RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 CASP7P55210 303 aa20.64■□□□□ 0.89
SPTSSB-204ENST00000617024 USP44Q9H0E7 712 aa20.64■□□□□ 0.89
SPTSSB-204ENST00000617024 TNRC6CQ9HCJ0 1690 aaKnown RBP20.64■□□□□ 0.89
SPTSSB-204ENST00000617024 RLBP1P12271 317 aa20.63■□□□□ 0.89
SPTSSB-204ENST00000617024 CHRNA5P30532 468 aa20.63■□□□□ 0.89
SPTSSB-204ENST00000617024 PANK1Q8TE04 598 aa20.63■□□□□ 0.89
SPTSSB-204ENST00000617024 UTYO14607 1347 aa20.62■□□□□ 0.89
SPTSSB-204ENST00000617024 NBPF7P0C2Y1 421 aaPredicted RBP20.62■□□□□ 0.89
SPTSSB-204ENST00000617024 SRGNP10124 158 aa20.62■□□□□ 0.89
SPTSSB-204ENST00000617024 PDE3AQ14432 1141 aa20.62■□□□□ 0.89
SPTSSB-204ENST00000617024 ZNF622Q969S3 477 aaKnown RBP eCLIP20.62■□□□□ 0.89
SPTSSB-204ENST00000617024 MASTLQ96GX5 879 aa20.62■□□□□ 0.89
SPTSSB-204ENST00000617024 RIC1Q4ADV7 1423 aa20.61■□□□□ 0.89
SPTSSB-204ENST00000617024 NPR1P16066 1061 aa20.61■□□□□ 0.89
SPTSSB-204ENST00000617024 RRP1P56182 461 aaKnown RBP20.61■□□□□ 0.89
SPTSSB-204ENST00000617024 FSTL1Q12841 308 aa20.61■□□□□ 0.89
SPTSSB-204ENST00000617024 C3orf67Q6ZVT6 689 aa20.61■□□□□ 0.89
SPTSSB-204ENST00000617024 ITPRIPQ8IWB1 547 aa20.61■□□□□ 0.89
SPTSSB-204ENST00000617024 RPGRQ92834 1020 aaKnown RBP20.61■□□□□ 0.89
SPTSSB-204ENST00000617024 PLA2G12BQ9BX93 195 aa20.61■□□□□ 0.89
SPTSSB-204ENST00000617024 HDAC5Q9UQL6 1122 aa20.61■□□□□ 0.89
SPTSSB-204ENST00000617024 SF3B3Q15393 1217 aaKnown RBP20.6■□□□□ 0.89
SPTSSB-204ENST00000617024 STYK1Q6J9G0 422 aa20.6■□□□□ 0.89
SPTSSB-204ENST00000617024 C16orf71Q8IYS4 520 aaPredicted RBP20.6■□□□□ 0.89
SPTSSB-204ENST00000617024 RBM17Q96I25 401 aaKnown RBP20.6■□□□□ 0.89
SPTSSB-204ENST00000617024 PIM2Q9P1W9 311 aa20.6■□□□□ 0.89
SPTSSB-204ENST00000617024 ANKRD31Q8N7Z5 1873 aa20.6■□□□□ 0.89
SPTSSB-204ENST00000617024 GNAI3P08754 354 aa20.59■□□□□ 0.89
SPTSSB-204ENST00000617024 UBTFL1P0CB47 393 aaPredicted RBP20.59■□□□□ 0.89
SPTSSB-204ENST00000617024 ALDH1B1P30837 517 aa20.59■□□□□ 0.89
SPTSSB-204ENST00000617024 CRY2Q49AN0 593 aa20.59■□□□□ 0.89
SPTSSB-204ENST00000617024 RRAGCQ9HB90 399 aa20.59■□□□□ 0.89
SPTSSB-204ENST00000617024 RNF181Q9P0P0 153 aa20.59■□□□□ 0.89
SPTSSB-204ENST00000617024 SUPT16HQ9Y5B9 1047 aaKnown RBP20.59■□□□□ 0.89
SPTSSB-204ENST00000617024 CAPN15O75808 1086 aa20.58■□□□□ 0.89
SPTSSB-204ENST00000617024 CTSWP56202 376 aa20.58■□□□□ 0.89
SPTSSB-204ENST00000617024 CCDC152Q4G0S7 254 aa20.58■□□□□ 0.89
SPTSSB-204ENST00000617024 CNKSR1Q969H4 720 aa20.58■□□□□ 0.89
SPTSSB-204ENST00000617024 SUCLG2Q96I99 432 aa20.58■□□□□ 0.89
SPTSSB-204ENST00000617024 HOXA10P31260 410 aaPredicted RBP20.57■□□□□ 0.88
SPTSSB-204ENST00000617024 FOXO4P98177 505 aa20.57■□□□□ 0.88
SPTSSB-204ENST00000617024 DALRD3Q5D0E6 543 aaKnown RBP20.57■□□□□ 0.88
SPTSSB-204ENST00000617024 C20orf194Q5TEA3 1177 aa20.57■□□□□ 0.88
SPTSSB-204ENST00000617024 DDX46Q7L014 1031 aaKnown RBP20.57■□□□□ 0.88
SPTSSB-204ENST00000617024 TTLL6Q8N841 843 aa20.57■□□□□ 0.88
SPTSSB-204ENST00000617024 TTLL11Q8NHH1 800 aa20.57■□□□□ 0.88
SPTSSB-204ENST00000617024 MEIS3Q99687 375 aa20.57■□□□□ 0.88
SPTSSB-204ENST00000617024 COG6Q9Y2V7 657 aa20.57■□□□□ 0.88
SPTSSB-204ENST00000617024 CSF1RP07333 972 aa20.56■□□□□ 0.88
SPTSSB-204ENST00000617024 MVPQ14764 893 aaKnown RBP20.56■□□□□ 0.88
SPTSSB-204ENST00000617024 CRAMP1Q96RY5 1269 aa20.56■□□□□ 0.88
SPTSSB-204ENST00000617024 DDX60Q8IY21 1712 aaKnown RBP20.56■□□□□ 0.88
SPTSSB-204ENST00000617024 KDM2BQ8NHM5 1336 aa20.55■□□□□ 0.88
SPTSSB-204ENST00000617024 ZBTB7BO15156 539 aaPredicted RBP20.55■□□□□ 0.88
SPTSSB-204ENST00000617024 EPHA10Q5JZY3 1008 aa20.55■□□□□ 0.88
SPTSSB-204ENST00000617024 CCDC85AQ96PX6 553 aaPredicted RBP20.55■□□□□ 0.88
SPTSSB-204ENST00000617024 CHMP4BQ9H444 224 aaKnown RBP20.55■□□□□ 0.88
SPTSSB-204ENST00000617024 DDX19BQ9UMR2 479 aa20.55■□□□□ 0.88
SPTSSB-204ENST00000617024 CCDC88AQ3V6T2 1871 aa20.54■□□□□ 0.88
SPTSSB-204ENST00000617024 LMBR1LQ6UX01 489 aa20.54■□□□□ 0.88
SPTSSB-204ENST00000617024 KAZALD1Q96I82 304 aa20.54■□□□□ 0.88
SPTSSB-204ENST00000617024 GNAI2P04899 355 aa20.53■□□□□ 0.88
SPTSSB-204ENST00000617024 PRELPP51888 382 aa20.53■□□□□ 0.88
SPTSSB-204ENST00000617024 TNS4Q8IZW8 715 aa20.53■□□□□ 0.88
SPTSSB-204ENST00000617024 BICC1Q9H694 974 aaKnown RBP20.53■□□□□ 0.88
SPTSSB-204ENST00000617024 CHMP3Q9Y3E7 222 aa20.53■□□□□ 0.88
SPTSSB-204ENST00000617024 DLEC1Q9Y238 1755 aa20.52■□□□□ 0.88
SPTSSB-204ENST00000617024 BBOX1O75936 387 aa20.52■□□□□ 0.88
SPTSSB-204ENST00000617024 RASSF7Q02833 373 aa20.52■□□□□ 0.88
SPTSSB-204ENST00000617024 GREM2Q9H772 168 aa20.52■□□□□ 0.88
SPTSSB-204ENST00000617024 LRRFIP2Q9Y608 721 aaKnown RBP20.52■□□□□ 0.88
SPTSSB-204ENST00000617024 LAMB2P55268 1798 aa20.51■□□□□ 0.87
SPTSSB-204ENST00000617024 GRAPQ13588 217 aa20.51■□□□□ 0.87
SPTSSB-204ENST00000617024 GRAPLQ8TC17 118 aaPredicted RBP20.51■□□□□ 0.87
SPTSSB-204ENST00000617024 SEC31BQ9NQW1 1179 aa20.51■□□□□ 0.87
SPTSSB-204ENST00000617024 TIAM2Q8IVF5 1701 aa20.5■□□□□ 0.87
SPTSSB-204ENST00000617024 ITGA6P23229 1130 aa20.5■□□□□ 0.87
SPTSSB-204ENST00000617024 RPS8P62241 208 aaKnown RBP20.5■□□□□ 0.87
SPTSSB-204ENST00000617024 IFIT5Q13325 482 aaKnown RBP20.5■□□□□ 0.87
SPTSSB-204ENST00000617024 RABL6Q3YEC7 729 aaPredicted RBP20.5■□□□□ 0.87
SPTSSB-204ENST00000617024 PRPF40BQ6NWY9 871 aaKnown RBP20.5■□□□□ 0.87
SPTSSB-204ENST00000617024 ANKRD44Q8N8A2 993 aa20.5■□□□□ 0.87
SPTSSB-204ENST00000617024 SMC1BQ8NDV3 1235 aa20.5■□□□□ 0.87
SPTSSB-204ENST00000617024 CDC5LQ99459 802 aaKnown RBP20.5■□□□□ 0.87
SPTSSB-204ENST00000617024 MYH3P11055 1940 aa20.5■□□□□ 0.87
SPTSSB-204ENST00000617024 COL11A2P13942 1736 aaPredicted RBP20.5■□□□□ 0.87
SPTSSB-204ENST00000617024 RTL9Q8NET4 1388 aa20.49■□□□□ 0.87
SPTSSB-204ENST00000617024 ANKRD18BA2A2Z9 1011 aa20.49■□□□□ 0.87
SPTSSB-204ENST00000617024 CCDC57Q2TAC2 916 aa20.49■□□□□ 0.87
SPTSSB-204ENST00000617024 FAM161AQ3B820 660 aa20.48■□□□□ 0.87
SPTSSB-204ENST00000617024 ANKRD18AQ8IVF6 992 aa20.48■□□□□ 0.87
SPTSSB-204ENST00000617024 CELF1Q92879 486 aaKnown RBP20.48■□□□□ 0.87
SPTSSB-204ENST00000617024 TMX4Q9H1E5 349 aaPredicted RBP20.48■□□□□ 0.87
SPTSSB-204ENST00000617024 ZNF219Q9P2Y4 722 aaPredicted RBP20.48■□□□□ 0.87
SPTSSB-204ENST00000617024 PPEF1O14829 653 aaPredicted RBP20.47■□□□□ 0.87
SPTSSB-204ENST00000617024 C21orf2O43822 256 aa20.47■□□□□ 0.87
SPTSSB-204ENST00000617024 TMC4Q7Z404 712 aa20.47■□□□□ 0.87
SPTSSB-204ENST00000617024 ZBTB40Q9NUA8 1239 aa20.47■□□□□ 0.87
SPTSSB-204ENST00000617024 HSPA1AP0DMV8 641 aaKnown RBP20.46■□□□□ 0.87
SPTSSB-204ENST00000617024 HSPA1BP0DMV9 641 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms