RNA–Protein interactions for RNA: ENST00000617462.4

CPEB1-213, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-213ENST00000617462 CSF1RP07333 972 aa16.76■□□□□ 0.27
CPEB1-213ENST00000617462 MYT1Q01538 1121 aa16.76■□□□□ 0.27
CPEB1-213ENST00000617462 COL9A3Q14050 684 aaPredicted RBP16.76■□□□□ 0.27
CPEB1-213ENST00000617462 ILDR1Q86SU0 546 aaPredicted RBP16.76■□□□□ 0.27
CPEB1-213ENST00000617462 GREM2Q9H772 168 aa16.76■□□□□ 0.27
CPEB1-213ENST00000617462 FAM177BA6PVY3 158 aa16.75■□□□□ 0.27
CPEB1-213ENST00000617462 NEUROD6Q96NK8 337 aa16.75■□□□□ 0.27
CPEB1-213ENST00000617462 PLA2G12BQ9BX93 195 aa16.75■□□□□ 0.27
CPEB1-213ENST00000617462 THSD7AQ9UPZ6 1657 aa16.75■□□□□ 0.27
CPEB1-213ENST00000617462 ATP5JP18859 108 aa16.74■□□□□ 0.27
CPEB1-213ENST00000617462 HSPA1LP34931 641 aa16.74■□□□□ 0.27
CPEB1-213ENST00000617462 NOL8Q76FK4 1167 aaKnown RBP16.74■□□□□ 0.27
CPEB1-213ENST00000617462 ZNF589Q86UQ0 364 aaPredicted RBP16.74■□□□□ 0.27
CPEB1-213ENST00000617462 ZNF34Q8IZ26 560 aa16.74■□□□□ 0.27
CPEB1-213ENST00000617462 ZGPATQ8N5A5 531 aaKnown RBP16.74■□□□□ 0.27
CPEB1-213ENST00000617462 LINC00116Q8NCU8 138 aa16.74■□□□□ 0.27
CPEB1-213ENST00000617462 TTLL11Q8NHH1 800 aa16.74■□□□□ 0.27
CPEB1-213ENST00000617462 FSD1Q9BTV5 496 aa16.74■□□□□ 0.27
CPEB1-213ENST00000617462 BTAF1O14981 1849 aa16.74■□□□□ 0.27
CPEB1-213ENST00000617462 CAMTA2O94983 1202 aa16.74■□□□□ 0.27
CPEB1-213ENST00000617462 IL15P40933 162 aaPredicted RBP16.74■□□□□ 0.27
CPEB1-213ENST00000617462 DNAJC2Q99543 621 aaKnown RBP16.74■□□□□ 0.27
CPEB1-213ENST00000617462 TRMT112Q9UI30 125 aaKnown RBP16.74■□□□□ 0.27
CPEB1-213ENST00000617462 SNX14Q9Y5W7 946 aa16.74■□□□□ 0.27
CPEB1-213ENST00000617462 CDHR2Q9BYE9 1310 aa16.73■□□□□ 0.27
CPEB1-213ENST00000617462 ERVV-1B6SEH8 477 aa16.73■□□□□ 0.27
CPEB1-213ENST00000617462 IRS4O14654 1257 aaPredicted RBP16.73■□□□□ 0.27
CPEB1-213ENST00000617462 CPA1P15085 419 aa16.73■□□□□ 0.27
CPEB1-213ENST00000617462 ADORA1P30542 326 aa16.73■□□□□ 0.27
CPEB1-213ENST00000617462 CCDC57Q2TAC2 916 aa16.73■□□□□ 0.27
CPEB1-213ENST00000617462 SUSD4Q5VX71 490 aa16.73■□□□□ 0.27
CPEB1-213ENST00000617462 CERKQ8TCT0 537 aa16.73■□□□□ 0.27
CPEB1-213ENST00000617462 IL17RAQ96F46 866 aa16.73■□□□□ 0.27
CPEB1-213ENST00000617462 COL4A1P02462 1669 aa16.73■□□□□ 0.27
CPEB1-213ENST00000617462 RIC1Q4ADV7 1423 aa16.73■□□□□ 0.27
CPEB1-213ENST00000617462 DDX60Q8IY21 1712 aaKnown RBP16.73■□□□□ 0.27
CPEB1-213ENST00000617462 PKP1Q13835 747 aa16.73■□□□□ 0.27
CPEB1-213ENST00000617462 DDX46Q7L014 1031 aaKnown RBP16.73■□□□□ 0.27
CPEB1-213ENST00000617462 A0A1B0GUL7 405 aa16.72■□□□□ 0.27
CPEB1-213ENST00000617462 HSP90AA1P07900 732 aaKnown RBP16.72■□□□□ 0.27
CPEB1-213ENST00000617462 DEKP35659 375 aaKnown RBP16.72■□□□□ 0.27
CPEB1-213ENST00000617462 SEC62Q99442 399 aaKnown RBP16.72■□□□□ 0.27
CPEB1-213ENST00000617462 TAF6LQ9Y6J9 622 aa16.72■□□□□ 0.27
CPEB1-213ENST00000617462 ST18O60284 1047 aa16.71■□□□□ 0.27
CPEB1-213ENST00000617462 CIAO1O76071 339 aa16.71■□□□□ 0.27
CPEB1-213ENST00000617462 ITGA6P23229 1130 aa16.71■□□□□ 0.27
CPEB1-213ENST00000617462 MCCP23508 829 aa16.71■□□□□ 0.27
CPEB1-213ENST00000617462 CTSWP56202 376 aa16.71■□□□□ 0.27
CPEB1-213ENST00000617462 ANAPC15P60006 121 aa16.71■□□□□ 0.27
CPEB1-213ENST00000617462 ADCK5Q3MIX3 580 aa16.71■□□□□ 0.27
CPEB1-213ENST00000617462 HAUS7Q99871 368 aa16.71■□□□□ 0.27
CPEB1-213ENST00000617462 BCORQ6W2J9 1755 aa16.71■□□□□ 0.27
CPEB1-213ENST00000617462 HCLS1P14317 486 aaPredicted RBP16.71■□□□□ 0.27
CPEB1-213ENST00000617462 HSP90AB3PQ58FF7 597 aa16.71■□□□□ 0.27
CPEB1-213ENST00000617462 CCDC129Q6ZRS4 1044 aa16.71■□□□□ 0.27
CPEB1-213ENST00000617462 TNPO1Q92973 898 aaKnown RBP16.71■□□□□ 0.27
CPEB1-213ENST00000617462 LARP6Q9BRS8 491 aaKnown RBP16.71■□□□□ 0.27
CPEB1-213ENST00000617462 MED23Q9ULK4 1368 aa16.71■□□□□ 0.26
CPEB1-213ENST00000617462 SPATA31A6Q5VVP1 1343 aa16.7■□□□□ 0.26
CPEB1-213ENST00000617462 SPEF2Q9C093 1822 aa16.7■□□□□ 0.26
CPEB1-213ENST00000617462 IFIT5Q13325 482 aaKnown RBP16.7■□□□□ 0.26
CPEB1-213ENST00000617462 PRPF40BQ6NWY9 871 aaKnown RBP16.7■□□□□ 0.26
CPEB1-213ENST00000617462 CCDC171Q6TFL3 1326 aa16.7■□□□□ 0.26
CPEB1-213ENST00000617462 SSFA2P28290 1259 aa16.69■□□□□ 0.26
CPEB1-213ENST00000617462 AMIGO3Q86WK7 504 aa16.69■□□□□ 0.26
CPEB1-213ENST00000617462 TMX3Q96JJ7 454 aa16.69■□□□□ 0.26
CPEB1-213ENST00000617462 CASZ1Q86V15 1759 aa16.69■□□□□ 0.26
CPEB1-213ENST00000617462 SBF2Q86WG5 1849 aa16.69■□□□□ 0.26
CPEB1-213ENST00000617462 RAB3GAP1Q15042 981 aa16.69■□□□□ 0.26
CPEB1-213ENST00000617462 GPR108Q9NPR9 543 aa16.69■□□□□ 0.26
CPEB1-213ENST00000617462 RIPOR2Q9Y4F9 1068 aa16.69■□□□□ 0.26
CPEB1-213ENST00000617462 TAF1P21675 1872 aa16.69■□□□□ 0.26
CPEB1-213ENST00000617462 GOLIM4O00461 696 aa16.68■□□□□ 0.26
CPEB1-213ENST00000617462 SCARF1Q14162 830 aa16.68■□□□□ 0.26
CPEB1-213ENST00000617462 NECTIN1Q15223 517 aa16.68■□□□□ 0.26
CPEB1-213ENST00000617462 KIAA1211Q6ZU35 1233 aa16.68■□□□□ 0.26
CPEB1-213ENST00000617462 RUFY2Q8WXA3 655 aa16.68■□□□□ 0.26
CPEB1-213ENST00000617462 SNRKQ9NRH2 765 aa16.68■□□□□ 0.26
CPEB1-213ENST00000617462 MYO5AQ9Y4I1 1855 aaKnown RBP16.68■□□□□ 0.26
CPEB1-213ENST00000617462 ZNF831Q5JPB2 1677 aa16.68■□□□□ 0.26
CPEB1-213ENST00000617462 NHSQ6T4R5 1651 aa16.68■□□□□ 0.26
CPEB1-213ENST00000617462 EPB41L2O43491 1005 aaKnown RBP16.68■□□□□ 0.26
CPEB1-213ENST00000617462 MCM4P33991 863 aa16.68■□□□□ 0.26
CPEB1-213ENST00000617462 PI16Q6UXB8 463 aa16.68■□□□□ 0.26
CPEB1-213ENST00000617462 CEP126Q9P2H0 1117 aa16.68■□□□□ 0.26
CPEB1-213ENST00000617462 RBM8AQ9Y5S9 174 aaKnown RBP16.68■□□□□ 0.26
CPEB1-213ENST00000617462 AFF2P51816 1311 aa16.67■□□□□ 0.26
CPEB1-213ENST00000617462 PDE8AO60658 829 aa16.67■□□□□ 0.26
CPEB1-213ENST00000617462 DTNBO60941 627 aa16.67■□□□□ 0.26
CPEB1-213ENST00000617462 TAF7LQ5H9L4 462 aa16.67■□□□□ 0.26
CPEB1-213ENST00000617462 XAGE2Q96GT9 111 aa16.67■□□□□ 0.26
CPEB1-213ENST00000617462 TTC14Q96N46 770 aa16.67■□□□□ 0.26
CPEB1-213ENST00000617462 AKAP11Q9UKA4 1901 aa16.67■□□□□ 0.26
CPEB1-213ENST00000617462 SNAP23O00161 211 aa16.66■□□□□ 0.26
CPEB1-213ENST00000617462 MAP4K1Q92918 833 aa16.66■□□□□ 0.26
CPEB1-213ENST00000617462 SMARCC1Q92922 1105 aaPredicted RBP16.66■□□□□ 0.26
CPEB1-213ENST00000617462 SEC31BQ9NQW1 1179 aa16.66■□□□□ 0.26
CPEB1-213ENST00000617462 NIP7Q9Y221 180 aaKnown RBP eCLIP16.66■□□□□ 0.26
CPEB1-213ENST00000617462 LRP5O75197 1615 aa16.66■□□□□ 0.26
CPEB1-213ENST00000617462 NTSR2O95665 410 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms