RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 CAMTA2O94983 1202 aa16.05■□□□□ 0.16
C3orf56-201ENST00000624688 HSPA1LP34931 641 aa16.05■□□□□ 0.16
C3orf56-201ENST00000624688 CCDC57Q2TAC2 916 aa16.05■□□□□ 0.16
C3orf56-201ENST00000624688 PTF1AQ7RTS3 328 aa16.05■□□□□ 0.16
C3orf56-201ENST00000624688 CHMP5Q9NZZ3 219 aa16.05■□□□□ 0.16
C3orf56-201ENST00000624688 TTLL11Q8NHH1 800 aa16.04■□□□□ 0.16
C3orf56-201ENST00000624688 RUFY2Q8WXA3 655 aa16.04■□□□□ 0.16
C3orf56-201ENST00000624688 TRMT112Q9UI30 125 aaKnown RBP16.04■□□□□ 0.16
C3orf56-201ENST00000624688 FBXO3Q9UK99 471 aa16.04■□□□□ 0.16
C3orf56-201ENST00000624688 NHSQ6T4R5 1651 aa16.03■□□□□ 0.16
C3orf56-201ENST00000624688 IRS4O14654 1257 aaPredicted RBP16.03■□□□□ 0.16
C3orf56-201ENST00000624688 CTSWP56202 376 aa16.03■□□□□ 0.16
C3orf56-201ENST00000624688 EDC3Q96F86 508 aaKnown RBP16.03■□□□□ 0.16
C3orf56-201ENST00000624688 CCDC85AQ96PX6 553 aaPredicted RBP16.03■□□□□ 0.16
C3orf56-201ENST00000624688 SNRKQ9NRH2 765 aa16.03■□□□□ 0.16
C3orf56-201ENST00000624688 BCORQ6W2J9 1755 aa16.03■□□□□ 0.16
C3orf56-201ENST00000624688 HIP1O00291 1037 aa16.02■□□□□ 0.16
C3orf56-201ENST00000624688 ST18O60284 1047 aa16.02■□□□□ 0.16
C3orf56-201ENST00000624688 TIMM10P62072 90 aa16.02■□□□□ 0.16
C3orf56-201ENST00000624688 NMIQ13287 307 aaPredicted RBP16.02■□□□□ 0.16
C3orf56-201ENST00000624688 IFIT5Q13325 482 aaKnown RBP16.02■□□□□ 0.16
C3orf56-201ENST00000624688 LINC00116Q8NCU8 138 aa16.02■□□□□ 0.16
C3orf56-201ENST00000624688 FAM227BQ96M60 508 aa16.02■□□□□ 0.16
C3orf56-201ENST00000624688 HAUS7Q99871 368 aa16.02■□□□□ 0.16
C3orf56-201ENST00000624688 BTAF1O14981 1849 aa16.02■□□□□ 0.16
C3orf56-201ENST00000624688 PTH1RQ03431 593 aa16.02■□□□□ 0.15
C3orf56-201ENST00000624688 SUSD4Q5VX71 490 aa16.02■□□□□ 0.15
C3orf56-201ENST00000624688 FSD1Q9BTV5 496 aa16.02■□□□□ 0.15
C3orf56-201ENST00000624688 GREM2Q9H772 168 aa16.02■□□□□ 0.15
C3orf56-201ENST00000624688 PDE8AO60658 829 aa16.01■□□□□ 0.15
C3orf56-201ENST00000624688 KIAA1211Q6ZU35 1233 aa16.01■□□□□ 0.15
C3orf56-201ENST00000624688 GJD4Q96KN9 370 aaPredicted RBP16.01■□□□□ 0.15
C3orf56-201ENST00000624688 NEUROD6Q96NK8 337 aa16.01■□□□□ 0.15
C3orf56-201ENST00000624688 NDUFB9Q9Y6M9 179 aa16.01■□□□□ 0.15
C3orf56-201ENST00000624688 RIC1Q4ADV7 1423 aa16■□□□□ 0.15
C3orf56-201ENST00000624688 AFF2P51816 1311 aa16■□□□□ 0.15
C3orf56-201ENST00000624688 A0A0D9SFI3 127 aa16■□□□□ 0.15
C3orf56-201ENST00000624688 A0A1B0GUL7 405 aa16■□□□□ 0.15
C3orf56-201ENST00000624688 ITGA6P23229 1130 aa16■□□□□ 0.15
C3orf56-201ENST00000624688 NEK4P51957 841 aa16■□□□□ 0.15
C3orf56-201ENST00000624688 MEX3CQ5U5Q3 659 aaKnown RBP16■□□□□ 0.15
C3orf56-201ENST00000624688 FOXD4L1Q9NU39 408 aa16■□□□□ 0.15
C3orf56-201ENST00000624688 CEP126Q9P2H0 1117 aa16■□□□□ 0.15
C3orf56-201ENST00000624688 ATRNO75882 1429 aa16■□□□□ 0.15
C3orf56-201ENST00000624688 KCNQ4P56696 695 aa15.99■□□□□ 0.15
C3orf56-201ENST00000624688 CIZ1Q9ULV3 898 aaPredicted RBP15.99■□□□□ 0.15
C3orf56-201ENST00000624688 RIPOR2Q9Y4F9 1068 aa15.99■□□□□ 0.15
C3orf56-201ENST00000624688 SNX14Q9Y5W7 946 aa15.99■□□□□ 0.15
C3orf56-201ENST00000624688 DDX60Q8IY21 1712 aaKnown RBP15.99■□□□□ 0.15
C3orf56-201ENST00000624688 RFX7Q2KHR2 1363 aa15.99■□□□□ 0.15
C3orf56-201ENST00000624688 MED23Q9ULK4 1368 aa15.99■□□□□ 0.15
C3orf56-201ENST00000624688 LRP5O75197 1615 aa15.99■□□□□ 0.15
C3orf56-201ENST00000624688 ADRA2BP18089 450 aa15.99■□□□□ 0.15
C3orf56-201ENST00000624688 FAM182BQ5T319 152 aa15.99■□□□□ 0.15
C3orf56-201ENST00000624688 RASEFQ8IZ41 740 aa15.99■□□□□ 0.15
C3orf56-201ENST00000624688 AK7Q96M32 723 aa15.99■□□□□ 0.15
C3orf56-201ENST00000624688 CCDC171Q6TFL3 1326 aa15.98■□□□□ 0.15
C3orf56-201ENST00000624688 CNTNAP4Q9C0A0 1308 aa15.98■□□□□ 0.15
C3orf56-201ENST00000624688 ANKRD18BA2A2Z9 1011 aa15.98■□□□□ 0.15
C3orf56-201ENST00000624688 HSP90AA1P07900 732 aaKnown RBP15.98■□□□□ 0.15
C3orf56-201ENST00000624688 TAF7LQ5H9L4 462 aa15.98■□□□□ 0.15
C3orf56-201ENST00000624688 KCNB2Q92953 911 aa15.98■□□□□ 0.15
C3orf56-201ENST00000624688 DNAJC2Q99543 621 aaKnown RBP15.98■□□□□ 0.15
C3orf56-201ENST00000624688 SBF2Q86WG5 1849 aa15.98■□□□□ 0.15
C3orf56-201ENST00000624688 LAMB2P55268 1798 aa15.98■□□□□ 0.15
C3orf56-201ENST00000624688 SH3TC1Q8TE82 1336 aa15.97■□□□□ 0.15
C3orf56-201ENST00000624688 ONECUT3O60422 494 aaPredicted RBP15.97■□□□□ 0.15
C3orf56-201ENST00000624688 PARP10Q53GL7 1025 aa15.97■□□□□ 0.15
C3orf56-201ENST00000624688 UTP14AQ9BVJ6 771 aaKnown RBP15.97■□□□□ 0.15
C3orf56-201ENST00000624688 NTSR2O95665 410 aa15.97■□□□□ 0.15
C3orf56-201ENST00000624688 ADORA1P30542 326 aa15.97■□□□□ 0.15
C3orf56-201ENST00000624688 NECTIN1Q15223 517 aa15.97■□□□□ 0.15
C3orf56-201ENST00000624688 MAP4K1Q92918 833 aa15.97■□□□□ 0.15
C3orf56-201ENST00000624688 AKAP2Q9Y2D5 859 aa15.97■□□□□ 0.15
C3orf56-201ENST00000624688 LY75O60449 1722 aa15.96■□□□□ 0.15
C3orf56-201ENST00000624688 CHGBP05060 677 aa15.96■□□□□ 0.15
C3orf56-201ENST00000624688 HCLS1P14317 486 aaPredicted RBP15.96■□□□□ 0.15
C3orf56-201ENST00000624688 LDHAL6AQ6ZMR3 332 aa15.96■□□□□ 0.15
C3orf56-201ENST00000624688 DDX46Q7L014 1031 aaKnown RBP15.96■□□□□ 0.15
C3orf56-201ENST00000624688 ZNF589Q86UQ0 364 aaPredicted RBP15.96■□□□□ 0.15
C3orf56-201ENST00000624688 KBTBD3Q8NAB2 608 aa15.96■□□□□ 0.15
C3orf56-201ENST00000624688 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.96■□□□□ 0.15
C3orf56-201ENST00000624688 UPF3BQ9BZI7 483 aaKnown RBP15.96■□□□□ 0.15
C3orf56-201ENST00000624688 NIP7Q9Y221 180 aaKnown RBP eCLIP15.96■□□□□ 0.15
C3orf56-201ENST00000624688 SPEF2Q9C093 1822 aa15.96■□□□□ 0.14
C3orf56-201ENST00000624688 SCN7AQ01118 1682 aa15.96■□□□□ 0.14
C3orf56-201ENST00000624688 FAM177BA6PVY3 158 aa15.95■□□□□ 0.14
C3orf56-201ENST00000624688 MCM2P49736 904 aa15.95■□□□□ 0.14
C3orf56-201ENST00000624688 RAB3GAP1Q15042 981 aa15.95■□□□□ 0.14
C3orf56-201ENST00000624688 VGLL2Q8N8G2 317 aa15.95■□□□□ 0.14
C3orf56-201ENST00000624688 XAGE2Q96GT9 111 aa15.95■□□□□ 0.14
C3orf56-201ENST00000624688 PAG1Q9NWQ8 432 aa15.95■□□□□ 0.14
C3orf56-201ENST00000624688 GOLIM4O00461 696 aa15.94■□□□□ 0.14
C3orf56-201ENST00000624688 METTL24Q5JXM2 366 aa15.94■□□□□ 0.14
C3orf56-201ENST00000624688 RC3H1Q5TC82 1133 aaKnown RBP15.94■□□□□ 0.14
C3orf56-201ENST00000624688 PRPF40BQ6NWY9 871 aaKnown RBP15.94■□□□□ 0.14
C3orf56-201ENST00000624688 CLEC4GQ6UXB4 293 aa15.94■□□□□ 0.14
C3orf56-201ENST00000624688 IL27Q8NEV9 243 aa15.94■□□□□ 0.14
C3orf56-201ENST00000624688 TMX3Q96JJ7 454 aa15.94■□□□□ 0.14
C3orf56-201ENST00000624688 TTC14Q96N46 770 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms