RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 RPGRQ92834 1020 aaKnown RBP10.17□□□□□ -0.78
CHD2-213ENST00000628118 ZNF622Q969S3 477 aaKnown RBP eCLIP10.17□□□□□ -0.782e-8■□□□□ 9.8
CHD2-213ENST00000628118 FAM89AQ96GI7 184 aa10.17□□□□□ -0.78
CHD2-213ENST00000628118 PLA2G12BQ9BX93 195 aa10.17□□□□□ -0.78
CHD2-213ENST00000628118 NOB1Q9ULX3 412 aaKnown RBP10.17□□□□□ -0.78
CHD2-213ENST00000628118 HDAC5Q9UQL6 1122 aa10.17□□□□□ -0.78
CHD2-213ENST00000628118 BCS1LQ9Y276 419 aa10.17□□□□□ -0.78
CHD2-213ENST00000628118 LAMB2P55268 1798 aa10.16□□□□□ -0.78
CHD2-213ENST00000628118 CWF19L2Q2TBE0 894 aaKnown RBP10.16□□□□□ -0.78
CHD2-213ENST00000628118 CC2D2BQ6DHV5 1058 aa10.16□□□□□ -0.78
CHD2-213ENST00000628118 SLC4A10Q6U841 1118 aa10.16□□□□□ -0.78
CHD2-213ENST00000628118 TMC4Q7Z404 712 aa10.16□□□□□ -0.78
CHD2-213ENST00000628118 GRM8O00222 908 aa10.15□□□□□ -0.78
CHD2-213ENST00000628118 BBOX1O75936 387 aa10.15□□□□□ -0.78
CHD2-213ENST00000628118 MS4A1P11836 297 aa10.15□□□□□ -0.78
CHD2-213ENST00000628118 HCLS1P14317 486 aaPredicted RBP10.15□□□□□ -0.78
CHD2-213ENST00000628118 YBX3P16989 372 aaKnown RBP eCLIP10.15□□□□□ -0.78
CHD2-213ENST00000628118 CCDC152Q4G0S7 254 aa10.15□□□□□ -0.78
CHD2-213ENST00000628118 ZKSCAN2Q63HK3 967 aa10.15□□□□□ -0.78
CHD2-213ENST00000628118 ATF7IPQ6VMQ6 1270 aa10.15□□□□□ -0.78
CHD2-213ENST00000628118 DDX46Q7L014 1031 aaKnown RBP10.15□□□□□ -0.78
CHD2-213ENST00000628118 PELP1Q8IZL8 1130 aaKnown RBP10.15□□□□□ -0.78
CHD2-213ENST00000628118 TMX4Q9H1E5 349 aaPredicted RBP10.15□□□□□ -0.78
CHD2-213ENST00000628118 C9orf78Q9NZ63 289 aaPredicted RBP10.15□□□□□ -0.78
CHD2-213ENST00000628118 COL11A2P13942 1736 aaPredicted RBP10.15□□□□□ -0.78
CHD2-213ENST00000628118 UTYO14607 1347 aa10.14□□□□□ -0.79
CHD2-213ENST00000628118 ABCC4O15439 1325 aa10.14□□□□□ -0.79
CHD2-213ENST00000628118 DDX60Q8IY21 1712 aaKnown RBP10.14□□□□□ -0.79
CHD2-213ENST00000628118 BCAR3O75815 825 aa10.14□□□□□ -0.79
CHD2-213ENST00000628118 CASP7P55210 303 aa10.14□□□□□ -0.79
CHD2-213ENST00000628118 GRAPQ13588 217 aa10.14□□□□□ -0.79
CHD2-213ENST00000628118 PRPF40BQ6NWY9 871 aaKnown RBP10.14□□□□□ -0.79
CHD2-213ENST00000628118 PIP4P2Q8N4L2 257 aa10.14□□□□□ -0.79
CHD2-213ENST00000628118 GRAPLQ8TC17 118 aaPredicted RBP10.14□□□□□ -0.79
CHD2-213ENST00000628118 RCAN3Q9UKA8 241 aa10.14□□□□□ -0.79
CHD2-213ENST00000628118 TNRC6CQ9HCJ0 1690 aaKnown RBP10.14□□□□□ -0.79
CHD2-213ENST00000628118 RTL9Q8NET4 1388 aa10.14□□□□□ -0.79
CHD2-213ENST00000628118 MYH3P11055 1940 aa10.13□□□□□ -0.79
CHD2-213ENST00000628118 TRIM27P14373 513 aa10.13□□□□□ -0.79
CHD2-213ENST00000628118 CTSWP56202 376 aa10.13□□□□□ -0.79
CHD2-213ENST00000628118 CCDC93Q567U6 631 aa10.13□□□□□ -0.79
CHD2-213ENST00000628118 INTS3Q68E01 1043 aaKnown RBP10.13□□□□□ -0.79
CHD2-213ENST00000628118 UBE3BQ7Z3V4 1068 aa10.13□□□□□ -0.79
CHD2-213ENST00000628118 RTKN2Q8IZC4 609 aa10.13□□□□□ -0.79
CHD2-213ENST00000628118 SYNE4Q8N205 404 aa10.13□□□□□ -0.79
CHD2-213ENST00000628118 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.13□□□□□ -0.79
CHD2-213ENST00000628118 CDC5LQ99459 802 aaKnown RBP10.13□□□□□ -0.79
CHD2-213ENST00000628118 CHD4Q14839 1912 aa10.13□□□□□ -0.79
CHD2-213ENST00000628118 SLX4Q8IY92 1834 aa10.12□□□□□ -0.79
CHD2-213ENST00000628118 LTBP3Q9NS15 1303 aa10.12□□□□□ -0.79
CHD2-213ENST00000628118 CSF1RP07333 972 aa10.12□□□□□ -0.79
CHD2-213ENST00000628118 RTL5Q5HYW3 569 aaPredicted RBP10.12□□□□□ -0.79
CHD2-213ENST00000628118 C3orf67Q6ZVT6 689 aa10.12□□□□□ -0.79
CHD2-213ENST00000628118 C7orf43Q8WVR3 580 aa10.12□□□□□ -0.79
CHD2-213ENST00000628118 FRAT1Q92837 279 aaPredicted RBP10.12□□□□□ -0.79
CHD2-213ENST00000628118 YTHDC1Q96MU7 727 aaKnown RBP10.12□□□□□ -0.79
CHD2-213ENST00000628118 PPEF1O14829 653 aaPredicted RBP10.11□□□□□ -0.79
CHD2-213ENST00000628118 ARHGAP27Q6ZUM4 889 aa10.11□□□□□ -0.79
CHD2-213ENST00000628118 SP8Q8IXZ3 490 aa10.11□□□□□ -0.79
CHD2-213ENST00000628118 FTSJ3Q8IY81 847 aaKnown RBP10.11□□□□□ -0.79
CHD2-213ENST00000628118 DZIP1LQ8IYY4 767 aaKnown RBP10.11□□□□□ -0.79
CHD2-213ENST00000628118 TTLL11Q8NHH1 800 aa10.11□□□□□ -0.79
CHD2-213ENST00000628118 ATP6V0A2Q9Y487 856 aa10.11□□□□□ -0.79
CHD2-213ENST00000628118 C21orf2O43822 256 aa10.1□□□□□ -0.79
CHD2-213ENST00000628118 GNAI3P08754 354 aa10.1□□□□□ -0.79
CHD2-213ENST00000628118 RPS8P62241 208 aaKnown RBP10.1□□□□□ -0.79
CHD2-213ENST00000628118 ANKRD18AQ8IVF6 992 aa10.1□□□□□ -0.79
CHD2-213ENST00000628118 SP7Q8TDD2 431 aaPredicted RBP10.1□□□□□ -0.79
CHD2-213ENST00000628118 PSMD1Q99460 953 aa10.1□□□□□ -0.79
CHD2-213ENST00000628118 USP44Q9H0E7 712 aa10.1□□□□□ -0.79
CHD2-213ENST00000628118 VPS33BQ9H267 617 aa10.1□□□□□ -0.79
CHD2-213ENST00000628118 TAOK3Q9H2K8 898 aa10.1□□□□□ -0.79
CHD2-213ENST00000628118 CHMP4BQ9H444 224 aaKnown RBP10.1□□□□□ -0.79
CHD2-213ENST00000628118 FER1L6Q2WGJ9 1857 aa10.1□□□□□ -0.79
CHD2-213ENST00000628118 ZC3H4Q9UPT8 1303 aaKnown RBP10.09□□□□□ -0.79
CHD2-213ENST00000628118 CACNA1SQ13698 1873 aa10.09□□□□□ -0.79
CHD2-213ENST00000628118 ANKRD18BA2A2Z9 1011 aa10.09□□□□□ -0.79
CHD2-213ENST00000628118 NBPF7P0C2Y1 421 aaPredicted RBP10.09□□□□□ -0.79
CHD2-213ENST00000628118 UBTFL1P0CB47 393 aaPredicted RBP10.09□□□□□ -0.79
CHD2-213ENST00000628118 IGHMBP2P38935 993 aaKnown RBP10.09□□□□□ -0.79
CHD2-213ENST00000628118 FOXO4P98177 505 aa10.09□□□□□ -0.79
CHD2-213ENST00000628118 FKBP4Q02790 459 aaKnown RBP eCLIP10.09□□□□□ -0.79
CHD2-213ENST00000628118 RABL6Q3YEC7 729 aaPredicted RBP10.09□□□□□ -0.79
CHD2-213ENST00000628118 SUPT20HQ8NEM7 779 aa10.09□□□□□ -0.79
CHD2-213ENST00000628118 JARID2Q92833 1246 aaPredicted RBP10.09□□□□□ -0.79
CHD2-213ENST00000628118 WWC3Q9ULE0 1092 aa10.09□□□□□ -0.79
CHD2-213ENST00000628118 LMNB1P20700 586 aa10.08□□□□□ -0.8
CHD2-213ENST00000628118 ITGA6P23229 1130 aa10.08□□□□□ -0.8
CHD2-213ENST00000628118 IFIT5Q13325 482 aaKnown RBP10.08□□□□□ -0.8
CHD2-213ENST00000628118 PDE3AQ14432 1141 aa10.08□□□□□ -0.8
CHD2-213ENST00000628118 CCDC57Q2TAC2 916 aa10.08□□□□□ -0.8
CHD2-213ENST00000628118 CELF1Q92879 486 aaKnown RBP10.08□□□□□ -0.8
CHD2-213ENST00000628118 SUCLG2Q96I99 432 aa10.08□□□□□ -0.8
CHD2-213ENST00000628118 GREM2Q9H772 168 aa10.08□□□□□ -0.8
CHD2-213ENST00000628118 BSDC1Q9NW68 430 aaPredicted RBP10.08□□□□□ -0.8
CHD2-213ENST00000628118 SNED1Q8TER0 1413 aa10.07□□□□□ -0.8
CHD2-213ENST00000628118 NFKBIEO00221 500 aa10.07□□□□□ -0.8
CHD2-213ENST00000628118 PRKAR2AP13861 404 aaKnown RBP10.07□□□□□ -0.8
CHD2-213ENST00000628118 FAM161AQ3B820 660 aa10.07□□□□□ -0.8
CHD2-213ENST00000628118 LMBR1LQ6UX01 489 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms