RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 CFAP100Q494V2 611 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 BMP2KLQ5H9B9 411 aa10.59□□□□□ -0.71
COL12A1-211ENST00000615798 CSB-PGBD3P0DP91 1061 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 ZNF518AQ6AHZ1 1483 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 SLC8A1P32418 973 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 PCYT1AP49585 367 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 USP37Q86T82 979 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 CTCFLQ8NI51 663 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-211ENST00000615798 FAM76AQ8TAV0 307 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 EXOSC9Q06265 439 aaKnown RBP10.58□□□□□ -0.72
COL12A1-211ENST00000615798 HVCN1Q96D96 273 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 RASAL2Q9UJF2 1139 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 ZFYVE9O95405 1425 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 TRIM21P19474 475 aaKnown RBP10.58□□□□□ -0.72
COL12A1-211ENST00000615798 PRKAR2BP31323 418 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 RNF10Q8N5U6 811 aaKnown RBP10.58□□□□□ -0.72
COL12A1-211ENST00000615798 SYF2O95926 243 aaKnown RBP10.58□□□□□ -0.72
COL12A1-211ENST00000615798 HDAC1Q13547 482 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-211ENST00000615798 ARFGAP2Q8N6H7 521 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 IWS1Q96ST2 819 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 PTPRCP08575 1304 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 ARHGEF9O43307 516 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 IRX4P78413 519 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 CCDC183Q5T5S1 534 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 KDM5BQ9UGL1 1544 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 RARSP54136 660 aaKnown RBP10.58□□□□□ -0.72
COL12A1-211ENST00000615798 NFE2L2Q16236 605 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 INF2Q27J81 1249 aa10.58□□□□□ -0.72
COL12A1-211ENST00000615798 DUSP27Q5VZP5 1158 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 CXorf38Q8TB03 319 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 DACT3Q96B18 629 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-211ENST00000615798 IQCGQ9H095 443 aaKnown RBP10.57□□□□□ -0.72
COL12A1-211ENST00000615798 DIABLOQ9NR28 239 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 SOS1Q07889 1333 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-211ENST00000615798 VPS18Q9P253 973 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 NEDD9Q14511 834 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 FANCAO15360 1455 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 INPP1P49441 399 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 KRT32Q14532 448 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 TUBBP07437 444 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 SLU7O95391 586 aaKnown RBP10.57□□□□□ -0.72
COL12A1-211ENST00000615798 POTEB3A0JP26 581 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 POTEBQ6S5H4 581 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 HSP90AA5PQ58FG0 334 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 TMEM57Q8N5G2 664 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 GOLGA1Q92805 767 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 VEZTQ9HBM0 779 aa10.57□□□□□ -0.72
COL12A1-211ENST00000615798 SESN3P58005 492 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 Q9H521 79 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 SOX12O15370 315 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 CREB3O43889 395 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 CCDC77Q9BR77 488 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 TTC21BQ7Z4L5 1316 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 RAB11FIP3O75154 756 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 FGFR1OPO95684 399 aaKnown RBP10.56□□□□□ -0.72
COL12A1-211ENST00000615798 RAB3IPQ96QF0 476 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-211ENST00000615798 TUBB4AP04350 444 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 TOP1P11387 765 aaKnown RBP10.56□□□□□ -0.72
COL12A1-211ENST00000615798 TMCO4Q5TGY1 634 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 CCDC196A0A1B0GTZ2 297 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 ME1P48163 572 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 HDXQ7Z353 690 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 RSPH3Q86UC2 560 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 RNF123Q5XPI4 1314 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 MAN1A2O60476 641 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 SKILP12757 684 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 PPP2R5AQ15172 486 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 CCDC150Q8NCX0 1101 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 ABTB1Q969K4 478 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-211ENST00000615798 FAN1Q9Y2M0 1017 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 COMMD10Q9Y6G5 202 aa10.56□□□□□ -0.72
COL12A1-211ENST00000615798 LRRD1A4D1F6 860 aa10.55□□□□□ -0.72
COL12A1-211ENST00000615798 LONP1P36776 959 aaKnown RBP10.55□□□□□ -0.72
COL12A1-211ENST00000615798 PPP1R12AO14974 1030 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-211ENST00000615798 ATP10BO94823 1461 aa10.55□□□□□ -0.72
COL12A1-211ENST00000615798 TRIM63Q969Q1 353 aa10.55□□□□□ -0.72
COL12A1-211ENST00000615798 CNGA1P29973 690 aa10.55□□□□□ -0.72
COL12A1-211ENST00000615798 ODF2LQ9ULJ1 636 aa10.55□□□□□ -0.72
COL12A1-211ENST00000615798 NOB1Q9ULX3 412 aaKnown RBP10.55□□□□□ -0.72
COL12A1-211ENST00000615798 GGNBP2Q9H3C7 697 aa10.55□□□□□ -0.72
COL12A1-211ENST00000615798 SMIM24O75264 130 aa10.55□□□□□ -0.72
COL12A1-211ENST00000615798 C11orf95C9JLR9 678 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-211ENST00000615798 SART3Q15020 963 aaKnown RBP10.55□□□□□ -0.72
COL12A1-211ENST00000615798 FKBP15Q5T1M5 1219 aa10.55□□□□□ -0.72
COL12A1-211ENST00000615798 PZPP20742 1482 aa10.55□□□□□ -0.72
COL12A1-211ENST00000615798 TMPOP42166 694 aaKnown RBP10.54□□□□□ -0.72
COL12A1-211ENST00000615798 PLXNC1O60486 1568 aa10.54□□□□□ -0.72
COL12A1-211ENST00000615798 SYCP2Q9BX26 1530 aa10.54□□□□□ -0.72
COL12A1-211ENST00000615798 PEX19P40855 299 aa10.54□□□□□ -0.72
COL12A1-211ENST00000615798 PABPN1LA6NDY0 278 aaKnown RBP10.54□□□□□ -0.72
COL12A1-211ENST00000615798 SSBP05455 408 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL12A1-211ENST00000615798 CLCN1P35523 988 aa10.54□□□□□ -0.72
COL12A1-211ENST00000615798 TMED1Q13445 227 aa10.54□□□□□ -0.72
COL12A1-211ENST00000615798 C14orf93Q9H972 538 aaKnown RBP10.54□□□□□ -0.72
COL12A1-211ENST00000615798 ABCC10Q5T3U5 1492 aa10.54□□□□□ -0.72
COL12A1-211ENST00000615798 BLMP54132 1417 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-211ENST00000615798 KIF1CO43896 1103 aaKnown RBP10.54□□□□□ -0.72
COL12A1-211ENST00000615798 ANKRD24Q8TF21 1146 aa10.54□□□□□ -0.72
COL12A1-211ENST00000615798 BCAR3O75815 825 aa10.54□□□□□ -0.72
COL12A1-211ENST00000615798 PPP1R21Q6ZMI0 780 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms