RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 LAMC2Q13753 1193 aa7.94□□□□□ -1.14
CPNE3-213ENST00000622183 UBAP2LQ14157 1087 aaKnown RBP7.94□□□□□ -1.14
CPNE3-213ENST00000622183 CRELD1Q96HD1 420 aa7.94□□□□□ -1.14
CPNE3-213ENST00000622183 DACH1Q9UI36 760 aa7.94□□□□□ -1.14
CPNE3-213ENST00000622183 SFSWAPQ12872 951 aaKnown RBP7.93□□□□□ -1.14
CPNE3-213ENST00000622183 TRIM22Q8IYM9 498 aa7.93□□□□□ -1.14
CPNE3-213ENST00000622183 TMEM87AQ8NBN3 555 aa7.93□□□□□ -1.14
CPNE3-213ENST00000622183 EPS8L3Q8TE67 593 aaKnown RBP7.93□□□□□ -1.14
CPNE3-213ENST00000622183 PMEPA1Q969W9 287 aa7.93□□□□□ -1.14
CPNE3-213ENST00000622183 KIFC2Q96AC6 838 aa7.93□□□□□ -1.14
CPNE3-213ENST00000622183 NUCKS1Q9H1E3 243 aaKnown RBP7.93□□□□□ -1.14
CPNE3-213ENST00000622183 SENP2Q9HC62 589 aa7.93□□□□□ -1.14
CPNE3-213ENST00000622183 METTL5Q9NRN9 209 aaKnown RBP7.93□□□□□ -1.14
CPNE3-213ENST00000622183 NLRP2Q9NX02 1062 aa7.93□□□□□ -1.14
CPNE3-213ENST00000622183 CNTN3Q9P232 1028 aa7.93□□□□□ -1.14
CPNE3-213ENST00000622183 EREGO14944 169 aa7.92□□□□□ -1.14
CPNE3-213ENST00000622183 EIF4BP23588 611 aaKnown RBP7.92□□□□□ -1.14
CPNE3-213ENST00000622183 IRS1P35568 1242 aa7.92□□□□□ -1.14
CPNE3-213ENST00000622183 HDLBPQ00341 1268 aaKnown RBP7.92□□□□□ -1.14
CPNE3-213ENST00000622183 TNP2Q05952 138 aa7.92□□□□□ -1.14
CPNE3-213ENST00000622183 CCINQ13939 588 aa7.92□□□□□ -1.14
CPNE3-213ENST00000622183 TTC39BQ5VTQ0 682 aaPredicted RBP7.92□□□□□ -1.14
CPNE3-213ENST00000622183 GALNT12Q8IXK2 581 aa7.92□□□□□ -1.14
CPNE3-213ENST00000622183 C1orf127Q8N9H9 656 aa7.92□□□□□ -1.14
CPNE3-213ENST00000622183 C8orf37Q96NL8 207 aa7.92□□□□□ -1.14
CPNE3-213ENST00000622183 NDFIP2Q9NV92 336 aa7.92□□□□□ -1.14
CPNE3-213ENST00000622183 DCDC2BA2VCK2 349 aa7.91□□□□□ -1.14
CPNE3-213ENST00000622183 KHNYNO15037 678 aaKnown RBP7.91□□□□□ -1.14
CPNE3-213ENST00000622183 SASH3O75995 380 aa7.91□□□□□ -1.14
CPNE3-213ENST00000622183 CTSHP09668 335 aa7.91□□□□□ -1.14
CPNE3-213ENST00000622183 MAPTP10636 758 aaKnown RBP7.91□□□□□ -1.14
CPNE3-213ENST00000622183 CES1P23141 567 aa7.91□□□□□ -1.14
CPNE3-213ENST00000622183 VEGFBP49765 207 aa7.91□□□□□ -1.14
CPNE3-213ENST00000622183 FANCCQ00597 558 aa7.91□□□□□ -1.14
CPNE3-213ENST00000622183 PI16Q6UXB8 463 aa7.91□□□□□ -1.14
CPNE3-213ENST00000622183 CCDC155Q8N6L0 562 aa7.91□□□□□ -1.14
CPNE3-213ENST00000622183 GMCL1Q96IK5 515 aa7.91□□□□□ -1.14
CPNE3-213ENST00000622183 GSX2Q9BZM3 304 aa7.91□□□□□ -1.14
CPNE3-213ENST00000622183 C12orf49Q9H741 205 aa7.91□□□□□ -1.14
CPNE3-213ENST00000622183 CUEDC1Q9NWM3 386 aaPredicted RBP7.91□□□□□ -1.14
CPNE3-213ENST00000622183 IGSF3O75054 1194 aa7.9□□□□□ -1.14
CPNE3-213ENST00000622183 POLR3DP05423 398 aaPredicted RBP7.9□□□□□ -1.14
CPNE3-213ENST00000622183 DBN1Q16643 649 aa7.9□□□□□ -1.14
CPNE3-213ENST00000622183 METTL16Q86W50 562 aaKnown RBP7.9□□□□□ -1.14
CPNE3-213ENST00000622183 TRIM47Q96LD4 638 aa7.9□□□□□ -1.14
CPNE3-213ENST00000622183 OSBPL7Q9BZF2 842 aa7.9□□□□□ -1.14
CPNE3-213ENST00000622183 SRCIN1Q9C0H9 1055 aa7.9□□□□□ -1.14
CPNE3-213ENST00000622183 EFCC1Q9HA90 598 aa7.9□□□□□ -1.14
CPNE3-213ENST00000622183 NPHS2Q9NP85 383 aa7.9□□□□□ -1.14
CPNE3-213ENST00000622183 BNIP3LO60238 219 aa7.89□□□□□ -1.15
CPNE3-213ENST00000622183 TARSP26639 723 aaKnown RBP7.89□□□□□ -1.15
CPNE3-213ENST00000622183 ERCC5P28715 1186 aaPredicted RBP7.89□□□□□ -1.15
CPNE3-213ENST00000622183 ZNF76P36508 570 aa7.89□□□□□ -1.15
CPNE3-213ENST00000622183 ZC3H6P61129 1189 aaKnown RBP7.89□□□□□ -1.15
CPNE3-213ENST00000622183 OR13H1Q8NG92 308 aa7.89□□□□□ -1.15
CPNE3-213ENST00000622183 STRN4Q9NRL3 753 aa7.89□□□□□ -1.15
CPNE3-213ENST00000622183 HCN2Q9UL51 889 aa7.89□□□□□ -1.15
CPNE3-213ENST00000622183 MMP20O60882 483 aa7.88□□□□□ -1.15
CPNE3-213ENST00000622183 MAP3K6O95382 1288 aa7.88□□□□□ -1.15
CPNE3-213ENST00000622183 CYP2E1P05181 493 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-213ENST00000622183 EDN3P14138 238 aa7.88□□□□□ -1.15
CPNE3-213ENST00000622183 ITGA6P23229 1130 aa7.88□□□□□ -1.15
CPNE3-213ENST00000622183 SPEM2Q0P670 501 aa7.88□□□□□ -1.15
CPNE3-213ENST00000622183 C9orf131Q5VYM1 1079 aa7.88□□□□□ -1.15
CPNE3-213ENST00000622183 KRT25Q7Z3Z0 450 aa7.88□□□□□ -1.15
CPNE3-213ENST00000622183 RNF34Q969K3 372 aa7.88□□□□□ -1.15
CPNE3-213ENST00000622183 ZNF837Q96EG3 531 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-213ENST00000622183 SUV39H2Q9H5I1 410 aa7.88□□□□□ -1.15
CPNE3-213ENST00000622183 MARK1Q9P0L2 795 aa7.88□□□□□ -1.15
CPNE3-213ENST00000622183 ZFATQ9P243 1243 aa7.88□□□□□ -1.15
CPNE3-213ENST00000622183 FAM8A1Q9UBU6 413 aa7.88□□□□□ -1.15
CPNE3-213ENST00000622183 ATXN7L1Q9ULK2 861 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-213ENST00000622183 GADD45BO75293 160 aaPredicted RBP7.87□□□□□ -1.15
CPNE3-213ENST00000622183 RARAP10276 462 aa7.87□□□□□ -1.15
CPNE3-213ENST00000622183 KIAA0319Q5VV43 1072 aa7.87□□□□□ -1.15
CPNE3-213ENST00000622183 NT5DC4Q86YG4 428 aa7.87□□□□□ -1.15
CPNE3-213ENST00000622183 ABHD17AQ96GS6 310 aa7.87□□□□□ -1.15
CPNE3-213ENST00000622183 BCO2Q9BYV7 579 aa7.87□□□□□ -1.15
CPNE3-213ENST00000622183 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.87□□□□□ -1.15
CPNE3-213ENST00000622183 PHF20L1A8MW92 1017 aa7.86□□□□□ -1.15
CPNE3-213ENST00000622183 HOXD8P13378 290 aaPredicted RBP7.86□□□□□ -1.15
CPNE3-213ENST00000622183 NFKB1P19838 968 aa7.86□□□□□ -1.15
CPNE3-213ENST00000622183 SOX18P35713 384 aa7.86□□□□□ -1.15
CPNE3-213ENST00000622183 RAD51AP2Q09MP3 1159 aa7.86□□□□□ -1.15
CPNE3-213ENST00000622183 GRIN2CQ14957 1233 aa7.86□□□□□ -1.15
CPNE3-213ENST00000622183 FAM182BQ5T319 152 aa7.86□□□□□ -1.15
CPNE3-213ENST00000622183 NXPE4Q6UWF7 544 aa7.86□□□□□ -1.15
CPNE3-213ENST00000622183 PNMA5Q96PV4 448 aa7.86□□□□□ -1.15
CPNE3-213ENST00000622183 TLR7Q9NYK1 1049 aaKnown RBP7.86□□□□□ -1.15
CPNE3-213ENST00000622183 KANSL3Q9P2N6 904 aa7.86□□□□□ -1.15
CPNE3-213ENST00000622183 POTECB2RU33 542 aa7.85□□□□□ -1.15
CPNE3-213ENST00000622183 PSAPP07602 524 aa7.85□□□□□ -1.15
CPNE3-213ENST00000622183 CD33P20138 364 aa7.85□□□□□ -1.15
CPNE3-213ENST00000622183 GRM2Q14416 872 aa7.85□□□□□ -1.15
CPNE3-213ENST00000622183 PEAR1Q5VY43 1037 aaPredicted RBP7.85□□□□□ -1.15
CPNE3-213ENST00000622183 GTPBP3Q969Y2 492 aaKnown RBP7.85□□□□□ -1.15
CPNE3-213ENST00000622183 SLC30A3Q99726 388 aa7.85□□□□□ -1.15
CPNE3-213ENST00000622183 GMPR2Q9P2T1 348 aaKnown RBP7.85□□□□□ -1.15
CPNE3-213ENST00000622183 SALL4Q9UJQ4 1053 aa7.85□□□□□ -1.15
CPNE3-213ENST00000622183 PHF24Q9UPV7 400 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms