RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GIGYF1O75420 1035 aaPredicted RBP24.13■■□□□ 1.45
SSBP3-216ENST00000610401 RNF20Q5VTR2 975 aa24.13■■□□□ 1.45
SSBP3-216ENST00000610401 RPS6KB1P23443 525 aa24.13■■□□□ 1.45
SSBP3-216ENST00000610401 ISM2Q6H9L7 571 aa24.13■■□□□ 1.45
SSBP3-216ENST00000610401 NRKQ7Z2Y5 1582 aa24.12■■□□□ 1.45
SSBP3-216ENST00000610401 SETD1AO15047 1707 aaKnown RBP24.12■■□□□ 1.45
SSBP3-216ENST00000610401 OTUD7BQ6GQQ9 843 aa24.12■■□□□ 1.45
SSBP3-216ENST00000610401 MTERF4Q7Z6M4 381 aaKnown RBP24.12■■□□□ 1.45
SSBP3-216ENST00000610401 PHF8Q9UPP1 1060 aa24.12■■□□□ 1.45
SSBP3-216ENST00000610401 TFCP2Q12800 502 aa24.11■■□□□ 1.45
SSBP3-216ENST00000610401 CACTINQ8WUQ7 758 aaKnown RBP24.11■■□□□ 1.45
SSBP3-216ENST00000610401 COPS6Q7L5N1 327 aa24.11■■□□□ 1.45
SSBP3-216ENST00000610401 UBE3BQ7Z3V4 1068 aa24.11■■□□□ 1.45
SSBP3-216ENST00000610401 SPTLC3Q9NUV7 552 aa24.11■■□□□ 1.45
SSBP3-216ENST00000610401 GOLGA6L19H0YKK7 550 aa24.11■■□□□ 1.45
SSBP3-216ENST00000610401 CCDC85AQ96PX6 553 aaPredicted RBP24.11■■□□□ 1.45
SSBP3-216ENST00000610401 USP27XA6NNY8 438 aa24.1■■□□□ 1.45
SSBP3-216ENST00000610401 XAGE3Q8WTP9 111 aa24.1■■□□□ 1.45
SSBP3-216ENST00000610401 ZNF330Q9Y3S2 320 aaPredicted RBP24.1■■□□□ 1.45
SSBP3-216ENST00000610401 SPATA31D1Q6ZQQ2 1576 aa24.1■■□□□ 1.45
SSBP3-216ENST00000610401 RNMTO43148 476 aaKnown RBP24.1■■□□□ 1.45
SSBP3-216ENST00000610401 APOBRQ0VD83 1088 aa24.1■■□□□ 1.45
SSBP3-216ENST00000610401 PLEKHO1Q53GL0 409 aaPredicted RBP24.1■■□□□ 1.45
SSBP3-216ENST00000610401 C11orf57Q6ZUT1 292 aaPredicted RBP24.1■■□□□ 1.45
SSBP3-216ENST00000610401 ZBTB9Q96C00 473 aa24.09■■□□□ 1.45
SSBP3-216ENST00000610401 DBNDD2Q9BQY9 259 aa24.09■■□□□ 1.45
SSBP3-216ENST00000610401 TECPR2O15040 1411 aa24.09■■□□□ 1.45
SSBP3-216ENST00000610401 HSP90AB3PQ58FF7 597 aa24.09■■□□□ 1.45
SSBP3-216ENST00000610401 BECN2A8MW95 431 aa24.09■■□□□ 1.45
SSBP3-216ENST00000610401 IGKV5-2P06315 115 aa24.09■■□□□ 1.45
SSBP3-216ENST00000610401 PDCP20941 246 aa24.09■■□□□ 1.45
SSBP3-216ENST00000610401 PTPN21Q16825 1174 aa24.09■■□□□ 1.45
SSBP3-216ENST00000610401 ZSCAN25Q6NSZ9 544 aa24.09■■□□□ 1.45
SSBP3-216ENST00000610401 ERC1Q8IUD2 1116 aa24.08■■□□□ 1.45
SSBP3-216ENST00000610401 NEK1Q96PY6 1258 aa24.08■■□□□ 1.45
SSBP3-216ENST00000610401 BIN1O00499 593 aa24.08■■□□□ 1.45
SSBP3-216ENST00000610401 IP6K1Q92551 441 aa24.08■■□□□ 1.45
SSBP3-216ENST00000610401 ZNF75DP51815 510 aa24.07■■□□□ 1.44
SSBP3-216ENST00000610401 SCAND2PQ9GZW5 306 aaPredicted RBP24.07■■□□□ 1.44
SSBP3-216ENST00000610401 ZSCAN20P17040 1043 aaPredicted RBP24.07■■□□□ 1.44
SSBP3-216ENST00000610401 NFATC2IPQ8NCF5 419 aa24.07■■□□□ 1.44
SSBP3-216ENST00000610401 ORAI2Q96SN7 254 aa24.07■■□□□ 1.44
SSBP3-216ENST00000610401 DBNLQ9UJU6 430 aaKnown RBP24.07■■□□□ 1.44
SSBP3-216ENST00000610401 AKAP12Q02952 1782 aa24.07■■□□□ 1.44
SSBP3-216ENST00000610401 TAF5LO75529 589 aa24.06■■□□□ 1.44
SSBP3-216ENST00000610401 ME1P48163 572 aa24.06■■□□□ 1.44
SSBP3-216ENST00000610401 TM6SF1Q9BZW5 370 aa24.06■■□□□ 1.44
SSBP3-216ENST00000610401 GPHNQ9NQX3 736 aaPredicted RBP24.06■■□□□ 1.44
SSBP3-216ENST00000610401 GJB4Q9NTQ9 266 aa24.06■■□□□ 1.44
SSBP3-216ENST00000610401 AXIN2Q9Y2T1 843 aa24.06■■□□□ 1.44
SSBP3-216ENST00000610401 CYP21A2P08686 494 aa24.05■■□□□ 1.44
SSBP3-216ENST00000610401 HAND2P61296 217 aa24.05■■□□□ 1.44
SSBP3-216ENST00000610401 AKAP4Q5JQC9 854 aa24.05■■□□□ 1.44
SSBP3-216ENST00000610401 STK11IPQ8N1F8 1099 aa24.05■■□□□ 1.44
SSBP3-216ENST00000610401 GOLIM4O00461 696 aa24.05■■□□□ 1.44
SSBP3-216ENST00000610401 TIMM10P62072 90 aa24.05■■□□□ 1.44
SSBP3-216ENST00000610401 NEXNQ0ZGT2 675 aa24.05■■□□□ 1.44
SSBP3-216ENST00000610401 CCAR1Q8IX12 1150 aaKnown RBP24.05■■□□□ 1.44
SSBP3-216ENST00000610401 LINS1Q8NG48 757 aa24.05■■□□□ 1.44
SSBP3-216ENST00000610401 NLRP2Q9NX02 1062 aa24.05■■□□□ 1.44
SSBP3-216ENST00000610401 SCRN1Q12765 414 aa24.05■■□□□ 1.44
SSBP3-216ENST00000610401 SMAP1Q8IYB5 467 aaPredicted RBP24.05■■□□□ 1.44
SSBP3-216ENST00000610401 POLR3DP05423 398 aaPredicted RBP24.04■■□□□ 1.44
SSBP3-216ENST00000610401 ANKRD24Q8TF21 1146 aa24.04■■□□□ 1.44
SSBP3-216ENST00000610401 SNRKQ9NRH2 765 aa24.04■■□□□ 1.44
SSBP3-216ENST00000610401 RGPD8O14715 1765 aaPredicted RBP24.04■■□□□ 1.44
SSBP3-216ENST00000610401 NPHP3Q7Z494 1330 aa24.04■■□□□ 1.44
SSBP3-216ENST00000610401 DDX58O95786 925 aaKnown RBP24.03■■□□□ 1.44
SSBP3-216ENST00000610401 CLSTN2Q9H4D0 955 aa24.03■■□□□ 1.44
SSBP3-216ENST00000610401 IL17RAQ96F46 866 aa24.03■■□□□ 1.44
SSBP3-216ENST00000610401 XRN1Q8IZH2 1706 aaKnown RBP24.03■■□□□ 1.44
SSBP3-216ENST00000610401 CCDC112Q8NEF3 446 aa24.02■■□□□ 1.44
SSBP3-216ENST00000610401 NCBP1Q09161 790 aaKnown RBP24.02■■□□□ 1.44
SSBP3-216ENST00000610401 TTLL5Q6EMB2 1281 aa24.02■■□□□ 1.44
SSBP3-216ENST00000610401 GOLPH3LQ9H4A5 285 aa24.02■■□□□ 1.44
SSBP3-216ENST00000610401 COL15A1P39059 1388 aa24.02■■□□□ 1.44
SSBP3-216ENST00000610401 A0A0U1RQG5 324 aaPredicted RBP24.01■■□□□ 1.43
SSBP3-216ENST00000610401 DDX17Q92841 729 aaKnown RBP24.01■■□□□ 1.43
SSBP3-216ENST00000610401 A0A1B0GVL5 298 aa24.01■■□□□ 1.43
SSBP3-216ENST00000610401 ANKRD1Q15327 319 aa24.01■■□□□ 1.43
SSBP3-216ENST00000610401 USP28Q96RU2 1077 aa24.01■■□□□ 1.43
SSBP3-216ENST00000610401 STOX1Q6ZVD7 989 aa24.01■■□□□ 1.43
SSBP3-216ENST00000610401 SDF4Q9BRK5 362 aa24.01■■□□□ 1.43
SSBP3-216ENST00000610401 DDX19AQ9NUU7 478 aaKnown RBP24.01■■□□□ 1.43
SSBP3-216ENST00000610401 ALDH1L1O75891 902 aa24■■□□□ 1.43
SSBP3-216ENST00000610401 GCP02774 474 aa24■■□□□ 1.43
SSBP3-216ENST00000610401 GORABQ5T7V8 394 aa24■■□□□ 1.43
SSBP3-216ENST00000610401 GTF3C6Q969F1 213 aa24■■□□□ 1.43
SSBP3-216ENST00000610401 PLEKHG1Q9ULL1 1385 aa24■■□□□ 1.43
SSBP3-216ENST00000610401 AOPEPQ8N6M6 819 aa24■■□□□ 1.43
SSBP3-216ENST00000610401 A0A087WZG4 1122 aa23.99■■□□□ 1.43
SSBP3-216ENST00000610401 HSP90AA4PQ58FG1 418 aa23.99■■□□□ 1.43
SSBP3-216ENST00000610401 ZNF594Q96JF6 807 aaPredicted RBP23.99■■□□□ 1.43
SSBP3-216ENST00000610401 RGPD1P0DJD0 1748 aa23.99■■□□□ 1.43
SSBP3-216ENST00000610401 SKILP12757 684 aa23.99■■□□□ 1.43
SSBP3-216ENST00000610401 CEMIPQ8WUJ3 1361 aa23.99■■□□□ 1.43
SSBP3-216ENST00000610401 HIP1O00291 1037 aa23.99■■□□□ 1.43
SSBP3-216ENST00000610401 EPB41L2O43491 1005 aaKnown RBP23.99■■□□□ 1.43
SSBP3-216ENST00000610401 TBX22Q9Y458 520 aa23.99■■□□□ 1.43
SSBP3-216ENST00000610401 NEURL1BA8MQ27 555 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms