RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 SNRKQ9NRH2 765 aa16.59■□□□□ 0.25
HOXA3-207ENST00000612286 RNF20Q5VTR2 975 aa16.59■□□□□ 0.25
HOXA3-207ENST00000612286 CCDC73Q6ZRK6 1079 aa16.59■□□□□ 0.25
HOXA3-207ENST00000612286 FSIP1Q8NA03 581 aa16.59■□□□□ 0.25
HOXA3-207ENST00000612286 KINO60870 393 aaKnown RBP16.58■□□□□ 0.25
HOXA3-207ENST00000612286 PSMA5P28066 241 aa16.58■□□□□ 0.25
HOXA3-207ENST00000612286 EVI5LQ96CN4 794 aa16.58■□□□□ 0.25
HOXA3-207ENST00000612286 MYD88Q99836 296 aa16.58■□□□□ 0.25
HOXA3-207ENST00000612286 TOB2Q14106 344 aaPredicted RBP16.58■□□□□ 0.24
HOXA3-207ENST00000612286 EIF4A1P60842 406 aaKnown RBP16.58■□□□□ 0.24
HOXA3-207ENST00000612286 SCAND2PQ9GZW5 306 aaPredicted RBP16.58■□□□□ 0.24
HOXA3-207ENST00000612286 PDCP20941 246 aa16.57■□□□□ 0.24
HOXA3-207ENST00000612286 TMC6Q7Z403 805 aa16.57■□□□□ 0.24
HOXA3-207ENST00000612286 BBXQ8WY36 941 aaPredicted RBP16.57■□□□□ 0.24
HOXA3-207ENST00000612286 FLT4P35916 1363 aa16.57■□□□□ 0.24
HOXA3-207ENST00000612286 ARAP3Q8WWN8 1544 aa16.57■□□□□ 0.24
HOXA3-207ENST00000612286 ERCC6LQ2NKX8 1250 aa16.57■□□□□ 0.24
HOXA3-207ENST00000612286 HSP90AB4PQ58FF6 505 aa16.57■□□□□ 0.24
HOXA3-207ENST00000612286 SYT10Q6XYQ8 523 aa16.57■□□□□ 0.24
HOXA3-207ENST00000612286 ZSWIM4Q9H7M6 989 aa16.57■□□□□ 0.24
HOXA3-207ENST00000612286 RPS6KB1P23443 525 aa16.57■□□□□ 0.24
HOXA3-207ENST00000612286 LMOD1P29536 600 aaPredicted RBP16.57■□□□□ 0.24
HOXA3-207ENST00000612286 POLA2Q14181 598 aa16.57■□□□□ 0.24
HOXA3-207ENST00000612286 USP28Q96RU2 1077 aa16.57■□□□□ 0.24
HOXA3-207ENST00000612286 KIF20BQ96Q89 1820 aa16.56■□□□□ 0.24
HOXA3-207ENST00000612286 RXRAP19793 462 aa16.56■□□□□ 0.24
HOXA3-207ENST00000612286 GNL2Q13823 731 aaKnown RBP16.56■□□□□ 0.24
HOXA3-207ENST00000612286 GOLPH3LQ9H4A5 285 aa16.56■□□□□ 0.24
HOXA3-207ENST00000612286 CLSTN2Q9H4D0 955 aa16.56■□□□□ 0.24
HOXA3-207ENST00000612286 CEP170BQ9Y4F5 1589 aaPredicted RBP16.56■□□□□ 0.24
HOXA3-207ENST00000612286 C1orf141Q5JVX7 400 aa16.56■□□□□ 0.24
HOXA3-207ENST00000612286 EPHA10Q5JZY3 1008 aa16.56■□□□□ 0.24
HOXA3-207ENST00000612286 UBE3BQ7Z3V4 1068 aa16.56■□□□□ 0.24
HOXA3-207ENST00000612286 NEK1Q96PY6 1258 aa16.56■□□□□ 0.24
HOXA3-207ENST00000612286 MAP3K5Q99683 1374 aa16.56■□□□□ 0.24
HOXA3-207ENST00000612286 GOLIM4O00461 696 aa16.55■□□□□ 0.24
HOXA3-207ENST00000612286 CDK11BP21127 795 aaKnown RBP16.55■□□□□ 0.24
HOXA3-207ENST00000612286 SKIDA1Q1XH10 827 aa16.55■□□□□ 0.24
HOXA3-207ENST00000612286 NPHP3Q7Z494 1330 aa16.55■□□□□ 0.24
HOXA3-207ENST00000612286 TTLL5Q6EMB2 1281 aa16.55■□□□□ 0.24
HOXA3-207ENST00000612286 ATP2B1P20020 1258 aa16.55■□□□□ 0.24
HOXA3-207ENST00000612286 MARCKSP29966 332 aaPredicted RBP16.55■□□□□ 0.24
HOXA3-207ENST00000612286 TFCP2Q12800 502 aa16.55■□□□□ 0.24
HOXA3-207ENST00000612286 KMT5BQ4FZB7 885 aa16.55■□□□□ 0.24
HOXA3-207ENST00000612286 DBNDD2Q9BQY9 259 aa16.55■□□□□ 0.24
HOXA3-207ENST00000612286 SMTNL1A8MU46 457 aa16.54■□□□□ 0.24
HOXA3-207ENST00000612286 DDX19AQ9NUU7 478 aaKnown RBP16.54■□□□□ 0.24
HOXA3-207ENST00000612286 FBXO38Q6PIJ6 1188 aa16.54■□□□□ 0.24
HOXA3-207ENST00000612286 LRRC8AQ8IWT6 810 aa16.54■□□□□ 0.24
HOXA3-207ENST00000612286 GTF2F1P35269 517 aaKnown RBP eCLIP16.54■□□□□ 0.246e-10■■□□□ 13.4
HOXA3-207ENST00000612286 ZC3H6P61129 1189 aaKnown RBP16.54■□□□□ 0.24
HOXA3-207ENST00000612286 TIMM10P62072 90 aa16.54■□□□□ 0.24
HOXA3-207ENST00000612286 ESCO1Q5FWF5 840 aa16.54■□□□□ 0.24
HOXA3-207ENST00000612286 MAP4K1Q92918 833 aa16.54■□□□□ 0.24
HOXA3-207ENST00000612286 CTNNA3Q9UI47 895 aa16.54■□□□□ 0.24
HOXA3-207ENST00000612286 SSH2Q76I76 1423 aa16.53■□□□□ 0.24
HOXA3-207ENST00000612286 GRM8O00222 908 aa16.53■□□□□ 0.24
HOXA3-207ENST00000612286 HDGFP51858 240 aaKnown RBP16.53■□□□□ 0.24
HOXA3-207ENST00000612286 SCRN1Q12765 414 aa16.53■□□□□ 0.24
HOXA3-207ENST00000612286 IFNKQ9P0W0 207 aa16.53■□□□□ 0.24
HOXA3-207ENST00000612286 IGSF1Q8N6C5 1336 aa16.53■□□□□ 0.24
HOXA3-207ENST00000612286 CREBRFQ8IUR6 639 aa16.53■□□□□ 0.24
HOXA3-207ENST00000612286 PLCD3Q8N3E9 789 aa16.53■□□□□ 0.24
HOXA3-207ENST00000612286 ANKRD26Q9UPS8 1709 aa16.53■□□□□ 0.24
HOXA3-207ENST00000612286 PTPDC1A2A3K4 754 aa16.52■□□□□ 0.24
HOXA3-207ENST00000612286 TPM3P06753 285 aa16.52■□□□□ 0.24
HOXA3-207ENST00000612286 CYP21A2P08686 494 aa16.52■□□□□ 0.24
HOXA3-207ENST00000612286 FKBP4Q02790 459 aaKnown RBP eCLIP16.52■□□□□ 0.24
HOXA3-207ENST00000612286 PSME1Q06323 249 aa16.52■□□□□ 0.24
HOXA3-207ENST00000612286 UTP14CQ5TAP6 766 aaKnown RBP16.52■□□□□ 0.24
HOXA3-207ENST00000612286 PDILTQ8N807 584 aa16.52■□□□□ 0.24
HOXA3-207ENST00000612286 ANKRD7Q92527 254 aa16.52■□□□□ 0.24
HOXA3-207ENST00000612286 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.24
HOXA3-207ENST00000612286 A2ML1A8K2U0 1454 aa16.52■□□□□ 0.23
HOXA3-207ENST00000612286 COPS6Q7L5N1 327 aa16.51■□□□□ 0.23
HOXA3-207ENST00000612286 CCDC82Q8N4S0 544 aa16.51■□□□□ 0.23
HOXA3-207ENST00000612286 GTPBP4Q9BZE4 634 aaKnown RBP16.51■□□□□ 0.23
HOXA3-207ENST00000612286 XAGE3Q8WTP9 111 aa16.51■□□□□ 0.23
HOXA3-207ENST00000612286 OGFRQ9NZT2 677 aa16.51■□□□□ 0.23
HOXA3-207ENST00000612286 CDC42BPGQ6DT37 1551 aa16.51■□□□□ 0.23
HOXA3-207ENST00000612286 USP6P35125 1406 aa16.51■□□□□ 0.23
HOXA3-207ENST00000612286 STK38Q15208 465 aa16.51■□□□□ 0.23
HOXA3-207ENST00000612286 WASHC4Q2M389 1173 aa16.51■□□□□ 0.23
HOXA3-207ENST00000612286 DPCR1Q3MIW9 517 aa16.51■□□□□ 0.23
HOXA3-207ENST00000612286 SPECC1Q5M775 1068 aa16.51■□□□□ 0.23
HOXA3-207ENST00000612286 DNAI1Q9UI46 699 aa16.51■□□□□ 0.23
HOXA3-207ENST00000612286 CHMP4CQ96CF2 233 aa16.5■□□□□ 0.23
HOXA3-207ENST00000612286 TTC41PQ6P2S7 1318 aa16.5■□□□□ 0.23
HOXA3-207ENST00000612286 ADCY9O60503 1353 aa16.5■□□□□ 0.23
HOXA3-207ENST00000612286 TMEM131LA2VDJ0 1609 aa16.5■□□□□ 0.23
HOXA3-207ENST00000612286 URI1O94763 535 aaPredicted RBP16.5■□□□□ 0.23
HOXA3-207ENST00000612286 CCDC34Q96HJ3 373 aa16.5■□□□□ 0.23
HOXA3-207ENST00000612286 DBNLQ9UJU6 430 aaKnown RBP16.5■□□□□ 0.23
HOXA3-207ENST00000612286 EID1Q9Y6B2 187 aa16.5■□□□□ 0.23
HOXA3-207ENST00000612286 TAF5LO75529 589 aa16.49■□□□□ 0.23
HOXA3-207ENST00000612286 SEC31AO94979 1220 aaKnown RBP16.49■□□□□ 0.23
HOXA3-207ENST00000612286 PLA2G4DQ86XP0 818 aa16.49■□□□□ 0.23
HOXA3-207ENST00000612286 ZNF594Q96JF6 807 aaPredicted RBP16.49■□□□□ 0.23
HOXA3-207ENST00000612286 SBNO1A3KN83 1393 aa16.49■□□□□ 0.23
HOXA3-207ENST00000612286 GYS2P54840 703 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms