RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 AK7Q96M32 723 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 HSPA4P34932 840 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 AK2P54819 239 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 UBAC1Q9BSL1 405 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 CCDC39Q9UFE4 941 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 TBX22Q9Y458 520 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 PTPRUQ92729 1446 aa9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 STK38Q15208 465 aa9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 CCDC83Q8IWF9 413 aa9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 CRACR2BQ8N4Y2 399 aaPredicted RBP9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 ORAI2Q96SN7 254 aa9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 PSMA5P28066 241 aa9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 RASEFQ8IZ41 740 aa9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 NOL7Q9UMY1 257 aaKnown RBP9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 PA2G4Q9UQ80 394 aaKnown RBP9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 SNX14Q9Y5W7 946 aa9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 NRKQ7Z2Y5 1582 aa9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 SGSM2O43147 1006 aa9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 RANBP6O60518 1105 aaKnown RBP9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 XBP1P17861 261 aa9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 RFC4P35249 363 aa9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 ME1P48163 572 aa9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 RBM26Q5T8P6 1007 aaKnown RBP9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 PRPF40BQ6NWY9 871 aaKnown RBP9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 KRI1Q8N9T8 703 aaKnown RBP9.73□□□□□ -0.85
PTPDC1-204ENST00000620992 POLR3DP05423 398 aaPredicted RBP9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 SLC3A2P08195 630 aaKnown RBP9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 BRMS1Q9HCU9 246 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 ZKSCAN5Q9Y2L8 839 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 CYP46A1Q9Y6A2 500 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 BLOC1S2Q6QNY1 142 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 CCDC144CPQ8IYA2 1237 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 RPGRQ92834 1020 aaKnown RBP9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 CDK5RAP3Q96JB5 506 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 VAT1LQ9HCJ6 419 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 LIMCH1Q9UPQ0 1083 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 RAD50Q92878 1312 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 IFIT1P09914 478 aaKnown RBP9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 NBPF6Q5VWK0 638 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 LARP1Q6PKG0 1096 aaKnown RBP9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 NFATC2IPQ8NCF5 419 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 ANKRD20A12PQ8NF67 263 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 PI4K2BQ8TCG2 481 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 NBPF4Q96M43 638 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 TCEANC2Q96MN5 208 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 USP25Q9UHP3 1055 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 MAP3K2Q9Y2U5 619 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 STX6O43752 255 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 GLRX3O76003 335 aaKnown RBP9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 SKIDA1Q1XH10 827 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 DZIP1Q86YF9 867 aaKnown RBP9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 ERC1Q8IUD2 1116 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 MKNK2Q9HBH9 465 aa9.72□□□□□ -0.85
PTPDC1-204ENST00000620992 EIF4A1P60842 406 aaKnown RBP9.71□□□□□ -0.85
PTPDC1-204ENST00000620992 CCDC69A6NI79 296 aa9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 PATL2C9JE40 543 aaKnown RBP9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 SYT1P21579 422 aa9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 EPS15P42566 896 aa9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 CWF19L2Q2TBE0 894 aaKnown RBP9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 HS1BP3Q53T59 392 aa9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 LARP1BQ659C4 914 aaKnown RBP9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 PDLIM2Q96JY6 352 aa9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 ZNF830Q96NB3 372 aaPredicted RBP9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 TMOD2Q9NZR1 351 aa9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 ZSCAN22P10073 491 aaPredicted RBP9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 HCLS1P14317 486 aaPredicted RBP9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 COPS6Q7L5N1 327 aa9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 IFNL2Q8IZJ0 200 aa9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 PDRG1Q9NUG6 133 aa9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 SSH2Q76I76 1423 aa9.71□□□□□ -0.86
PTPDC1-204ENST00000620992 BEND3Q5T5X7 828 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 SPC24Q8NBT2 197 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 ZNF652Q9Y2D9 606 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 UQCRHLA0A096LP55 91 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 GOLIM4O00461 696 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 UQCRHP07919 91 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 ATP6V1AP38606 617 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 NBPF5PQ86XG9 351 aaPredicted RBP9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 AOX1Q06278 1338 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 KINO60870 393 aaKnown RBP9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 DDB1Q16531 1140 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 CAVIN4Q5BKX8 364 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 RUFY3Q7L099 469 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 NECAB1Q8N987 351 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 LSG1Q9H089 658 aaKnown RBP9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 TFCP2L1Q9NZI6 479 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 GJB2P29033 226 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 POLA2Q14181 598 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 TRIM22Q8IYM9 498 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 C19orf44Q9H6X5 657 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 ECHDC1Q9NTX5 307 aa9.7□□□□□ -0.86
PTPDC1-204ENST00000620992 PTH1RQ03431 593 aa9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 FAM182BQ5T319 152 aa9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 CCDC183Q5T5S1 534 aa9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 DBF4Q9UBU7 674 aaPredicted RBP9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 LARGE1O95461 756 aa9.69□□□□□ -0.86
PTPDC1-204ENST00000620992 ODF2Q5BJF6 829 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms