RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 ATG3Q9NT62 314 aa27.37■■□□□ 1.97
NKX2-3-202ENST00000622383 TCIRG1Q13488 830 aa27.37■■□□□ 1.97
NKX2-3-202ENST00000622383 DNAJC2Q99543 621 aaKnown RBP27.37■■□□□ 1.97
NKX2-3-202ENST00000622383 TAF6LQ9Y6J9 622 aa27.37■■□□□ 1.97
NKX2-3-202ENST00000622383 IL15P40933 162 aaPredicted RBP27.36■■□□□ 1.97
NKX2-3-202ENST00000622383 FAM43AQ8N2R8 423 aa27.36■■□□□ 1.97
NKX2-3-202ENST00000622383 ZSCAN31Q96LW9 406 aaPredicted RBP27.36■■□□□ 1.97
NKX2-3-202ENST00000622383 NSFL1CQ9UNZ2 370 aaKnown RBP27.36■■□□□ 1.97
NKX2-3-202ENST00000622383 DISP2A7MBM2 1401 aa27.36■■□□□ 1.97
NKX2-3-202ENST00000622383 TEX13AQ9BXU3 409 aaPredicted RBP27.35■■□□□ 1.97
NKX2-3-202ENST00000622383 EYA2O00167 538 aa27.35■■□□□ 1.97
NKX2-3-202ENST00000622383 CHGBP05060 677 aa27.35■■□□□ 1.97
NKX2-3-202ENST00000622383 LRRC24Q50LG9 513 aa27.35■■□□□ 1.97
NKX2-3-202ENST00000622383 ZNF594Q96JF6 807 aaPredicted RBP27.35■■□□□ 1.97
NKX2-3-202ENST00000622383 SH2B1Q9NRF2 756 aaPredicted RBP27.35■■□□□ 1.97
NKX2-3-202ENST00000622383 PSMA5P28066 241 aa27.34■■□□□ 1.97
NKX2-3-202ENST00000622383 ST3GAL1Q11201 340 aa27.34■■□□□ 1.97
NKX2-3-202ENST00000622383 TRIM28Q13263 835 aaKnown RBP27.34■■□□□ 1.97
NKX2-3-202ENST00000622383 RNF20Q5VTR2 975 aa27.34■■□□□ 1.97
NKX2-3-202ENST00000622383 USPL1Q5W0Q7 1092 aa27.34■■□□□ 1.97
NKX2-3-202ENST00000622383 RBM27Q9P2N5 1060 aaKnown RBP27.34■■□□□ 1.97
NKX2-3-202ENST00000622383 ZNF609O15014 1411 aa27.34■■□□□ 1.97
NKX2-3-202ENST00000622383 TSGA10IPQ3SY00 556 aa27.33■■□□□ 1.97
NKX2-3-202ENST00000622383 CCDC83Q8IWF9 413 aa27.33■■□□□ 1.97
NKX2-3-202ENST00000622383 SMC3Q9UQE7 1217 aa27.33■■□□□ 1.97
NKX2-3-202ENST00000622383 SYT1P21579 422 aa27.33■■□□□ 1.97
NKX2-3-202ENST00000622383 TIMM10P62072 90 aa27.33■■□□□ 1.97
NKX2-3-202ENST00000622383 ME3Q16798 604 aa27.33■■□□□ 1.97
NKX2-3-202ENST00000622383 DDX46Q7L014 1031 aaKnown RBP27.33■■□□□ 1.97
NKX2-3-202ENST00000622383 NEUROD6Q96NK8 337 aa27.33■■□□□ 1.97
NKX2-3-202ENST00000622383 ZNF330Q9Y3S2 320 aaPredicted RBP27.33■■□□□ 1.97
NKX2-3-202ENST00000622383 CIAO1O76071 339 aa27.32■■□□□ 1.96
NKX2-3-202ENST00000622383 TMEM63CQ9P1W3 806 aa27.32■■□□□ 1.96
NKX2-3-202ENST00000622383 KBTBD3Q8NAB2 608 aa27.31■■□□□ 1.96
NKX2-3-202ENST00000622383 HMG20BQ9P0W2 317 aa27.31■■□□□ 1.96
NKX2-3-202ENST00000622383 TPCN1Q9ULQ1 816 aa27.31■■□□□ 1.96
NKX2-3-202ENST00000622383 CCDC9Q9Y3X0 531 aaKnown RBP27.31■■□□□ 1.96
NKX2-3-202ENST00000622383 STX6O43752 255 aa27.31■■□□□ 1.96
NKX2-3-202ENST00000622383 MBD3O95983 291 aa27.31■■□□□ 1.96
NKX2-3-202ENST00000622383 ZSCAN22P10073 491 aaPredicted RBP27.31■■□□□ 1.96
NKX2-3-202ENST00000622383 SEC62Q99442 399 aaKnown RBP27.31■■□□□ 1.96
NKX2-3-202ENST00000622383 PUS3Q9BZE2 481 aaKnown RBP27.31■■□□□ 1.96
NKX2-3-202ENST00000622383 STARD3NLO95772 234 aa27.3■■□□□ 1.96
NKX2-3-202ENST00000622383 FOXD4L6Q3SYB3 417 aaPredicted RBP27.3■■□□□ 1.96
NKX2-3-202ENST00000622383 FOXD4L3Q6VB84 417 aaPredicted RBP27.3■■□□□ 1.96
NKX2-3-202ENST00000622383 BLOC1S2Q6QNY1 142 aa27.29■■□□□ 1.96
NKX2-3-202ENST00000622383 ALDH8A1Q9H2A2 487 aaPredicted RBP27.29■■□□□ 1.96
NKX2-3-202ENST00000622383 RPS6KB1P23443 525 aa27.29■■□□□ 1.96
NKX2-3-202ENST00000622383 MCMDC2Q4G0Z9 681 aa27.29■■□□□ 1.96
NKX2-3-202ENST00000622383 KIF6Q6ZMV9 814 aa27.29■■□□□ 1.96
NKX2-3-202ENST00000622383 CCDC129Q6ZRS4 1044 aa27.29■■□□□ 1.96
NKX2-3-202ENST00000622383 GJB2P29033 226 aa27.28■■□□□ 1.96
NKX2-3-202ENST00000622383 SLC4A9Q96Q91 983 aa27.28■■□□□ 1.96
NKX2-3-202ENST00000622383 BCL9O00512 1426 aa27.28■■□□□ 1.96
NKX2-3-202ENST00000622383 COL14A1Q05707 1796 aaKnown RBP27.28■■□□□ 1.96
NKX2-3-202ENST00000622383 PALLDQ8WX93 1383 aa27.28■■□□□ 1.96
NKX2-3-202ENST00000622383 PCCAP05165 728 aaPredicted RBP27.28■■□□□ 1.96
NKX2-3-202ENST00000622383 NECAB1Q8N987 351 aa27.28■■□□□ 1.96
NKX2-3-202ENST00000622383 FAM89AQ96GI7 184 aa27.27■■□□□ 1.96
NKX2-3-202ENST00000622383 GDPD2Q9HCC8 539 aa27.27■■□□□ 1.96
NKX2-3-202ENST00000622383 PAG1Q9NWQ8 432 aa27.27■■□□□ 1.96
NKX2-3-202ENST00000622383 MAP3K15Q6ZN16 1313 aa27.26■■□□□ 1.96
NKX2-3-202ENST00000622383 SH3TC1Q8TE82 1336 aa27.26■■□□□ 1.96
NKX2-3-202ENST00000622383 A0A1B0GUL7 405 aa27.26■■□□□ 1.95
NKX2-3-202ENST00000622383 GOLIM4O00461 696 aa27.26■■□□□ 1.95
NKX2-3-202ENST00000622383 DTNBO60941 627 aa27.26■■□□□ 1.95
NKX2-3-202ENST00000622383 USP48Q86UV5 1035 aa27.26■■□□□ 1.95
NKX2-3-202ENST00000622383 TCEANC2Q96MN5 208 aa27.26■■□□□ 1.95
NKX2-3-202ENST00000622383 PLA2G12BQ9BX93 195 aa27.26■■□□□ 1.95
NKX2-3-202ENST00000622383 TOB2Q14106 344 aaPredicted RBP27.26■■□□□ 1.95
NKX2-3-202ENST00000622383 CCDC57Q2TAC2 916 aa27.26■■□□□ 1.95
NKX2-3-202ENST00000622383 ZBTB38Q8NAP3 1195 aaPredicted RBP27.26■■□□□ 1.95
NKX2-3-202ENST00000622383 TMEM87AQ8NBN3 555 aa27.26■■□□□ 1.95
NKX2-3-202ENST00000622383 F13A1P00488 732 aa27.25■■□□□ 1.95
NKX2-3-202ENST00000622383 NASPP49321 788 aaPredicted RBP27.25■■□□□ 1.95
NKX2-3-202ENST00000622383 GIGYF2Q6Y7W6 1299 aaKnown RBP27.25■■□□□ 1.95
NKX2-3-202ENST00000622383 U3KPZ7 1027 aaPredicted RBP27.25■■□□□ 1.95
NKX2-3-202ENST00000622383 ITGB4P16144 1822 aa27.25■■□□□ 1.95
NKX2-3-202ENST00000622383 GADD45BO75293 160 aaPredicted RBP27.24■■□□□ 1.95
NKX2-3-202ENST00000622383 CSF1RP07333 972 aa27.24■■□□□ 1.95
NKX2-3-202ENST00000622383 PRIM1P49642 420 aaKnown RBP27.24■■□□□ 1.95
NKX2-3-202ENST00000622383 ANKRD1Q15327 319 aa27.24■■□□□ 1.95
NKX2-3-202ENST00000622383 CYP19A1P11511 503 aaPredicted RBP27.24■■□□□ 1.95
NKX2-3-202ENST00000622383 KRT32Q14532 448 aa27.24■■□□□ 1.95
NKX2-3-202ENST00000622383 HLFQ16534 295 aa27.24■■□□□ 1.95
NKX2-3-202ENST00000622383 TICAM2Q86XR7 235 aa27.24■■□□□ 1.95
NKX2-3-202ENST00000622383 RRAGDQ9NQL2 400 aaPredicted RBP27.24■■□□□ 1.95
NKX2-3-202ENST00000622383 MTMR6Q9Y217 621 aa27.24■■□□□ 1.95
NKX2-3-202ENST00000622383 SLFNL1Q499Z3 407 aa27.23■■□□□ 1.95
NKX2-3-202ENST00000622383 CEP126Q9P2H0 1117 aa27.23■■□□□ 1.95
NKX2-3-202ENST00000622383 FBXO3Q9UK99 471 aa27.23■■□□□ 1.95
NKX2-3-202ENST00000622383 CNPY2Q9Y2B0 182 aa27.22■■□□□ 1.95
NKX2-3-202ENST00000622383 LRP6O75581 1613 aa27.22■■□□□ 1.95
NKX2-3-202ENST00000622383 COL16A1Q07092 1604 aaPredicted RBP27.22■■□□□ 1.95
NKX2-3-202ENST00000622383 CYP21A2P08686 494 aa27.22■■□□□ 1.95
NKX2-3-202ENST00000622383 IFIT1P09914 478 aaKnown RBP27.22■■□□□ 1.95
NKX2-3-202ENST00000622383 RBSNQ9H1K0 784 aa27.22■■□□□ 1.95
NKX2-3-202ENST00000622383 HELLSQ9NRZ9 838 aa27.22■■□□□ 1.95
NKX2-3-202ENST00000622383 SYCE3A1L190 88 aa27.21■■□□□ 1.95
NKX2-3-202ENST00000622383 EXOC5O00471 708 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms