP12.65□□□□□ -0.38
PSPC1-207ENST00000635251 BRF1Q92994 677 aa12.65□□□□□ -0.38
PSPC1-207ENST00000635251 DDX11Q96FC9 970 aa12.65□□□□□ -0.38
PSPC1-207ENST00000635251 NEUROD6Q96NK8 337 aa12.65□□□□□ -0.38
PSPC1-207ENST00000635251 HAUS7Q99871 368 aa12.65□□□□□ -0.38
PSPC1-207ENST00000635251 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.65□□□□□ -0.38
PSPC1-207ENST00000635251 MRVI1Q9Y6F6 885 aa12.65□□□□□ -0.38
PSPC1-207ENST00000635251 COL15A1P39059 1388 aa12.65□□□□□ -0.38
PSPC1-207ENST00000635251 RFX7Q2KHR2 1363 aa12.65□□□□□ -0.38
PSPC1-207ENST00000635251 CYP21A2P08686 494 aa12.65□□□□□ -0.38
PSPC1-207ENST00000635251 LMBR1LQ6UX01 489 aa12.65□□□□□ -0.38
PSPC1-207ENST00000635251 LRP10Q7Z4F1 713 aa12.65□□□□□ -0.38
PSPC1-207ENST00000635251 LUZP1Q86V48 1076 aa12.65□□□□□ -0.38
PSPC1-207ENST00000635251 PRIMPOLQ96LW4 560 aa12.65□□□□□ -0.38
PSPC1-207ENST00000635251 LRRC2Q9BYS8 371 aa12.65□□□□□ -0.38
PSPC1-207ENST00000635251 HMGN5P82970 282 aaKnown RBP12.64□□□□□ -0.39
PSPC1-207ENST00000635251 ANO6Q4KMQ2 910 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms