RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 SIPA1L3O60292 1781 aaPredicted RBP24.19■■□□□ 1.46
NEK3-208ENST00000618534 LEO1Q8WVC0 666 aaPredicted RBP24.19■■□□□ 1.46
NEK3-208ENST00000618534 KIF3AQ9Y496 699 aa24.19■■□□□ 1.46
NEK3-208ENST00000618534 GOLGA6L4A6NEF3 574 aa24.18■■□□□ 1.46
NEK3-208ENST00000618534 CCDC94Q9BW85 323 aaPredicted RBP24.18■■□□□ 1.46
NEK3-208ENST00000618534 PTGS1P23219 599 aa24.18■■□□□ 1.46
NEK3-208ENST00000618534 ANO6Q4KMQ2 910 aa24.18■■□□□ 1.46
NEK3-208ENST00000618534 CBX8Q9HC52 389 aa24.18■■□□□ 1.46
NEK3-208ENST00000618534 HMG20BQ9P0W2 317 aa24.18■■□□□ 1.46
NEK3-208ENST00000618534 NPHP3Q7Z494 1330 aa24.17■■□□□ 1.46
NEK3-208ENST00000618534 TAF5LO75529 589 aa24.17■■□□□ 1.46
NEK3-208ENST00000618534 RIC3Q7Z5B4 369 aa24.17■■□□□ 1.46
NEK3-208ENST00000618534 MRC1P22897 1456 aa24.17■■□□□ 1.46
NEK3-208ENST00000618534 EPHA10Q5JZY3 1008 aa24.16■■□□□ 1.46
NEK3-208ENST00000618534 ANKRD24Q8TF21 1146 aa24.16■■□□□ 1.46
NEK3-208ENST00000618534 JAK2O60674 1132 aa24.16■■□□□ 1.46
NEK3-208ENST00000618534 TSGA10IPQ3SY00 556 aa24.16■■□□□ 1.46
NEK3-208ENST00000618534 COL15A1P39059 1388 aa24.16■■□□□ 1.46
NEK3-208ENST00000618534 GCP02774 474 aa24.15■■□□□ 1.46
NEK3-208ENST00000618534 ARHGEF25Q86VW2 580 aa24.15■■□□□ 1.46
NEK3-208ENST00000618534 CLSTN2Q9H4D0 955 aa24.15■■□□□ 1.46
NEK3-208ENST00000618534 DDX19AQ9NUU7 478 aaKnown RBP24.15■■□□□ 1.46
NEK3-208ENST00000618534 NEURL1BA8MQ27 555 aa24.14■■□□□ 1.46
NEK3-208ENST00000618534 BCL2L12Q9HB09 334 aa24.14■■□□□ 1.46
NEK3-208ENST00000618534 RBM43Q6ZSC3 357 aaKnown RBP24.14■■□□□ 1.45
NEK3-208ENST00000618534 PGBD1Q96JS3 809 aa24.14■■□□□ 1.45
NEK3-208ENST00000618534 NR1I2O75469 434 aa24.13■■□□□ 1.45
NEK3-208ENST00000618534 MYL6BP14649 208 aa24.13■■□□□ 1.45
NEK3-208ENST00000618534 USPL1Q5W0Q7 1092 aa24.13■■□□□ 1.45
NEK3-208ENST00000618534 GTF3C6Q969F1 213 aa24.13■■□□□ 1.45
NEK3-208ENST00000618534 RIOK3O14730 519 aaKnown RBP24.13■■□□□ 1.45
NEK3-208ENST00000618534 CHAF1AQ13111 956 aaPredicted RBP24.12■■□□□ 1.45
NEK3-208ENST00000618534 SLC39A6Q13433 755 aa24.12■■□□□ 1.45
NEK3-208ENST00000618534 GCKRQ14397 625 aa24.12■■□□□ 1.45
NEK3-208ENST00000618534 BICD2Q8TD16 824 aa24.12■■□□□ 1.45
NEK3-208ENST00000618534 DBNLQ9UJU6 430 aaKnown RBP24.12■■□□□ 1.45
NEK3-208ENST00000618534 NDUFB9Q9Y6M9 179 aa24.12■■□□□ 1.45
NEK3-208ENST00000618534 CHGBP05060 677 aa24.12■■□□□ 1.45
NEK3-208ENST00000618534 NEXNQ0ZGT2 675 aa24.12■■□□□ 1.45
NEK3-208ENST00000618534 CCDC186Q7Z3E2 898 aa24.12■■□□□ 1.45
NEK3-208ENST00000618534 BRF1Q92994 677 aa24.12■■□□□ 1.45
NEK3-208ENST00000618534 C5P01031 1676 aa24.12■■□□□ 1.45
NEK3-208ENST00000618534 RESTQ13127 1097 aa24.11■■□□□ 1.45
NEK3-208ENST00000618534 NEK1Q96PY6 1258 aa24.11■■□□□ 1.45
NEK3-208ENST00000618534 MYD88Q99836 296 aa24.11■■□□□ 1.45
NEK3-208ENST00000618534 KRT32Q14532 448 aa24.11■■□□□ 1.45
NEK3-208ENST00000618534 CCDC129Q6ZRS4 1044 aa24.11■■□□□ 1.45
NEK3-208ENST00000618534 SMAP1Q8IYB5 467 aaPredicted RBP24.11■■□□□ 1.45
NEK3-208ENST00000618534 XAGE3Q8WTP9 111 aa24.11■■□□□ 1.45
NEK3-208ENST00000618534 LRMPQ12912 555 aa24.1■■□□□ 1.45
NEK3-208ENST00000618534 DDX11Q96FC9 970 aa24.1■■□□□ 1.45
NEK3-208ENST00000618534 NRBP1Q9UHY1 535 aa24.1■■□□□ 1.45
NEK3-208ENST00000618534 AXIN2Q9Y2T1 843 aa24.1■■□□□ 1.45
NEK3-208ENST00000618534 ATP5JP18859 108 aa24.1■■□□□ 1.45
NEK3-208ENST00000618534 ZNF75DP51815 510 aa24.1■■□□□ 1.45
NEK3-208ENST00000618534 Q6ZUG5 572 aa24.1■■□□□ 1.45
NEK3-208ENST00000618534 PLA2G4DQ86XP0 818 aa24.1■■□□□ 1.45
NEK3-208ENST00000618534 DRC7Q8IY82 874 aa24.1■■□□□ 1.45
NEK3-208ENST00000618534 TDRD7Q8NHU6 1098 aaKnown RBP24.1■■□□□ 1.45
NEK3-208ENST00000618534 ZNF609O15014 1411 aa24.1■■□□□ 1.45
NEK3-208ENST00000618534 SLIT3O75094 1523 aa24.09■■□□□ 1.45
NEK3-208ENST00000618534 ADAMTS7Q9UKP4 1686 aa24.09■■□□□ 1.45
NEK3-208ENST00000618534 CAMTA1Q9Y6Y1 1673 aa24.09■■□□□ 1.45
NEK3-208ENST00000618534 TNNI3KQ59H18 835 aa24.09■■□□□ 1.45
NEK3-208ENST00000618534 TRIM5Q9C035 493 aa24.09■■□□□ 1.45
NEK3-208ENST00000618534 DNAJC25Q9H1X3 360 aa24.09■■□□□ 1.45
NEK3-208ENST00000618534 FPGT-TNNI3KV9GXZ4 949 aa24.09■■□□□ 1.45
NEK3-208ENST00000618534 HSP90B1P14625 803 aaKnown RBP24.09■■□□□ 1.45
NEK3-208ENST00000618534 TFCP2Q12800 502 aa24.09■■□□□ 1.45
NEK3-208ENST00000618534 LMOD2Q6P5Q4 547 aa24.09■■□□□ 1.45
NEK3-208ENST00000618534 ZNF790Q6PG37 636 aa24.09■■□□□ 1.45
NEK3-208ENST00000618534 COPS6Q7L5N1 327 aa24.09■■□□□ 1.45
NEK3-208ENST00000618534 SEC62Q99442 399 aaKnown RBP24.08■■□□□ 1.45
NEK3-208ENST00000618534 METTL22Q9BUU2 404 aaPredicted RBP24.08■■□□□ 1.45
NEK3-208ENST00000618534 COPRSQ9NQ92 184 aa24.08■■□□□ 1.45
NEK3-208ENST00000618534 PRDM10Q9NQV6 1147 aa24.08■■□□□ 1.45
NEK3-208ENST00000618534 ZNF165P49910 485 aa24.08■■□□□ 1.44
NEK3-208ENST00000618534 RFX5P48382 616 aaPredicted RBP24.07■■□□□ 1.44
NEK3-208ENST00000618534 DNAJC2Q99543 621 aaKnown RBP24.07■■□□□ 1.44
NEK3-208ENST00000618534 PRDM4Q9UKN5 801 aa24.07■■□□□ 1.44
NEK3-208ENST00000618534 H3BQV1 296 aa24.06■■□□□ 1.44
NEK3-208ENST00000618534 CYP21A2P08686 494 aa24.06■■□□□ 1.44
NEK3-208ENST00000618534 PTPN12Q05209 780 aaKnown RBP24.06■■□□□ 1.44
NEK3-208ENST00000618534 IFFO2Q5TF58 517 aa24.06■■□□□ 1.44
NEK3-208ENST00000618534 LRRC2Q9BYS8 371 aa24.06■■□□□ 1.44
NEK3-208ENST00000618534 ORAI2Q96SN7 254 aa24.06■■□□□ 1.44
NEK3-208ENST00000618534 U3KPZ7 1027 aaPredicted RBP24.06■■□□□ 1.44
NEK3-208ENST00000618534 PPP4R3BQ5MIZ7 849 aa24.05■■□□□ 1.44
NEK3-208ENST00000618534 ZSCAN25Q6NSZ9 544 aa24.05■■□□□ 1.44
NEK3-208ENST00000618534 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.05■■□□□ 1.44
NEK3-208ENST00000618534 DBNDD2Q9BQY9 259 aa24.05■■□□□ 1.44
NEK3-208ENST00000618534 SCRN1Q12765 414 aa24.04■■□□□ 1.44
NEK3-208ENST00000618534 PIP4K2AP48426 406 aaPredicted RBP24.04■■□□□ 1.44
NEK3-208ENST00000618534 LMTK3Q96Q04 1460 aa24.04■■□□□ 1.44
NEK3-208ENST00000618534 RFX7Q2KHR2 1363 aa24.04■■□□□ 1.44
NEK3-208ENST00000618534 CEBPZQ03701 1054 aaKnown RBP24.03■■□□□ 1.44
NEK3-208ENST00000618534 DDX46Q7L014 1031 aaKnown RBP24.03■■□□□ 1.44
NEK3-208ENST00000618534 ZSCAN16Q9H4T2 348 aaPredicted RBP24.03■■□□□ 1.44
NEK3-208ENST00000618534 SLC52A2Q9HAB3 445 aa24.03■■□□□ 1.44
NEK3-208ENST00000618534 KDM6AO15550 1401 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms