RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 PIBF1Q8WXW3 757 aa14.41□□□□□ -0.1
CDH1-212ENST00000611625 TMEM63CQ9P1W3 806 aa14.41□□□□□ -0.1
CDH1-212ENST00000611625 GPTP24298 496 aa14.41□□□□□ -0.1
CDH1-212ENST00000611625 METAP2P50579 478 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDH1-212ENST00000611625 HOXB7P09629 217 aa14.41□□□□□ -0.1
CDH1-212ENST00000611625 SKILP12757 684 aa14.41□□□□□ -0.1
CDH1-212ENST00000611625 ZFYP08048 801 aaPredicted RBP14.41□□□□□ -0.1
CDH1-212ENST00000611625 CCDC150Q8NCX0 1101 aa14.41□□□□□ -0.1
CDH1-212ENST00000611625 KCNG4Q8TDN1 519 aa14.41□□□□□ -0.1
CDH1-212ENST00000611625 IP6K1Q92551 441 aa14.41□□□□□ -0.1
CDH1-212ENST00000611625 BICC1Q9H694 974 aaKnown RBP14.41□□□□□ -0.1
CDH1-212ENST00000611625 FSD2A1L4K1 749 aa14.4□□□□□ -0.1
CDH1-212ENST00000611625 IL15P40933 162 aaPredicted RBP14.4□□□□□ -0.1
CDH1-212ENST00000611625 CHRNA2Q15822 529 aa14.4□□□□□ -0.1
CDH1-212ENST00000611625 ISM2Q6H9L7 571 aa14.4□□□□□ -0.1
CDH1-212ENST00000611625 HSPA4P34932 840 aa14.4□□□□□ -0.1
CDH1-212ENST00000611625 TTF1Q15361 905 aaPredicted RBP14.4□□□□□ -0.1
CDH1-212ENST00000611625 TMEM67Q5HYA8 995 aa14.4□□□□□ -0.1
CDH1-212ENST00000611625 SLC5A1P13866 664 aa14.4□□□□□ -0.1
CDH1-212ENST00000611625 AXDND1Q5T1B0 1012 aaPredicted RBP14.4□□□□□ -0.1
CDH1-212ENST00000611625 GAS2L3Q86XJ1 694 aa14.4□□□□□ -0.1
CDH1-212ENST00000611625 CCDC144CPQ8IYA2 1237 aa14.4□□□□□ -0.1
CDH1-212ENST00000611625 DEF6Q9H4E7 631 aa14.4□□□□□ -0.1
CDH1-212ENST00000611625 DDX21Q9NR30 783 aaKnown RBP eCLIP14.4□□□□□ -0.1
CDH1-212ENST00000611625 PTGS1P23219 599 aa14.4□□□□□ -0.11
CDH1-212ENST00000611625 RNF41Q9H4P4 317 aaPredicted RBP14.4□□□□□ -0.11
CDH1-212ENST00000611625 CLASP1Q7Z460 1538 aa14.39□□□□□ -0.11
CDH1-212ENST00000611625 ERICH4A6NGS2 130 aa14.39□□□□□ -0.11
CDH1-212ENST00000611625 RNMTO43148 476 aaKnown RBP14.39□□□□□ -0.11
CDH1-212ENST00000611625 NBPF7P0C2Y1 421 aaPredicted RBP14.39□□□□□ -0.11
CDH1-212ENST00000611625 SOGA3Q5TF21 947 aa14.39□□□□□ -0.11
CDH1-212ENST00000611625 CCDC102BQ68D86 513 aa14.39□□□□□ -0.11
CDH1-212ENST00000611625 SPDYE4A6NLX3 237 aa14.39□□□□□ -0.11
CDH1-212ENST00000611625 PKP1Q13835 747 aa14.39□□□□□ -0.11
CDH1-212ENST00000611625 PAG1Q9NWQ8 432 aa14.39□□□□□ -0.11
CDH1-212ENST00000611625 TCEAL9Q9UHQ7 104 aa14.39□□□□□ -0.11
CDH1-212ENST00000611625 TBX22Q9Y458 520 aa14.39□□□□□ -0.11
CDH1-212ENST00000611625 SYKP43405 635 aa14.39□□□□□ -0.11
CDH1-212ENST00000611625 CDR1P51861 262 aa14.39□□□□□ -0.11
CDH1-212ENST00000611625 GADD45BO75293 160 aaPredicted RBP14.38□□□□□ -0.11
CDH1-212ENST00000611625 LUZP1Q86V48 1076 aa14.38□□□□□ -0.11
CDH1-212ENST00000611625 AOPEPQ8N6M6 819 aa14.38□□□□□ -0.11
CDH1-212ENST00000611625 ARHGEF10O15013 1369 aa14.38□□□□□ -0.11
CDH1-212ENST00000611625 CD2BP2O95400 341 aaKnown RBP14.38□□□□□ -0.11
CDH1-212ENST00000611625 PLEKHG3A1L390 1219 aa14.38□□□□□ -0.11
CDH1-212ENST00000611625 KCNA6P17658 529 aa14.38□□□□□ -0.11
CDH1-212ENST00000611625 CASQ1P31415 396 aa14.38□□□□□ -0.11
CDH1-212ENST00000611625 KIF5CO60282 957 aa14.38□□□□□ -0.11
CDH1-212ENST00000611625 EIF5P55010 431 aaKnown RBP14.38□□□□□ -0.11
CDH1-212ENST00000611625 TFCP2Q12800 502 aa14.38□□□□□ -0.11
CDH1-212ENST00000611625 DHX32Q7L7V1 743 aaKnown RBP14.38□□□□□ -0.11
CDH1-212ENST00000611625 PTPDC1A2A3K4 754 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 NFATC2IPQ8NCF5 419 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 CTCFLQ8NI51 663 aaPredicted RBP14.37□□□□□ -0.11
CDH1-212ENST00000611625 ZMYND15Q9H091 742 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 SHROOM2Q13796 1616 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 APOBRQ0VD83 1088 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 IQCA1Q86XH1 822 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 SLC26A6Q9BXS9 759 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 KIF1BO60333 1816 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 GCP02774 474 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 KRT18P05783 430 aaKnown RBP14.37□□□□□ -0.11
CDH1-212ENST00000611625 KIF4BQ2VIQ3 1234 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 PALD1Q9ULE6 856 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 SLC27A2O14975 620 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 RANBP6O60518 1105 aaKnown RBP14.37□□□□□ -0.11
CDH1-212ENST00000611625 RPS6KB1P23443 525 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 CCDC43Q96MW1 224 aaKnown RBP14.37□□□□□ -0.11
CDH1-212ENST00000611625 PPP1R9BQ96SB3 815 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 ALG1Q9BT22 464 aa14.37□□□□□ -0.11
CDH1-212ENST00000611625 LUC7LQ9NQ29 371 aaKnown RBP14.37□□□□□ -0.11
CDH1-212ENST00000611625 USP44Q9H0E7 712 aa14.36□□□□□ -0.11
CDH1-212ENST00000611625 IKQ13123 557 aaPredicted RBP14.36□□□□□ -0.11
CDH1-212ENST00000611625 CCDC181Q5TID7 509 aa14.36□□□□□ -0.11
CDH1-212ENST00000611625 FAM173BQ6P4H8 233 aa14.36□□□□□ -0.11
CDH1-212ENST00000611625 SSH2Q76I76 1423 aa14.36□□□□□ -0.11
CDH1-212ENST00000611625 FAM227BQ96M60 508 aa14.36□□□□□ -0.11
CDH1-212ENST00000611625 TEX13AQ9BXU3 409 aaPredicted RBP14.36□□□□□ -0.11
CDH1-212ENST00000611625 TANGO6Q9C0B7 1094 aa14.36□□□□□ -0.11
CDH1-212ENST00000611625 AATKQ6ZMQ8 1374 aa14.36□□□□□ -0.11
CDH1-212ENST00000611625 FAM135BQ49AJ0 1406 aa14.36□□□□□ -0.11
CDH1-212ENST00000611625 ATP2B3Q16720 1220 aa14.36□□□□□ -0.11
CDH1-212ENST00000611625 KIAA1328Q86T90 577 aa14.36□□□□□ -0.11
CDH1-212ENST00000611625 SSH3Q8TE77 659 aa14.36□□□□□ -0.11
CDH1-212ENST00000611625 LGR6Q9HBX8 967 aa14.36□□□□□ -0.11
CDH1-212ENST00000611625 UNC13BO14795 1591 aa14.36□□□□□ -0.11
CDH1-212ENST00000611625 CPLX3Q8WVH0 158 aa14.36□□□□□ -0.11
CDH1-212ENST00000611625 CROCC2H7BZ55 1655 aa14.35□□□□□ -0.11
CDH1-212ENST00000611625 NEO1Q92859 1461 aa14.35□□□□□ -0.11
CDH1-212ENST00000611625 ZBTB43O43298 467 aa14.35□□□□□ -0.11
CDH1-212ENST00000611625 PRC1O43663 620 aa14.35□□□□□ -0.11
CDH1-212ENST00000611625 CCDC102AQ96A19 550 aa14.35□□□□□ -0.11
CDH1-212ENST00000611625 SPTLC2O15270 562 aa14.35□□□□□ -0.11
CDH1-212ENST00000611625 UBASH3AP57075 661 aa14.35□□□□□ -0.11
CDH1-212ENST00000611625 CAVIN4Q5BKX8 364 aa14.35□□□□□ -0.11
CDH1-212ENST00000611625 CHST3Q7LGC8 479 aa14.35□□□□□ -0.11
CDH1-212ENST00000611625 GBP3Q9H0R5 595 aa14.35□□□□□ -0.11
CDH1-212ENST00000611625 GOLGA6L9A6NEM1 432 aa14.35□□□□□ -0.11
CDH1-212ENST00000611625 SAMD1Q6SPF0 538 aaPredicted RBP14.35□□□□□ -0.11
CDH1-212ENST00000611625 TET3O43151 1660 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms