RNA–Protein interactions for RNA: ENST00000627740.1

APLF-207, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,180 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-207ENST00000627740 PTGER2P43116 358 aa12.36□□□□□ -0.43
APLF-207ENST00000627740 SF3B3Q15393 1217 aaKnown RBP12.36□□□□□ -0.43
APLF-207ENST00000627740 TTLL11Q8NHH1 800 aa12.36□□□□□ -0.43
APLF-207ENST00000627740 PDZRN3Q9UPQ7 1066 aa12.36□□□□□ -0.43
APLF-207ENST00000627740 CHMP3Q9Y3E7 222 aa12.36□□□□□ -0.43
APLF-207ENST00000627740 RTL9Q8NET4 1388 aa12.36□□□□□ -0.43
APLF-207ENST00000627740 SRGAP3O43295 1099 aa12.36□□□□□ -0.43
APLF-207ENST00000627740 ATP8B2P98198 1209 aa12.36□□□□□ -0.43
APLF-207ENST00000627740 PCDHB15Q9Y5E8 787 aa12.36□□□□□ -0.43
APLF-207ENST00000627740 COL11A2P13942 1736 aaPredicted RBP12.35□□□□□ -0.43
APLF-207ENST00000627740 DLEC1Q9Y238 1755 aa12.35□□□□□ -0.43
APLF-207ENST00000627740 SPEF2Q9C093 1822 aa12.35□□□□□ -0.43
APLF-207ENST00000627740 KLRG2A4D1S0 409 aaPredicted RBP12.35□□□□□ -0.43
APLF-207ENST00000627740 CCDC57Q2TAC2 916 aa12.35□□□□□ -0.43
APLF-207ENST00000627740 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
APLF-207ENST00000627740 RPGRQ92834 1020 aaKnown RBP12.35□□□□□ -0.43
APLF-207ENST00000627740 TAF1P21675 1872 aa12.34□□□□□ -0.43
APLF-207ENST00000627740 IFIT5Q13325 482 aaKnown RBP12.34□□□□□ -0.43
APLF-207ENST00000627740 FAM161AQ3B820 660 aa12.34□□□□□ -0.43
APLF-207ENST00000627740 CRY2Q49AN0 593 aa12.34□□□□□ -0.43
APLF-207ENST00000627740 SSH3Q8TE77 659 aa12.34□□□□□ -0.43
APLF-207ENST00000627740 CCDC85AQ96PX6 553 aaPredicted RBP12.34□□□□□ -0.43
APLF-207ENST00000627740 GREM2Q9H772 168 aa12.34□□□□□ -0.43
APLF-207ENST00000627740 PNMA6EA0A0J9YXQ4 647 aa12.33□□□□□ -0.44
APLF-207ENST00000627740 ANKRD18BA2A2Z9 1011 aa12.33□□□□□ -0.44
APLF-207ENST00000627740 ITGA6P23229 1130 aa12.33□□□□□ -0.44
APLF-207ENST00000627740 POLA2Q14181 598 aa12.33□□□□□ -0.44
APLF-207ENST00000627740 DDX46Q7L014 1031 aaKnown RBP12.33□□□□□ -0.44
APLF-207ENST00000627740 SIRT2Q8IXJ6 389 aa12.33□□□□□ -0.44
APLF-207ENST00000627740 RWDD1Q9H446 243 aaPredicted RBP12.33□□□□□ -0.44
APLF-207ENST00000627740 CACNA1SQ13698 1873 aa12.33□□□□□ -0.44
APLF-207ENST00000627740 H0YIN7 160 aa12.33□□□□□ -0.44
APLF-207ENST00000627740 HDAC1Q13547 482 aaPredicted RBP12.33□□□□□ -0.44
APLF-207ENST00000627740 TAF7LQ5H9L4 462 aa12.33□□□□□ -0.44
APLF-207ENST00000627740 RBM17Q96I25 401 aaKnown RBP12.33□□□□□ -0.44
APLF-207ENST00000627740 CDC5LQ99459 802 aaKnown RBP12.33□□□□□ -0.44
APLF-207ENST00000627740 PPP4R2Q9NY27 417 aa12.33□□□□□ -0.44
APLF-207ENST00000627740 NPR1P16066 1061 aa12.32□□□□□ -0.44
APLF-207ENST00000627740 C2CD5Q86YS7 1000 aa12.32□□□□□ -0.44
APLF-207ENST00000627740 CD2APQ9Y5K6 639 aa12.32□□□□□ -0.44
APLF-207ENST00000627740 KIAA1551Q9HCM1 1747 aa12.32□□□□□ -0.44
APLF-207ENST00000627740 SRGNP10124 158 aa12.32□□□□□ -0.44
APLF-207ENST00000627740 HOXA10P31260 410 aaPredicted RBP12.32□□□□□ -0.44
APLF-207ENST00000627740 MASTLQ96GX5 879 aa12.32□□□□□ -0.44
APLF-207ENST00000627740 CCDC136Q96JN2 1154 aa12.32□□□□□ -0.44
APLF-207ENST00000627740 RFX5P48382 616 aaPredicted RBP12.31□□□□□ -0.44
APLF-207ENST00000627740 TGFB2P61812 414 aa12.31□□□□□ -0.44
APLF-207ENST00000627740 COPRSQ9NQ92 184 aa12.31□□□□□ -0.44
APLF-207ENST00000627740 PPP1R1BQ9UD71 204 aaPredicted RBP12.31□□□□□ -0.44
APLF-207ENST00000627740 GTF3C3Q9Y5Q9 886 aa12.31□□□□□ -0.44
APLF-207ENST00000627740 IGHMBP2P38935 993 aaKnown RBP12.3□□□□□ -0.44
APLF-207ENST00000627740 STYK1Q6J9G0 422 aa12.3□□□□□ -0.44
APLF-207ENST00000627740 ANKRD18AQ8IVF6 992 aa12.3□□□□□ -0.44
APLF-207ENST00000627740 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
APLF-207ENST00000627740 SEC31BQ9NQW1 1179 aa12.3□□□□□ -0.44
APLF-207ENST00000627740 LRP5O75197 1615 aa12.3□□□□□ -0.44
APLF-207ENST00000627740 ALDH1B1P30837 517 aa12.3□□□□□ -0.44
APLF-207ENST00000627740 PTPN12Q05209 780 aaKnown RBP12.3□□□□□ -0.44
APLF-207ENST00000627740 GRAPQ13588 217 aa12.3□□□□□ -0.44
APLF-207ENST00000627740 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
APLF-207ENST00000627740 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
APLF-207ENST00000627740 MPHOSPH8Q99549 860 aa12.3□□□□□ -0.44
APLF-207ENST00000627740 FBXO3Q9UK99 471 aa12.3□□□□□ -0.44
APLF-207ENST00000627740 BRCA1P38398 1863 aaKnown RBP12.3□□□□□ -0.44
APLF-207ENST00000627740 HSP90AB4PQ58FF6 505 aa12.29□□□□□ -0.44
APLF-207ENST00000627740 ZNF622Q969S3 477 aaKnown RBP eCLIP12.29□□□□□ -0.44
APLF-207ENST00000627740 SURF6O75683 361 aaKnown RBP12.29□□□□□ -0.44
APLF-207ENST00000627740 CHRNA5P30532 468 aa12.29□□□□□ -0.44
APLF-207ENST00000627740 RPS8P62241 208 aaKnown RBP12.29□□□□□ -0.44
APLF-207ENST00000627740 G3BP1Q13283 466 aaKnown RBP eCLIP12.29□□□□□ -0.44
APLF-207ENST00000627740 KLHDC4Q8TBB5 520 aa12.29□□□□□ -0.44
APLF-207ENST00000627740 CNKSR1Q969H4 720 aa12.29□□□□□ -0.44
APLF-207ENST00000627740 GCC1Q96CN9 775 aa12.29□□□□□ -0.44
APLF-207ENST00000627740 ZNF594Q96JF6 807 aaPredicted RBP12.29□□□□□ -0.44
APLF-207ENST00000627740 PA2G4Q9UQ80 394 aaKnown RBP12.29□□□□□ -0.44
APLF-207ENST00000627740 NOP58Q9Y2X3 529 aaKnown RBP12.29□□□□□ -0.44
APLF-207ENST00000627740 CIAO1O76071 339 aa12.28□□□□□ -0.44
APLF-207ENST00000627740 IGHDP01880 384 aa12.28□□□□□ -0.44
APLF-207ENST00000627740 OS9Q13438 667 aaPredicted RBP12.28□□□□□ -0.44
APLF-207ENST00000627740 LDHAL6AQ6ZMR3 332 aa12.28□□□□□ -0.44
APLF-207ENST00000627740 TMC4Q7Z404 712 aa12.28□□□□□ -0.44
APLF-207ENST00000627740 CELF1Q92879 486 aaKnown RBP12.28□□□□□ -0.44
APLF-207ENST00000627740 SIL1Q9H173 461 aa12.28□□□□□ -0.44
APLF-207ENST00000627740 DCTPP1Q9H773 170 aa12.28□□□□□ -0.44
APLF-207ENST00000627740 CNNM1Q9NRU3 951 aa12.28□□□□□ -0.44
APLF-207ENST00000627740 COL4A1P02462 1669 aa12.28□□□□□ -0.44
APLF-207ENST00000627740 A0A1B0GUL6 1792 aa12.28□□□□□ -0.44
APLF-207ENST00000627740 EYA2O00167 538 aa12.28□□□□□ -0.44
APLF-207ENST00000627740 BBOX1O75936 387 aa12.28□□□□□ -0.44
APLF-207ENST00000627740 DPEP1P16444 411 aa12.28□□□□□ -0.44
APLF-207ENST00000627740 ERC1Q8IUD2 1116 aa12.28□□□□□ -0.44
APLF-207ENST00000627740 BSDC1Q9NW68 430 aaPredicted RBP12.28□□□□□ -0.44
APLF-207ENST00000627740 SLX4Q8IY92 1834 aa12.27□□□□□ -0.44
APLF-207ENST00000627740 LRRC37AA6NMS7 1700 aa12.27□□□□□ -0.45
APLF-207ENST00000627740 A0A0G2JLW4 131 aa12.27□□□□□ -0.45
APLF-207ENST00000627740 IL15P40933 162 aaPredicted RBP12.27□□□□□ -0.45
APLF-207ENST00000627740 B4GALNT3Q6L9W6 998 aa12.27□□□□□ -0.45
APLF-207ENST00000627740 EXOC6BQ9Y2D4 811 aa12.27□□□□□ -0.45
APLF-207ENST00000627740 SRCAPQ6ZRS2 3230 aa12.26□□□□□ -0.45
APLF-207ENST00000627740 RAB11FIP3O75154 756 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms