RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 IFIT5Q13325 482 aaKnown RBP23.03■■□□□ 1.28
PSPC1-206ENST00000619300 IL27Q8NEV9 243 aa23.03■■□□□ 1.28
PSPC1-206ENST00000619300 NEUROD6Q96NK8 337 aa23.03■■□□□ 1.28
PSPC1-206ENST00000619300 MCM2P49736 904 aa23.02■■□□□ 1.28
PSPC1-206ENST00000619300 TIMM10P62072 90 aa23.02■■□□□ 1.28
PSPC1-206ENST00000619300 NMIQ13287 307 aaPredicted RBP23.02■■□□□ 1.28
PSPC1-206ENST00000619300 HAUS7Q99871 368 aa23.02■■□□□ 1.28
PSPC1-206ENST00000619300 CEP126Q9P2H0 1117 aa23.02■■□□□ 1.28
PSPC1-206ENST00000619300 IRS4O14654 1257 aaPredicted RBP23.01■■□□□ 1.27
PSPC1-206ENST00000619300 TTLL11Q8NHH1 800 aa23.01■■□□□ 1.27
PSPC1-206ENST00000619300 FAM227BQ96M60 508 aa23.01■■□□□ 1.27
PSPC1-206ENST00000619300 CCDC85AQ96PX6 553 aaPredicted RBP23.01■■□□□ 1.27
PSPC1-206ENST00000619300 SNRKQ9NRH2 765 aa23.01■■□□□ 1.27
PSPC1-206ENST00000619300 CERKQ8TCT0 537 aa23.01■■□□□ 1.27
PSPC1-206ENST00000619300 UBN2Q6ZU65 1347 aa23■■□□□ 1.27
PSPC1-206ENST00000619300 CTSWP56202 376 aa23■■□□□ 1.27
PSPC1-206ENST00000619300 PTH1RQ03431 593 aa23■■□□□ 1.27
PSPC1-206ENST00000619300 TAF7LQ5H9L4 462 aa23■■□□□ 1.27
PSPC1-206ENST00000619300 EDC3Q96F86 508 aaKnown RBP23■■□□□ 1.27
PSPC1-206ENST00000619300 SNX14Q9Y5W7 946 aa22.99■■□□□ 1.27
PSPC1-206ENST00000619300 A0A1B0GUL7 405 aa22.98■■□□□ 1.27
PSPC1-206ENST00000619300 PDE8AO60658 829 aa22.98■■□□□ 1.27
PSPC1-206ENST00000619300 CAMTA2O94983 1202 aa22.98■■□□□ 1.27
PSPC1-206ENST00000619300 AKAP2Q9Y2D5 859 aa22.98■■□□□ 1.27
PSPC1-206ENST00000619300 DNAJC2Q99543 621 aaKnown RBP22.98■■□□□ 1.27
PSPC1-206ENST00000619300 GREM2Q9H772 168 aa22.98■■□□□ 1.27
PSPC1-206ENST00000619300 NUP98P52948 1817 aa22.97■■□□□ 1.27
PSPC1-206ENST00000619300 A0A0D9SFI3 127 aa22.97■■□□□ 1.27
PSPC1-206ENST00000619300 ITGA6P23229 1130 aa22.97■■□□□ 1.27
PSPC1-206ENST00000619300 RAB3GAP1Q15042 981 aa22.97■■□□□ 1.27
PSPC1-206ENST00000619300 RASEFQ8IZ41 740 aa22.97■■□□□ 1.27
PSPC1-206ENST00000619300 AK7Q96M32 723 aa22.97■■□□□ 1.27
PSPC1-206ENST00000619300 CCDC171Q6TFL3 1326 aa22.97■■□□□ 1.27
PSPC1-206ENST00000619300 ZNF609O15014 1411 aa22.97■■□□□ 1.27
PSPC1-206ENST00000619300 CICQ96RK0 1608 aaPredicted RBP22.97■■□□□ 1.27
PSPC1-206ENST00000619300 ANKRD36CQ5JPF3 1778 aa22.97■■□□□ 1.27
PSPC1-206ENST00000619300 ANKRD18BA2A2Z9 1011 aa22.96■■□□□ 1.27
PSPC1-206ENST00000619300 UPF3BQ9BZI7 483 aaKnown RBP22.96■■□□□ 1.27
PSPC1-206ENST00000619300 CWC22Q9HCG8 908 aaKnown RBP22.96■■□□□ 1.27
PSPC1-206ENST00000619300 NDUFB9Q9Y6M9 179 aa22.96■■□□□ 1.27
PSPC1-206ENST00000619300 MCM4P33991 863 aa22.96■■□□□ 1.27
PSPC1-206ENST00000619300 SUSD4Q5VX71 490 aa22.96■■□□□ 1.27
PSPC1-206ENST00000619300 MAP4K1Q92918 833 aa22.96■■□□□ 1.27
PSPC1-206ENST00000619300 KCNB2Q92953 911 aa22.96■■□□□ 1.27
PSPC1-206ENST00000619300 RIPOR2Q9Y4F9 1068 aa22.96■■□□□ 1.27
PSPC1-206ENST00000619300 RREB1Q92766 1687 aa22.95■■□□□ 1.26
PSPC1-206ENST00000619300 RFX7Q2KHR2 1363 aa22.95■■□□□ 1.26
PSPC1-206ENST00000619300 NECTIN1Q15223 517 aa22.95■■□□□ 1.26
PSPC1-206ENST00000619300 TMX3Q96JJ7 454 aa22.95■■□□□ 1.26
PSPC1-206ENST00000619300 PARP10Q53GL7 1025 aa22.94■■□□□ 1.26
PSPC1-206ENST00000619300 LDHAL6AQ6ZMR3 332 aa22.94■■□□□ 1.26
PSPC1-206ENST00000619300 DEKP35659 375 aaKnown RBP22.94■■□□□ 1.26
PSPC1-206ENST00000619300 MEX3CQ5U5Q3 659 aaKnown RBP22.94■■□□□ 1.26
PSPC1-206ENST00000619300 KBTBD3Q8NAB2 608 aa22.94■■□□□ 1.26
PSPC1-206ENST00000619300 TNPO1Q92973 898 aaKnown RBP22.94■■□□□ 1.26
PSPC1-206ENST00000619300 UTP14AQ9BVJ6 771 aaKnown RBP22.94■■□□□ 1.26
PSPC1-206ENST00000619300 MED23Q9ULK4 1368 aa22.93■■□□□ 1.26
PSPC1-206ENST00000619300 SH3TC1Q8TE82 1336 aa22.93■■□□□ 1.26
PSPC1-206ENST00000619300 PRPF40BQ6NWY9 871 aaKnown RBP22.93■■□□□ 1.26
PSPC1-206ENST00000619300 TICAM2Q86XR7 235 aa22.93■■□□□ 1.26
PSPC1-206ENST00000619300 LINC00116Q8NCU8 138 aa22.93■■□□□ 1.26
PSPC1-206ENST00000619300 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.93■■□□□ 1.26
PSPC1-206ENST00000619300 DDX46Q7L014 1031 aaKnown RBP22.92■■□□□ 1.26
PSPC1-206ENST00000619300 PAG1Q9NWQ8 432 aa22.92■■□□□ 1.26
PSPC1-206ENST00000619300 RBM8AQ9Y5S9 174 aaKnown RBP22.92■■□□□ 1.26
PSPC1-206ENST00000619300 IFIT1P09914 478 aaKnown RBP22.92■■□□□ 1.26
PSPC1-206ENST00000619300 PTF1AQ7RTS3 328 aa22.92■■□□□ 1.26
PSPC1-206ENST00000619300 MYH14Q7Z406 1995 aaKnown RBP22.92■■□□□ 1.26
PSPC1-206ENST00000619300 HSPA1LP34931 641 aa22.91■■□□□ 1.26
PSPC1-206ENST00000619300 KCNJ4P48050 445 aa22.91■■□□□ 1.26
PSPC1-206ENST00000619300 CUL4AQ13619 759 aa22.91■■□□□ 1.26
PSPC1-206ENST00000619300 METTL24Q5JXM2 366 aa22.91■■□□□ 1.26
PSPC1-206ENST00000619300 CCDC158Q5M9N0 1113 aa22.91■■□□□ 1.26
PSPC1-206ENST00000619300 XAGE2Q96GT9 111 aa22.91■■□□□ 1.26
PSPC1-206ENST00000619300 GJD4Q96KN9 370 aaPredicted RBP22.91■■□□□ 1.26
PSPC1-206ENST00000619300 GOLIM4O00461 696 aa22.91■■□□□ 1.26
PSPC1-206ENST00000619300 GORABQ5T7V8 394 aa22.91■■□□□ 1.26
PSPC1-206ENST00000619300 ZNF589Q86UQ0 364 aaPredicted RBP22.91■■□□□ 1.26
PSPC1-206ENST00000619300 ZGPATQ8N5A5 531 aaKnown RBP22.91■■□□□ 1.26
PSPC1-206ENST00000619300 CNNM1Q9NRU3 951 aa22.91■■□□□ 1.26
PSPC1-206ENST00000619300 NIP7Q9Y221 180 aaKnown RBP eCLIP22.91■■□□□ 1.26
PSPC1-206ENST00000619300 ZKSCAN1P17029 563 aaPredicted RBP22.9■■□□□ 1.26
PSPC1-206ENST00000619300 CREB3L3Q68CJ9 461 aa22.9■■□□□ 1.26
PSPC1-206ENST00000619300 TM6SF1Q9BZW5 370 aa22.9■■□□□ 1.26
PSPC1-206ENST00000619300 ZNF652Q9Y2D9 606 aa22.9■■□□□ 1.26
PSPC1-206ENST00000619300 ZNF831Q5JPB2 1677 aa22.89■■□□□ 1.26
PSPC1-206ENST00000619300 TAF5LO75529 589 aa22.89■■□□□ 1.26
PSPC1-206ENST00000619300 HCLS1P14317 486 aaPredicted RBP22.89■■□□□ 1.26
PSPC1-206ENST00000619300 ADORA1P30542 326 aa22.89■■□□□ 1.26
PSPC1-206ENST00000619300 NUCB2P80303 420 aa22.89■■□□□ 1.26
PSPC1-206ENST00000619300 CLEC4GQ6UXB4 293 aa22.89■■□□□ 1.26
PSPC1-206ENST00000619300 TTC14Q96N46 770 aa22.89■■□□□ 1.26
PSPC1-206ENST00000619300 FAM177BA6PVY3 158 aa22.89■■□□□ 1.25
PSPC1-206ENST00000619300 MCMDC2Q4G0Z9 681 aa22.89■■□□□ 1.25
PSPC1-206ENST00000619300 CNTNAP4Q9C0A0 1308 aa22.88■■□□□ 1.25
PSPC1-206ENST00000619300 HSP90B1P14625 803 aaKnown RBP22.88■■□□□ 1.25
PSPC1-206ENST00000619300 KCNQ4P56696 695 aa22.88■■□□□ 1.25
PSPC1-206ENST00000619300 TTC39AQ5SRH9 613 aa22.88■■□□□ 1.25
PSPC1-206ENST00000619300 THSD7AQ9UPZ6 1657 aa22.88■■□□□ 1.25
PSPC1-206ENST00000619300 CASTP20810 708 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms