RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 DNA2P51530 1060 aa18.68■□□□□ 0.58
GABRB3-215ENST00000622697 RRAGDQ9NQL2 400 aaPredicted RBP18.68■□□□□ 0.58
GABRB3-215ENST00000622697 POLR3GO15318 223 aaPredicted RBP18.68■□□□□ 0.58
GABRB3-215ENST00000622697 CATIPQ7Z7H3 387 aa18.68■□□□□ 0.58
GABRB3-215ENST00000622697 RBSNQ9H1K0 784 aa18.68■□□□□ 0.58
GABRB3-215ENST00000622697 SYT1P21579 422 aa18.68■□□□□ 0.58
GABRB3-215ENST00000622697 CEP135Q66GS9 1140 aa18.68■□□□□ 0.58
GABRB3-215ENST00000622697 RNF41Q9H4P4 317 aaPredicted RBP18.68■□□□□ 0.58
GABRB3-215ENST00000622697 KIF5CO60282 957 aa18.67■□□□□ 0.58
GABRB3-215ENST00000622697 ZPR1O75312 459 aa18.67■□□□□ 0.58
GABRB3-215ENST00000622697 LUC7LQ9NQ29 371 aaKnown RBP18.67■□□□□ 0.58
GABRB3-215ENST00000622697 SNW1Q13573 536 aaKnown RBP18.67■□□□□ 0.58
GABRB3-215ENST00000622697 SEC63Q9UGP8 760 aaKnown RBP18.67■□□□□ 0.58
GABRB3-215ENST00000622697 TTF1Q15361 905 aaPredicted RBP18.67■□□□□ 0.58
GABRB3-215ENST00000622697 ZSWIM4Q9H7M6 989 aa18.67■□□□□ 0.58
GABRB3-215ENST00000622697 EXOC5O00471 708 aa18.67■□□□□ 0.58
GABRB3-215ENST00000622697 PAG1Q9NWQ8 432 aa18.67■□□□□ 0.58
GABRB3-215ENST00000622697 TTC41PQ6P2S7 1318 aa18.67■□□□□ 0.58
GABRB3-215ENST00000622697 ALG1Q9BT22 464 aa18.67■□□□□ 0.58
GABRB3-215ENST00000622697 ZNF76P36508 570 aa18.66■□□□□ 0.58
GABRB3-215ENST00000622697 SYKP43405 635 aa18.66■□□□□ 0.58
GABRB3-215ENST00000622697 PPP1R1BQ9UD71 204 aaPredicted RBP18.66■□□□□ 0.58
GABRB3-215ENST00000622697 GSDMDP57764 484 aa18.66■□□□□ 0.58
GABRB3-215ENST00000622697 AOPEPQ8N6M6 819 aa18.66■□□□□ 0.58
GABRB3-215ENST00000622697 CCDC102BQ68D86 513 aa18.66■□□□□ 0.58
GABRB3-215ENST00000622697 RUFY3Q7L099 469 aa18.66■□□□□ 0.58
GABRB3-215ENST00000622697 ZNF444Q8N0Y2 327 aaPredicted RBP18.66■□□□□ 0.58
GABRB3-215ENST00000622697 MAGI2Q86UL8 1455 aa18.66■□□□□ 0.58
GABRB3-215ENST00000622697 TYRO3Q06418 890 aa18.66■□□□□ 0.58
GABRB3-215ENST00000622697 VAT1LQ9HCJ6 419 aa18.66■□□□□ 0.58
GABRB3-215ENST00000622697 CCDC194A0A1B0GVG4 234 aa18.65■□□□□ 0.58
GABRB3-215ENST00000622697 ATP2B3Q16720 1220 aa18.65■□□□□ 0.58
GABRB3-215ENST00000622697 TMEM132AQ24JP5 1023 aa18.65■□□□□ 0.58
GABRB3-215ENST00000622697 FBXO3Q9UK99 471 aa18.65■□□□□ 0.58
GABRB3-215ENST00000622697 GCC2Q8IWJ2 1684 aa18.65■□□□□ 0.58
GABRB3-215ENST00000622697 CHL1O00533 1208 aa18.65■□□□□ 0.58
GABRB3-215ENST00000622697 NEMFO60524 1076 aa18.65■□□□□ 0.58
GABRB3-215ENST00000622697 SLC9C2Q5TAH2 1124 aa18.65■□□□□ 0.58
GABRB3-215ENST00000622697 CCDC129Q6ZRS4 1044 aa18.65■□□□□ 0.58
GABRB3-215ENST00000622697 SKILP12757 684 aa18.65■□□□□ 0.58
GABRB3-215ENST00000622697 MAPK8IP2Q13387 824 aaPredicted RBP18.65■□□□□ 0.58
GABRB3-215ENST00000622697 FAM173BQ6P4H8 233 aa18.65■□□□□ 0.58
GABRB3-215ENST00000622697 CCDC148Q8NFR7 591 aa18.65■□□□□ 0.58
GABRB3-215ENST00000622697 ZCRB1Q8TBF4 217 aaKnown RBP18.65■□□□□ 0.58
GABRB3-215ENST00000622697 LGR6Q9HBX8 967 aa18.64■□□□□ 0.58
GABRB3-215ENST00000622697 SBNO2Q9Y2G9 1366 aa18.64■□□□□ 0.57
GABRB3-215ENST00000622697 KCNA6P17658 529 aa18.64■□□□□ 0.57
GABRB3-215ENST00000622697 DYNC1I1O14576 645 aa18.64■□□□□ 0.57
GABRB3-215ENST00000622697 RXRAP19793 462 aa18.64■□□□□ 0.57
GABRB3-215ENST00000622697 GOLGA6L10A6NI86 522 aa18.64■□□□□ 0.57
GABRB3-215ENST00000622697 ZBTB43O43298 467 aa18.64■□□□□ 0.57
GABRB3-215ENST00000622697 AFMP43652 599 aa18.64■□□□□ 0.57
GABRB3-215ENST00000622697 ZNF397Q8NF99 534 aaPredicted RBP18.64■□□□□ 0.57
GABRB3-215ENST00000622697 CGNQ9P2M7 1197 aaKnown RBP18.64■□□□□ 0.57
GABRB3-215ENST00000622697 MYO6Q9UM54 1294 aa18.64■□□□□ 0.57
GABRB3-215ENST00000622697 PBRM1Q86U86 1689 aa18.64■□□□□ 0.57
GABRB3-215ENST00000622697 LUZP1Q86V48 1076 aa18.64■□□□□ 0.57
GABRB3-215ENST00000622697 DHX37Q8IY37 1157 aaKnown RBP18.64■□□□□ 0.57
GABRB3-215ENST00000622697 MRPS27Q92552 414 aaKnown RBP18.64■□□□□ 0.57
GABRB3-215ENST00000622697 CFAP65Q6ZU64 1925 aaKnown RBP18.63■□□□□ 0.57
GABRB3-215ENST00000622697 INTS4Q96HW7 963 aaKnown RBP18.63■□□□□ 0.57
GABRB3-215ENST00000622697 USP19O94966 1318 aa18.63■□□□□ 0.57
GABRB3-215ENST00000622697 PRC1O43663 620 aa18.63■□□□□ 0.57
GABRB3-215ENST00000622697 HELBQ8NG08 1087 aaPredicted RBP18.63■□□□□ 0.57
GABRB3-215ENST00000622697 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.63■□□□□ 0.57
GABRB3-215ENST00000622697 V9GYY5 206 aaPredicted RBP18.63■□□□□ 0.57
GABRB3-215ENST00000622697 GCP02774 474 aa18.63■□□□□ 0.57
GABRB3-215ENST00000622697 PRKCSHP14314 528 aaPredicted RBP18.63■□□□□ 0.57
GABRB3-215ENST00000622697 TSPY2A6NKD2 308 aa18.62■□□□□ 0.57
GABRB3-215ENST00000622697 PTGS1P23219 599 aa18.62■□□□□ 0.57
GABRB3-215ENST00000622697 IL15P40933 162 aaPredicted RBP18.62■□□□□ 0.57
GABRB3-215ENST00000622697 UBASH3AP57075 661 aa18.62■□□□□ 0.57
GABRB3-215ENST00000622697 SPA17Q15506 151 aa18.62■□□□□ 0.57
GABRB3-215ENST00000622697 NDUFB9Q9Y6M9 179 aa18.62■□□□□ 0.57
GABRB3-215ENST00000622697 ABCA5Q8WWZ7 1642 aa18.62■□□□□ 0.57
GABRB3-215ENST00000622697 RNMTO43148 476 aaKnown RBP18.62■□□□□ 0.57
GABRB3-215ENST00000622697 NBPF7P0C2Y1 421 aaPredicted RBP18.62■□□□□ 0.57
GABRB3-215ENST00000622697 TAF3Q5VWG9 929 aa18.62■□□□□ 0.57
GABRB3-215ENST00000622697 WTAPQ15007 396 aa18.62■□□□□ 0.57
GABRB3-215ENST00000622697 PRIMPOLQ96LW4 560 aa18.61■□□□□ 0.57
GABRB3-215ENST00000622697 TRERF1Q96PN7 1200 aa18.61■□□□□ 0.57
GABRB3-215ENST00000622697 UBA5Q9GZZ9 404 aa18.61■□□□□ 0.57
GABRB3-215ENST00000622697 ZHX1Q9UKY1 873 aaPredicted RBP18.61■□□□□ 0.57
GABRB3-215ENST00000622697 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.61■□□□□ 0.57
GABRB3-215ENST00000622697 GNG11P61952 73 aa18.61■□□□□ 0.57
GABRB3-215ENST00000622697 FAM227BQ96M60 508 aa18.61■□□□□ 0.57
GABRB3-215ENST00000622697 CCDC171Q6TFL3 1326 aa18.61■□□□□ 0.57
GABRB3-215ENST00000622697 PTPDC1A2A3K4 754 aa18.61■□□□□ 0.57
GABRB3-215ENST00000622697 SNX14Q9Y5W7 946 aa18.61■□□□□ 0.57
GABRB3-215ENST00000622697 SLC4A4Q9Y6R1 1079 aa18.61■□□□□ 0.57
GABRB3-215ENST00000622697 LMOD1P29536 600 aaPredicted RBP18.61■□□□□ 0.57
GABRB3-215ENST00000622697 FKBP15Q5T1M5 1219 aa18.61■□□□□ 0.57
GABRB3-215ENST00000622697 CACNA2D4Q7Z3S7 1137 aa18.61■□□□□ 0.57
GABRB3-215ENST00000622697 ABCC2Q92887 1545 aa18.61■□□□□ 0.57
GABRB3-215ENST00000622697 GSPT1P15170 499 aaKnown RBP18.61■□□□□ 0.57
GABRB3-215ENST00000622697 TEX13AQ9BXU3 409 aaPredicted RBP18.61■□□□□ 0.57
GABRB3-215ENST00000622697 TIMM10P62072 90 aa18.6■□□□□ 0.57
GABRB3-215ENST00000622697 ZBTB9Q96C00 473 aa18.6■□□□□ 0.57
GABRB3-215ENST00000622697 CCDC96Q2M329 555 aa18.6■□□□□ 0.57
GABRB3-215ENST00000622697 ACSBG1Q96GR2 724 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms