RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 RAB11FIP4Q86YS3 637 aa15.51■□□□□ 0.07
PPP4R3B-206ENST00000616407 EAF2Q96CJ1 260 aaPredicted RBP15.51■□□□□ 0.07
PPP4R3B-206ENST00000616407 ZNF594Q96JF6 807 aaPredicted RBP15.51■□□□□ 0.07
PPP4R3B-206ENST00000616407 UBAC1Q9BSL1 405 aa15.51■□□□□ 0.07
PPP4R3B-206ENST00000616407 OSBPL3Q9H4L5 887 aa15.51■□□□□ 0.07
PPP4R3B-206ENST00000616407 AXIN2Q9Y2T1 843 aa15.51■□□□□ 0.07
PPP4R3B-206ENST00000616407 MINDY4BA8MYZ0 360 aa15.51■□□□□ 0.07
PPP4R3B-206ENST00000616407 KDRP35968 1356 aa15.51■□□□□ 0.07
PPP4R3B-206ENST00000616407 USP31Q70CQ4 1352 aa15.51■□□□□ 0.07
PPP4R3B-206ENST00000616407 RAD50Q92878 1312 aa15.51■□□□□ 0.07
PPP4R3B-206ENST00000616407 CDKL5O76039 1030 aa15.5■□□□□ 0.07
PPP4R3B-206ENST00000616407 DDB1Q16531 1140 aa15.5■□□□□ 0.07
PPP4R3B-206ENST00000616407 ATP6V1AP38606 617 aa15.5■□□□□ 0.07
PPP4R3B-206ENST00000616407 Q6ZUG5 572 aa15.5■□□□□ 0.07
PPP4R3B-206ENST00000616407 JMYQ8N9B5 988 aa15.5■□□□□ 0.07
PPP4R3B-206ENST00000616407 GOLGA8BA8MQT2 603 aa15.5■□□□□ 0.07
PPP4R3B-206ENST00000616407 UBE2HP62256 183 aa15.5■□□□□ 0.07
PPP4R3B-206ENST00000616407 VPS53Q5VIR6 699 aa15.5■□□□□ 0.07
PPP4R3B-206ENST00000616407 RUFY3Q7L099 469 aa15.5■□□□□ 0.07
PPP4R3B-206ENST00000616407 DZIP3Q86Y13 1208 aaKnown RBP15.5■□□□□ 0.07
PPP4R3B-206ENST00000616407 EDC3Q96F86 508 aaKnown RBP15.5■□□□□ 0.07
PPP4R3B-206ENST00000616407 C8orf76Q96K31 380 aa15.5■□□□□ 0.07
PPP4R3B-206ENST00000616407 BRMS1Q9HCU9 246 aa15.5■□□□□ 0.07
PPP4R3B-206ENST00000616407 HSPA4P34932 840 aa15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 DNAJC10Q8IXB1 793 aa15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 TMEM131LA2VDJ0 1609 aa15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 EYA2O00167 538 aa15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 SLC3A2P08195 630 aaKnown RBP15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 CCDC129Q6ZRS4 1044 aa15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 CKAP2LQ8IYA6 745 aa15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 CCDC82Q8N4S0 544 aa15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 CCDC191Q8NCU4 936 aa15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 HELBQ8NG08 1087 aaPredicted RBP15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 STAP2Q9UGK3 403 aa15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 DIP2BQ9P265 1576 aa15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 DNM1Q05193 864 aaKnown RBP15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 HSP90AA2PQ14568 343 aaPredicted RBP15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 ZSCAN30Q86W11 494 aa15.49■□□□□ 0.07
PPP4R3B-206ENST00000616407 F13A1P00488 732 aa15.48■□□□□ 0.07
PPP4R3B-206ENST00000616407 CAVIN4Q5BKX8 364 aa15.48■□□□□ 0.07
PPP4R3B-206ENST00000616407 IRS4O14654 1257 aaPredicted RBP15.48■□□□□ 0.07
PPP4R3B-206ENST00000616407 ZPR1O75312 459 aa15.48■□□□□ 0.07
PPP4R3B-206ENST00000616407 SYT1P21579 422 aa15.48■□□□□ 0.07
PPP4R3B-206ENST00000616407 TTF1Q15361 905 aaPredicted RBP15.48■□□□□ 0.07
PPP4R3B-206ENST00000616407 ANTXR1Q9H6X2 564 aa15.48■□□□□ 0.07
PPP4R3B-206ENST00000616407 A0A1B0GUL7 405 aa15.48■□□□□ 0.07
PPP4R3B-206ENST00000616407 TTLL7Q6ZT98 887 aa15.48■□□□□ 0.07
PPP4R3B-206ENST00000616407 FAM13BQ9NYF5 915 aa15.48■□□□□ 0.07
PPP4R3B-206ENST00000616407 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.48■□□□□ 0.073e-9■■■■□ 20.3
PPP4R3B-206ENST00000616407 ZFYP08048 801 aaPredicted RBP15.47■□□□□ 0.07
PPP4R3B-206ENST00000616407 SETD1BQ9UPS6 1966 aaKnown RBP15.47■□□□□ 0.07
PPP4R3B-206ENST00000616407 CDC42BPGQ6DT37 1551 aa15.47■□□□□ 0.07
PPP4R3B-206ENST00000616407 CHST3Q7LGC8 479 aa15.47■□□□□ 0.07
PPP4R3B-206ENST00000616407 SLC9C2Q5TAH2 1124 aa15.47■□□□□ 0.07
PPP4R3B-206ENST00000616407 OLFM4Q6UX06 510 aa15.47■□□□□ 0.07
PPP4R3B-206ENST00000616407 USP25Q9UHP3 1055 aa15.47■□□□□ 0.07
PPP4R3B-206ENST00000616407 OVOS2A0A0J9YW53 1432 aa15.47■□□□□ 0.07
PPP4R3B-206ENST00000616407 OVOS2Q6IE36 1432 aa15.47■□□□□ 0.07
PPP4R3B-206ENST00000616407 CD163L1Q9NR16 1453 aa15.47■□□□□ 0.07
PPP4R3B-206ENST00000616407 TPM3P06753 285 aa15.47■□□□□ 0.07
PPP4R3B-206ENST00000616407 PRIM1P49642 420 aaKnown RBP15.47■□□□□ 0.07
PPP4R3B-206ENST00000616407 LRSAM1Q6UWE0 723 aa15.47■□□□□ 0.07
PPP4R3B-206ENST00000616407 IQSEC3Q9UPP2 1182 aaPredicted RBP15.46■□□□□ 0.07
PPP4R3B-206ENST00000616407 SLC27A2O14975 620 aa15.46■□□□□ 0.07
PPP4R3B-206ENST00000616407 RNF113AO15541 343 aaKnown RBP15.46■□□□□ 0.07
PPP4R3B-206ENST00000616407 NCOA7Q8NI08 942 aa15.46■□□□□ 0.07
PPP4R3B-206ENST00000616407 ERVV-2B6SEH9 535 aa15.46■□□□□ 0.07
PPP4R3B-206ENST00000616407 GIMAP6Q6P9H5 292 aa15.46■□□□□ 0.07
PPP4R3B-206ENST00000616407 IFIT3O14879 490 aaKnown RBP15.45■□□□□ 0.06
PPP4R3B-206ENST00000616407 PKP1Q13835 747 aa15.45■□□□□ 0.06
PPP4R3B-206ENST00000616407 ORC3Q9UBD5 711 aaPredicted RBP15.45■□□□□ 0.06
PPP4R3B-206ENST00000616407 NIP7Q9Y221 180 aaKnown RBP eCLIP15.45■□□□□ 0.06
PPP4R3B-206ENST00000616407 SMC2O95347 1197 aa15.45■□□□□ 0.06
PPP4R3B-206ENST00000616407 UQCRFS1P1P0C7P4 283 aa15.45■□□□□ 0.06
PPP4R3B-206ENST00000616407 CDC5LQ99459 802 aaKnown RBP15.45■□□□□ 0.06
PPP4R3B-206ENST00000616407 MCM5P33992 734 aa15.45■□□□□ 0.06
PPP4R3B-206ENST00000616407 CCDC144CPQ8IYA2 1237 aa15.45■□□□□ 0.06
PPP4R3B-206ENST00000616407 PTPRUQ92729 1446 aa15.45■□□□□ 0.06
PPP4R3B-206ENST00000616407 HCLS1P14317 486 aaPredicted RBP15.45■□□□□ 0.06
PPP4R3B-206ENST00000616407 PTH1RQ03431 593 aa15.45■□□□□ 0.06
PPP4R3B-206ENST00000616407 KLF18A0A0U1RQI7 1052 aa15.44■□□□□ 0.06
PPP4R3B-206ENST00000616407 CCDC152Q4G0S7 254 aa15.44■□□□□ 0.06
PPP4R3B-206ENST00000616407 MICU3Q86XE3 530 aa15.44■□□□□ 0.06
PPP4R3B-206ENST00000616407 SPATA31D1Q6ZQQ2 1576 aa15.44■□□□□ 0.06
PPP4R3B-206ENST00000616407 PIBF1Q8WXW3 757 aa15.44■□□□□ 0.06
PPP4R3B-206ENST00000616407 TRIM34Q9BYJ4 488 aa15.44■□□□□ 0.06
PPP4R3B-206ENST00000616407 TECPR2O15040 1411 aa15.44■□□□□ 0.06
PPP4R3B-206ENST00000616407 CRB1P82279 1406 aa15.44■□□□□ 0.06
PPP4R3B-206ENST00000616407 POLR3DP05423 398 aaPredicted RBP15.43■□□□□ 0.06
PPP4R3B-206ENST00000616407 SLC12A7Q9Y666 1083 aa15.43■□□□□ 0.06
PPP4R3B-206ENST00000616407 ADGRL3Q9HAR2 1447 aa15.43■□□□□ 0.06
PPP4R3B-206ENST00000616407 APOBRQ0VD83 1088 aa15.43■□□□□ 0.06
PPP4R3B-206ENST00000616407 HOMER1Q86YM7 354 aa15.43■□□□□ 0.06
PPP4R3B-206ENST00000616407 DHX32Q7L7V1 743 aaKnown RBP15.43■□□□□ 0.06
PPP4R3B-206ENST00000616407 KBTBD3Q8NAB2 608 aa15.43■□□□□ 0.06
PPP4R3B-206ENST00000616407 ARHGEF28Q8N1W1 1705 aaKnown RBP15.43■□□□□ 0.06
PPP4R3B-206ENST00000616407 GOLGA8AA7E2F4 631 aa15.42■□□□□ 0.06
PPP4R3B-206ENST00000616407 ATP5JP18859 108 aa15.42■□□□□ 0.06
PPP4R3B-206ENST00000616407 TMEM67Q5HYA8 995 aa15.42■□□□□ 0.06
PPP4R3B-206ENST00000616407 CEP57L1Q8IYX8 460 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms