RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 CDHR2Q9BYE9 1310 aa28.73■■■□□ 2.19
SRRT-218ENST00000620394 MAP2K2P36507 400 aa28.72■■■□□ 2.19
SRRT-218ENST00000620394 COPS6Q7L5N1 327 aa28.72■■■□□ 2.19
SRRT-218ENST00000620394 XAGE3Q8WTP9 111 aa28.72■■■□□ 2.19
SRRT-218ENST00000620394 HSP90AB3PQ58FF7 597 aa28.71■■■□□ 2.19
SRRT-218ENST00000620394 NECTIN2Q92692 538 aa28.71■■■□□ 2.19
SRRT-218ENST00000620394 RTFDC1Q9BY42 306 aaPredicted RBP28.71■■■□□ 2.19
SRRT-218ENST00000620394 ZNRF3Q9ULT6 936 aa28.71■■■□□ 2.19
SRRT-218ENST00000620394 ABCC4O15439 1325 aa28.7■■■□□ 2.19
SRRT-218ENST00000620394 SLC34A2O95436 690 aa28.7■■■□□ 2.18
SRRT-218ENST00000620394 SLC10A5Q5PT55 438 aa28.7■■■□□ 2.18
SRRT-218ENST00000620394 LAS1LQ9Y4W2 734 aaKnown RBP28.7■■■□□ 2.18
SRRT-218ENST00000620394 CA12O43570 354 aa28.69■■■□□ 2.18
SRRT-218ENST00000620394 ZNF853P0CG23 659 aa28.69■■■□□ 2.18
SRRT-218ENST00000620394 SAPCD2Q86UD0 394 aa28.69■■■□□ 2.18
SRRT-218ENST00000620394 HHIPL1Q96JK4 782 aa28.69■■■□□ 2.18
SRRT-218ENST00000620394 UTP14AQ9BVJ6 771 aaKnown RBP28.69■■■□□ 2.18
SRRT-218ENST00000620394 CHPF2Q9P2E5 772 aa28.69■■■□□ 2.18
SRRT-218ENST00000620394 CELF2O95319 508 aaKnown RBP28.68■■■□□ 2.18
SRRT-218ENST00000620394 CXCL9Q07325 125 aa28.68■■■□□ 2.18
SRRT-218ENST00000620394 HDGFL1Q5TGJ6 251 aa28.68■■■□□ 2.18
SRRT-218ENST00000620394 LRRC37AA6NMS7 1700 aa28.68■■■□□ 2.18
SRRT-218ENST00000620394 DDX60Q8IY21 1712 aaKnown RBP28.67■■■□□ 2.18
SRRT-218ENST00000620394 CCDC85CA6NKD9 419 aa28.67■■■□□ 2.18
SRRT-218ENST00000620394 GMPSP49915 693 aaPredicted RBP28.67■■■□□ 2.18
SRRT-218ENST00000620394 NLRP10Q86W26 655 aa28.67■■■□□ 2.18
SRRT-218ENST00000620394 MBIPQ9NS73 344 aa28.67■■■□□ 2.18
SRRT-218ENST00000620394 APAF1O14727 1248 aa28.66■■■□□ 2.18
SRRT-218ENST00000620394 AOC2O75106 756 aa28.66■■■□□ 2.18
SRRT-218ENST00000620394 AIMP1Q12904 312 aaKnown RBP28.66■■■□□ 2.18
SRRT-218ENST00000620394 TCIRG1Q13488 830 aa28.66■■■□□ 2.18
SRRT-218ENST00000620394 DPP8Q6V1X1 898 aaPredicted RBP28.66■■■□□ 2.18
SRRT-218ENST00000620394 MLLT1Q03111 559 aaPredicted RBP28.65■■■□□ 2.18
SRRT-218ENST00000620394 KIAA2012Q0VF49 1180 aa28.65■■■□□ 2.18
SRRT-218ENST00000620394 CIAPIN1Q6FI81 312 aa28.65■■■□□ 2.18
SRRT-218ENST00000620394 ZC3H15Q8WU90 426 aaKnown RBP28.65■■■□□ 2.18
SRRT-218ENST00000620394 GLIS2Q9BZE0 524 aaPredicted RBP28.65■■■□□ 2.18
SRRT-218ENST00000620394 IFT57Q9NWB7 429 aa28.65■■■□□ 2.18
SRRT-218ENST00000620394 DBF4Q9UBU7 674 aaPredicted RBP28.65■■■□□ 2.18
SRRT-218ENST00000620394 TSKSQ9UJT2 592 aa28.65■■■□□ 2.18
SRRT-218ENST00000620394 DUOX1Q9NRD9 1551 aa28.64■■■□□ 2.18
SRRT-218ENST00000620394 BBOX1O75936 387 aa28.64■■■□□ 2.18
SRRT-218ENST00000620394 BRPF1P55201 1214 aaPredicted RBP28.64■■■□□ 2.18
SRRT-218ENST00000620394 SP8Q8IXZ3 490 aa28.64■■■□□ 2.18
SRRT-218ENST00000620394 PGAP2Q9UHJ9 254 aa28.64■■■□□ 2.18
SRRT-218ENST00000620394 DUSP27Q5VZP5 1158 aa28.63■■■□□ 2.17
SRRT-218ENST00000620394 MPNDQ8N594 471 aa28.63■■■□□ 2.17
SRRT-218ENST00000620394 PLBD2Q8NHP8 589 aa28.63■■■□□ 2.17
SRRT-218ENST00000620394 BCL2L13Q9BXK5 485 aa28.63■■■□□ 2.17
SRRT-218ENST00000620394 RGS19P49795 217 aa28.62■■■□□ 2.17
SRRT-218ENST00000620394 CALD1Q05682 793 aaKnown RBP28.62■■■□□ 2.17
SRRT-218ENST00000620394 TNIP1Q15025 636 aa28.62■■■□□ 2.17
SRRT-218ENST00000620394 ZEB1P37275 1124 aaPredicted RBP28.6■■■□□ 2.17
SRRT-218ENST00000620394 GNAI1P63096 354 aa28.6■■■□□ 2.17
SRRT-218ENST00000620394 HYPKQ9NX55 129 aa28.6■■■□□ 2.17
SRRT-218ENST00000620394 CASP8AP2Q9UKL3 1982 aa28.6■■■□□ 2.17
SRRT-218ENST00000620394 SH3TC1Q8TE82 1336 aa28.6■■■□□ 2.17
SRRT-218ENST00000620394 DDX46Q7L014 1031 aaKnown RBP28.59■■■□□ 2.17
SRRT-218ENST00000620394 CDC37L1Q7L3B6 337 aa28.59■■■□□ 2.17
SRRT-218ENST00000620394 ZNF408Q9H9D4 720 aa28.59■■■□□ 2.17
SRRT-218ENST00000620394 TAF1P21675 1872 aa28.59■■■□□ 2.17
SRRT-218ENST00000620394 RAD17O75943 681 aa28.58■■■□□ 2.17
SRRT-218ENST00000620394 GRAPQ13588 217 aa28.58■■■□□ 2.17
SRRT-218ENST00000620394 ANKRD13DQ6ZTN6 518 aa28.58■■■□□ 2.17
SRRT-218ENST00000620394 TMC4Q7Z404 712 aa28.58■■■□□ 2.17
SRRT-218ENST00000620394 GRAPLQ8TC17 118 aaPredicted RBP28.58■■■□□ 2.17
SRRT-218ENST00000620394 TRPM4Q8TD43 1214 aa28.58■■■□□ 2.17
SRRT-218ENST00000620394 ISCA1Q9BUE6 129 aa28.58■■■□□ 2.17
SRRT-218ENST00000620394 TRMT112Q9UI30 125 aaKnown RBP28.58■■■□□ 2.17
SRRT-218ENST00000620394 MCOLN1Q9GZU1 580 aa28.57■■■□□ 2.16
SRRT-218ENST00000620394 HCLS1P14317 486 aaPredicted RBP28.56■■■□□ 2.16
SRRT-218ENST00000620394 HIRAP54198 1017 aaPredicted RBP28.56■■■□□ 2.16
SRRT-218ENST00000620394 NOGQ13253 232 aa28.56■■■□□ 2.16
SRRT-218ENST00000620394 CCDC184Q52MB2 194 aa28.56■■■□□ 2.16
SRRT-218ENST00000620394 CNOT7Q9UIV1 285 aaKnown RBP28.55■■■□□ 2.16
SRRT-218ENST00000620394 YDJCA8MPS7 323 aa28.54■■■□□ 2.16
SRRT-218ENST00000620394 H7C1D1 291 aa28.54■■■□□ 2.16
SRRT-218ENST00000620394 MICALL2Q8IY33 904 aa28.53■■■□□ 2.16
SRRT-218ENST00000620394 TRIM28Q13263 835 aaKnown RBP28.52■■■□□ 2.16
SRRT-218ENST00000620394 CCDC27Q2M243 656 aa28.51■■■□□ 2.15
SRRT-218ENST00000620394 SHTN1A0MZ66 631 aa28.5■■■□□ 2.15
SRRT-218ENST00000620394 HUNKP57058 714 aa28.5■■■□□ 2.15
SRRT-218ENST00000620394 DPF2Q92785 391 aa28.5■■■□□ 2.15
SRRT-218ENST00000620394 DGKZQ13574 1117 aa28.49■■■□□ 2.15
SRRT-218ENST00000620394 C8orf58Q8NAV2 365 aa28.49■■■□□ 2.15
SRRT-218ENST00000620394 COL4A1P02462 1669 aa28.48■■■□□ 2.15
SRRT-218ENST00000620394 ATP5J2-PTCD1G3V325 749 aa28.48■■■□□ 2.15
SRRT-218ENST00000620394 GOLGA2Q08379 1002 aa28.47■■■□□ 2.15
SRRT-218ENST00000620394 SF3B3Q15393 1217 aaKnown RBP28.47■■■□□ 2.15
SRRT-218ENST00000620394 USP48Q86UV5 1035 aa28.47■■■□□ 2.15
SRRT-218ENST00000620394 FAM89AQ96GI7 184 aa28.47■■■□□ 2.15
SRRT-218ENST00000620394 PHAXQ9H814 394 aaKnown RBP28.47■■■□□ 2.15
SRRT-218ENST00000620394 ELL2O00472 640 aaPredicted RBP28.46■■■□□ 2.15
SRRT-218ENST00000620394 PSMD14O00487 310 aa28.46■■■□□ 2.15
SRRT-218ENST00000620394 WASHC4Q2M389 1173 aa28.46■■■□□ 2.15
SRRT-218ENST00000620394 NCBP3Q53F19 620 aaKnown RBP28.46■■■□□ 2.15
SRRT-218ENST00000620394 CHMP4AQ9BY43 222 aa28.46■■■□□ 2.15
SRRT-218ENST00000620394 ZBTB12Q9Y330 459 aaPredicted RBP28.46■■■□□ 2.15
SRRT-218ENST00000620394 POLR2AP24928 1970 aaKnown RBP28.46■■■□□ 2.15
SRRT-218ENST00000620394 RPS12P25398 132 aaKnown RBP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms