RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 ZNF445P59923 1031 aa14.29□□□□□ -0.12
SRRT-213ENST00000611405 HMG20BQ9P0W2 317 aa14.29□□□□□ -0.12
SRRT-213ENST00000611405 TJP1Q07157 1748 aa14.29□□□□□ -0.12
SRRT-213ENST00000611405 CIAO1O76071 339 aa14.29□□□□□ -0.12
SRRT-213ENST00000611405 PANK2Q9BZ23 570 aa14.29□□□□□ -0.12
SRRT-213ENST00000611405 RPAP1Q9BWH6 1393 aaPredicted RBP14.29□□□□□ -0.12
SRRT-213ENST00000611405 EYA2O00167 538 aa14.28□□□□□ -0.12
SRRT-213ENST00000611405 STARD3NLO95772 234 aa14.28□□□□□ -0.12
SRRT-213ENST00000611405 MBD3O95983 291 aa14.28□□□□□ -0.12
SRRT-213ENST00000611405 CPA1P15085 419 aa14.28□□□□□ -0.12
SRRT-213ENST00000611405 KIF6Q6ZMV9 814 aa14.28□□□□□ -0.12
SRRT-213ENST00000611405 SMC3Q9UQE7 1217 aa14.28□□□□□ -0.12
SRRT-213ENST00000611405 TSGA10IPQ3SY00 556 aa14.28□□□□□ -0.12
SRRT-213ENST00000611405 CAVIN1Q6NZI2 390 aaKnown RBP14.28□□□□□ -0.12
SRRT-213ENST00000611405 GPT2Q8TD30 523 aa14.28□□□□□ -0.12
SRRT-213ENST00000611405 ASAP1Q9ULH1 1129 aa14.28□□□□□ -0.12
SRRT-213ENST00000611405 DISP2A7MBM2 1401 aa14.28□□□□□ -0.12
SRRT-213ENST00000611405 TAF5LO75529 589 aa14.28□□□□□ -0.12
SRRT-213ENST00000611405 DNAJC10Q8IXB1 793 aa14.28□□□□□ -0.12
SRRT-213ENST00000611405 FAM43AQ8N2R8 423 aa14.28□□□□□ -0.12
SRRT-213ENST00000611405 EDC3Q96F86 508 aaKnown RBP14.28□□□□□ -0.12
SRRT-213ENST00000611405 ALDH8A1Q9H2A2 487 aaPredicted RBP14.28□□□□□ -0.12
SRRT-213ENST00000611405 ZNF589Q86UQ0 364 aaPredicted RBP14.27□□□□□ -0.12
SRRT-213ENST00000611405 DNAJC2Q99543 621 aaKnown RBP14.27□□□□□ -0.12
SRRT-213ENST00000611405 COL14A1Q05707 1796 aaKnown RBP14.27□□□□□ -0.13
SRRT-213ENST00000611405 ANKRD1Q15327 319 aa14.27□□□□□ -0.13
SRRT-213ENST00000611405 ZSCAN23Q3MJ62 389 aa14.27□□□□□ -0.13
SRRT-213ENST00000611405 USPL1Q5W0Q7 1092 aa14.27□□□□□ -0.13
SRRT-213ENST00000611405 FBXO3Q9UK99 471 aa14.27□□□□□ -0.13
SRRT-213ENST00000611405 NEUROD6Q96NK8 337 aa14.26□□□□□ -0.13
SRRT-213ENST00000611405 PCCAP05165 728 aaPredicted RBP14.26□□□□□ -0.13
SRRT-213ENST00000611405 KRT32Q14532 448 aa14.26□□□□□ -0.13
SRRT-213ENST00000611405 MCMDC2Q4G0Z9 681 aa14.26□□□□□ -0.13
SRRT-213ENST00000611405 BLOC1S2Q6QNY1 142 aa14.26□□□□□ -0.13
SRRT-213ENST00000611405 KBTBD3Q8NAB2 608 aa14.26□□□□□ -0.13
SRRT-213ENST00000611405 LARP6Q9BRS8 491 aaKnown RBP14.26□□□□□ -0.13
SRRT-213ENST00000611405 ZSCAN22P10073 491 aaPredicted RBP14.25□□□□□ -0.13
SRRT-213ENST00000611405 CHAMP1Q96JM3 812 aa14.25□□□□□ -0.13
SRRT-213ENST00000611405 PLA2G12BQ9BX93 195 aa14.25□□□□□ -0.13
SRRT-213ENST00000611405 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
SRRT-213ENST00000611405 STX6O43752 255 aa14.25□□□□□ -0.13
SRRT-213ENST00000611405 LARGE1O95461 756 aa14.25□□□□□ -0.13
SRRT-213ENST00000611405 CCDC83Q8IWF9 413 aa14.25□□□□□ -0.13
SRRT-213ENST00000611405 PALLDQ8WX93 1383 aa14.25□□□□□ -0.13
SRRT-213ENST00000611405 RPS6KB1P23443 525 aa14.25□□□□□ -0.13
SRRT-213ENST00000611405 CCDC57Q2TAC2 916 aa14.25□□□□□ -0.13
SRRT-213ENST00000611405 LRRC24Q50LG9 513 aa14.25□□□□□ -0.13
SRRT-213ENST00000611405 ZNF330Q9Y3S2 320 aaPredicted RBP14.25□□□□□ -0.13
SRRT-213ENST00000611405 MAP3K15Q6ZN16 1313 aa14.24□□□□□ -0.13
SRRT-213ENST00000611405 ZNF609O15014 1411 aa14.24□□□□□ -0.13
SRRT-213ENST00000611405 SYT1P21579 422 aa14.24□□□□□ -0.13
SRRT-213ENST00000611405 DDX46Q7L014 1031 aaKnown RBP14.24□□□□□ -0.13
SRRT-213ENST00000611405 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.24□□□□□ -0.13
SRRT-213ENST00000611405 ZNF594Q96JF6 807 aaPredicted RBP14.24□□□□□ -0.13
SRRT-213ENST00000611405 SH3TC1Q8TE82 1336 aa14.24□□□□□ -0.13
SRRT-213ENST00000611405 BCL9O00512 1426 aa14.24□□□□□ -0.13
SRRT-213ENST00000611405 LRP6O75581 1613 aa14.24□□□□□ -0.13
SRRT-213ENST00000611405 EXOC5O00471 708 aa14.24□□□□□ -0.13
SRRT-213ENST00000611405 PDIA4P13667 645 aaKnown RBP14.24□□□□□ -0.13
SRRT-213ENST00000611405 TIMM10P62072 90 aa14.24□□□□□ -0.13
SRRT-213ENST00000611405 ME3Q16798 604 aa14.24□□□□□ -0.13
SRRT-213ENST00000611405 HSP90AB3PQ58FF7 597 aa14.24□□□□□ -0.13
SRRT-213ENST00000611405 ZBTB38Q8NAP3 1195 aaPredicted RBP14.24□□□□□ -0.13
SRRT-213ENST00000611405 PAG1Q9NWQ8 432 aa14.24□□□□□ -0.13
SRRT-213ENST00000611405 CEP126Q9P2H0 1117 aa14.24□□□□□ -0.13
SRRT-213ENST00000611405 ATP6V1DQ9Y5K8 247 aa14.24□□□□□ -0.13
SRRT-213ENST00000611405 GIGYF2Q6Y7W6 1299 aaKnown RBP14.23□□□□□ -0.13
SRRT-213ENST00000611405 HELLSQ9NRZ9 838 aa14.23□□□□□ -0.13
SRRT-213ENST00000611405 NDUFB9Q9Y6M9 179 aa14.23□□□□□ -0.13
SRRT-213ENST00000611405 GJB2P29033 226 aa14.23□□□□□ -0.13
SRRT-213ENST00000611405 TMEM87AQ8NBN3 555 aa14.23□□□□□ -0.13
SRRT-213ENST00000611405 TPCN1Q9ULQ1 816 aa14.23□□□□□ -0.13
SRRT-213ENST00000611405 AKAP2Q9Y2D5 859 aa14.23□□□□□ -0.13
SRRT-213ENST00000611405 CSF1RP07333 972 aa14.22□□□□□ -0.13
SRRT-213ENST00000611405 CDHR2Q9BYE9 1310 aa14.22□□□□□ -0.13
SRRT-213ENST00000611405 A0A1B0GUL7 405 aa14.22□□□□□ -0.13
SRRT-213ENST00000611405 GOLIM4O00461 696 aa14.22□□□□□ -0.13
SRRT-213ENST00000611405 CYP19A1P11511 503 aaPredicted RBP14.22□□□□□ -0.13
SRRT-213ENST00000611405 RBM27Q9P2N5 1060 aaKnown RBP14.22□□□□□ -0.13
SRRT-213ENST00000611405 AHDC1Q5TGY3 1603 aaPredicted RBP14.22□□□□□ -0.13
SRRT-213ENST00000611405 COL22A1Q8NFW1 1626 aaPredicted RBP14.22□□□□□ -0.13
SRRT-213ENST00000611405 F13A1P00488 732 aa14.21□□□□□ -0.13
SRRT-213ENST00000611405 IFIT1P09914 478 aaKnown RBP14.21□□□□□ -0.13
SRRT-213ENST00000611405 NASPP49321 788 aaPredicted RBP14.21□□□□□ -0.13
SRRT-213ENST00000611405 SYAP1Q96A49 352 aaPredicted RBP14.21□□□□□ -0.13
SRRT-213ENST00000611405 PUS3Q9BZE2 481 aaKnown RBP14.21□□□□□ -0.13
SRRT-213ENST00000611405 CCDC9Q9Y3X0 531 aaKnown RBP14.21□□□□□ -0.13
SRRT-213ENST00000611405 ITGB4P16144 1822 aa14.21□□□□□ -0.13
SRRT-213ENST00000611405 PLCH1Q4KWH8 1693 aa14.21□□□□□ -0.13
SRRT-213ENST00000611405 ST3GAL1Q11201 340 aa14.21□□□□□ -0.13
SRRT-213ENST00000611405 USP48Q86UV5 1035 aa14.21□□□□□ -0.13
SRRT-213ENST00000611405 TMEM63CQ9P1W3 806 aa14.21□□□□□ -0.13
SRRT-213ENST00000611405 CCDC129Q6ZRS4 1044 aa14.21□□□□□ -0.14
SRRT-213ENST00000611405 FAM89AQ96GI7 184 aa14.21□□□□□ -0.14
SRRT-213ENST00000611405 CDCA7Q9BWT1 371 aaPredicted RBP14.21□□□□□ -0.14
SRRT-213ENST00000611405 NSFL1CQ9UNZ2 370 aaKnown RBP14.21□□□□□ -0.14
SRRT-213ENST00000611405 IFIT5Q13325 482 aaKnown RBP14.2□□□□□ -0.14
SRRT-213ENST00000611405 TAF7LQ5H9L4 462 aa14.2□□□□□ -0.14
SRRT-213ENST00000611405 ZMYM1Q5SVZ6 1142 aa14.2□□□□□ -0.14
SRRT-213ENST00000611405 NECAB1Q8N987 351 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms