RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 ZNF521Q96K83 1311 aa11.08□□□□□ -0.64
CCL3-205ENST00000613928 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.07□□□□□ -0.64
CCL3-205ENST00000613928 ARID5BQ14865 1188 aa11.07□□□□□ -0.64
CCL3-205ENST00000613928 MRGPRX2Q96LB1 330 aa11.07□□□□□ -0.64
CCL3-205ENST00000613928 C8orf37Q96NL8 207 aa11.07□□□□□ -0.64
CCL3-205ENST00000613928 C19orf44Q9H6X5 657 aa11.07□□□□□ -0.64
CCL3-205ENST00000613928 SRCAPQ6ZRS2 3230 aa11.07□□□□□ -0.64
CCL3-205ENST00000613928 SSH2Q76I76 1423 aa11.07□□□□□ -0.64
CCL3-205ENST00000613928 ANKARQ7Z5J8 1434 aa11.07□□□□□ -0.64
CCL3-205ENST00000613928 TTC21BQ7Z4L5 1316 aa11.07□□□□□ -0.64
CCL3-205ENST00000613928 PNPLA6Q8IY17 1366 aa11.06□□□□□ -0.64
CCL3-205ENST00000613928 RGPD8O14715 1765 aaPredicted RBP11.06□□□□□ -0.64
CCL3-205ENST00000613928 APAF1O14727 1248 aa11.06□□□□□ -0.64
CCL3-205ENST00000613928 SIAH2O43255 324 aa11.06□□□□□ -0.64
CCL3-205ENST00000613928 FBLN1P23142 703 aa11.06□□□□□ -0.64
CCL3-205ENST00000613928 POLKQ9UBT6 870 aa11.06□□□□□ -0.64
CCL3-205ENST00000613928 TLL2Q9Y6L7 1015 aa11.06□□□□□ -0.64
CCL3-205ENST00000613928 USP6P35125 1406 aa11.06□□□□□ -0.64
CCL3-205ENST00000613928 NALCNQ8IZF0 1738 aa11.06□□□□□ -0.64
CCL3-205ENST00000613928 RNF123Q5XPI4 1314 aa11.06□□□□□ -0.64
CCL3-205ENST00000613928 NCOA4Q13772 614 aa11.05□□□□□ -0.64
CCL3-205ENST00000613928 EML3Q32P44 896 aa11.05□□□□□ -0.64
CCL3-205ENST00000613928 TRAF7Q6Q0C0 670 aa11.05□□□□□ -0.64
CCL3-205ENST00000613928 PMFBP1Q8TBY8 1022 aa11.05□□□□□ -0.64
CCL3-205ENST00000613928 CCDC85AQ96PX6 553 aaPredicted RBP11.05□□□□□ -0.64
CCL3-205ENST00000613928 VRTNQ9H8Y1 702 aa11.05□□□□□ -0.64
CCL3-205ENST00000613928 AATKQ6ZMQ8 1374 aa11.04□□□□□ -0.64
CCL3-205ENST00000613928 ADH1CP00326 375 aa11.04□□□□□ -0.64
CCL3-205ENST00000613928 FSHRP23945 695 aa11.04□□□□□ -0.64
CCL3-205ENST00000613928 RBM6P78332 1123 aaKnown RBP11.04□□□□□ -0.64
CCL3-205ENST00000613928 IRX6P78412 446 aaPredicted RBP11.04□□□□□ -0.64
CCL3-205ENST00000613928 INTS6LQ5JSJ4 861 aaKnown RBP11.04□□□□□ -0.64
CCL3-205ENST00000613928 DEPDC4Q8N2C3 294 aa11.04□□□□□ -0.64
CCL3-205ENST00000613928 RUNDC1Q96C34 613 aa11.04□□□□□ -0.64
CCL3-205ENST00000613928 COG3Q96JB2 828 aa11.04□□□□□ -0.64
CCL3-205ENST00000613928 QTRT2Q9H974 415 aaKnown RBP11.04□□□□□ -0.64
CCL3-205ENST00000613928 OVOS2A0A0J9YW53 1432 aa11.03□□□□□ -0.64
CCL3-205ENST00000613928 MST1RQ04912 1400 aa11.03□□□□□ -0.64
CCL3-205ENST00000613928 OVOS2Q6IE36 1432 aa11.03□□□□□ -0.64
CCL3-205ENST00000613928 ADGRL3Q9HAR2 1447 aa11.03□□□□□ -0.64
CCL3-205ENST00000613928 DHX9Q08211 1270 aaKnown RBP11.03□□□□□ -0.64
CCL3-205ENST00000613928 DDX17Q92841 729 aaKnown RBP11.03□□□□□ -0.64
CCL3-205ENST00000613928 PCDHB11Q9Y5F2 797 aa11.03□□□□□ -0.64
CCL3-205ENST00000613928 DCCP43146 1447 aa11.02□□□□□ -0.64
CCL3-205ENST00000613928 ATP5J2-PTCD1G3V325 749 aa11.02□□□□□ -0.65
CCL3-205ENST00000613928 DIAPH1O60610 1272 aaKnown RBP11.02□□□□□ -0.65
CCL3-205ENST00000613928 U2AF1L5P0DN76 240 aaPredicted RBP11.02□□□□□ -0.65
CCL3-205ENST00000613928 RAB15P59190 212 aa11.02□□□□□ -0.65
CCL3-205ENST00000613928 U2AF1Q01081 240 aaKnown RBP eCLIP11.02□□□□□ -0.65
CCL3-205ENST00000613928 FOXC1Q12948 553 aa11.02□□□□□ -0.65
CCL3-205ENST00000613928 NR5A1Q13285 461 aa11.02□□□□□ -0.65
CCL3-205ENST00000613928 NGEFQ8N5V2 710 aa11.02□□□□□ -0.65
CCL3-205ENST00000613928 EMILIN1Q9Y6C2 1016 aa11.02□□□□□ -0.65
CCL3-205ENST00000613928 MAP2P11137 1827 aaKnown RBP11.02□□□□□ -0.65
CCL3-205ENST00000613928 GRM5P41594 1212 aa11.01□□□□□ -0.65
CCL3-205ENST00000613928 SLFN5Q08AF3 891 aa11.01□□□□□ -0.65
CCL3-205ENST00000613928 OXLD1Q5BKU9 147 aa11.01□□□□□ -0.65
CCL3-205ENST00000613928 TRMT2AQ8IZ69 625 aaKnown RBP11.01□□□□□ -0.65
CCL3-205ENST00000613928 TCP11L2Q8N4U5 519 aa11.01□□□□□ -0.65
CCL3-205ENST00000613928 NGDNQ8NEJ9 315 aaKnown RBP11.01□□□□□ -0.65
CCL3-205ENST00000613928 PKD2L1Q9P0L9 805 aa11.01□□□□□ -0.65
CCL3-205ENST00000613928 MKRN1Q9UHC7 482 aaKnown RBP11.01□□□□□ -0.65
CCL3-205ENST00000613928 NOD1Q9Y239 953 aa11.01□□□□□ -0.65
CCL3-205ENST00000613928 TTC21AQ8NDW8 1320 aa11.01□□□□□ -0.65
CCL3-205ENST00000613928 USP31Q70CQ4 1352 aa11.01□□□□□ -0.65
CCL3-205ENST00000613928 U2SURPO15042 1029 aaKnown RBP11□□□□□ -0.65
CCL3-205ENST00000613928 RGS20O76081 388 aa11□□□□□ -0.65
CCL3-205ENST00000613928 ATG7O95352 703 aa11□□□□□ -0.65
CCL3-205ENST00000613928 ADAMTS2O95450 1211 aa11□□□□□ -0.65
CCL3-205ENST00000613928 TSGA10IPQ3SY00 556 aa11□□□□□ -0.65
CCL3-205ENST00000613928 DUSP27Q5VZP5 1158 aa11□□□□□ -0.65
CCL3-205ENST00000613928 TRIM50Q86XT4 487 aa11□□□□□ -0.65
CCL3-205ENST00000613928 SNIP1Q8TAD8 396 aaKnown RBP11□□□□□ -0.65
CCL3-205ENST00000613928 LRRC59Q96AG4 307 aaKnown RBP11□□□□□ -0.65
CCL3-205ENST00000613928 PLEKHF1Q96S99 279 aa11□□□□□ -0.65
CCL3-205ENST00000613928 ERVH48-1M5A8F1 160 aa10.99□□□□□ -0.65
CCL3-205ENST00000613928 IL13P35225 146 aa10.99□□□□□ -0.65
CCL3-205ENST00000613928 USP4Q13107 963 aa10.99□□□□□ -0.65
CCL3-205ENST00000613928 RRS1Q15050 365 aaKnown RBP10.99□□□□□ -0.65
CCL3-205ENST00000613928 ERICH6BQ5W0A0 696 aa10.99□□□□□ -0.65
CCL3-205ENST00000613928 CCDC116Q8IYX3 515 aa10.99□□□□□ -0.65
CCL3-205ENST00000613928 NGLY1Q96IV0 654 aa10.99□□□□□ -0.65
CCL3-205ENST00000613928 RCAN3Q9UKA8 241 aa10.99□□□□□ -0.65
CCL3-205ENST00000613928 RRP7AQ9Y3A4 280 aaKnown RBP10.99□□□□□ -0.65
CCL3-205ENST00000613928 PPM1GO15355 546 aaPredicted RBP10.98□□□□□ -0.65
CCL3-205ENST00000613928 ALDH1A1P00352 501 aa10.98□□□□□ -0.65
CCL3-205ENST00000613928 MYCP01106 439 aaPredicted RBP10.98□□□□□ -0.65
CCL3-205ENST00000613928 ATP1A2P50993 1020 aa10.98□□□□□ -0.65
CCL3-205ENST00000613928 PDE4CQ08493 712 aa10.98□□□□□ -0.65
CCL3-205ENST00000613928 WASF2Q9Y6W5 498 aa10.98□□□□□ -0.65
CCL3-205ENST00000613928 PIK3C2AO00443 1686 aa10.98□□□□□ -0.65
CCL3-205ENST00000613928 FAM196BA6NMK8 535 aa10.97□□□□□ -0.65
CCL3-205ENST00000613928 GDF9O60383 454 aa10.97□□□□□ -0.65
CCL3-205ENST00000613928 CSB-PGBD3P0DP91 1061 aa10.97□□□□□ -0.65
CCL3-205ENST00000613928 CCDC27Q2M243 656 aa10.97□□□□□ -0.65
CCL3-205ENST00000613928 LARP1Q6PKG0 1096 aaKnown RBP10.97□□□□□ -0.65
CCL3-205ENST00000613928 RETREG2Q8NC44 543 aa10.97□□□□□ -0.65
CCL3-205ENST00000613928 CDCA7Q9BWT1 371 aaPredicted RBP10.97□□□□□ -0.65
CCL3-205ENST00000613928 PEAK1Q9H792 1746 aa10.96□□□□□ -0.65
CCL3-205ENST00000613928 MARF1Q9Y4F3 1742 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms