RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 ZNF574Q6ZN55 896 aaPredicted RBP4.88□□□□□ -1.63
ITGB5-213ENST00000608945 PRRT2Q7Z6L0 340 aaPredicted RBP4.88□□□□□ -1.63
ITGB5-213ENST00000608945 PNMA1Q8ND90 353 aa4.88□□□□□ -1.63
ITGB5-213ENST00000608945 TTC9Q92623 222 aa4.88□□□□□ -1.63
ITGB5-213ENST00000608945 PPP1R16BQ96T49 567 aa4.88□□□□□ -1.63
ITGB5-213ENST00000608945 ATG3Q9NT62 314 aa4.88□□□□□ -1.63
ITGB5-213ENST00000608945 ZBBXA8MT70 800 aa4.87□□□□□ -1.63
ITGB5-213ENST00000608945 SKOR2Q2VWA4 1001 aaPredicted RBP4.87□□□□□ -1.63
ITGB5-213ENST00000608945 PITPNM2Q9BZ72 1349 aa4.87□□□□□ -1.63
ITGB5-213ENST00000608945 EML1O00423 815 aa4.86□□□□□ -1.63
ITGB5-213ENST00000608945 INHAP05111 366 aa4.86□□□□□ -1.63
ITGB5-213ENST00000608945 BMP3P12645 472 aa4.86□□□□□ -1.63
ITGB5-213ENST00000608945 SYN1P17600 705 aa4.86□□□□□ -1.63
ITGB5-213ENST00000608945 CLK2P49760 499 aaKnown RBP4.86□□□□□ -1.63
ITGB5-213ENST00000608945 MLANAQ16655 118 aa4.86□□□□□ -1.63
ITGB5-213ENST00000608945 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.86□□□□□ -1.63
ITGB5-213ENST00000608945 OSBPL1AQ9BXW6 950 aa4.86□□□□□ -1.63
ITGB5-213ENST00000608945 KCNF1Q9H3M0 494 aa4.86□□□□□ -1.63
ITGB5-213ENST00000608945 ZNF503-AS2A6NEH8 195 aa4.85□□□□□ -1.63
ITGB5-213ENST00000608945 AKAP8O43823 692 aaKnown RBP4.85□□□□□ -1.63
ITGB5-213ENST00000608945 TYRO3Q06418 890 aa4.85□□□□□ -1.63
ITGB5-213ENST00000608945 CPSF6Q16630 551 aaKnown RBP eCLIP4.85□□□□□ -1.63
ITGB5-213ENST00000608945 PARP9Q8IXQ6 854 aa4.85□□□□□ -1.63
ITGB5-213ENST00000608945 FBXL6Q8N531 539 aa4.85□□□□□ -1.63
ITGB5-213ENST00000608945 ZDHHC1Q8WTX9 485 aa4.85□□□□□ -1.63
ITGB5-213ENST00000608945 CABP1Q9NZU7 370 aa4.85□□□□□ -1.63
ITGB5-213ENST00000608945 ZBTB42B2RXF5 422 aa4.84□□□□□ -1.63
ITGB5-213ENST00000608945 SYDE1Q6ZW31 735 aaPredicted RBP4.84□□□□□ -1.63
ITGB5-213ENST00000608945 CEP63Q96MT8 703 aa4.84□□□□□ -1.63
ITGB5-213ENST00000608945 CDK2AP1O14519 115 aa4.83□□□□□ -1.64
ITGB5-213ENST00000608945 GDF10P55107 478 aa4.83□□□□□ -1.64
ITGB5-213ENST00000608945 MTFR1Q15390 333 aa4.83□□□□□ -1.64
ITGB5-213ENST00000608945 ACAD11Q709F0 780 aa4.83□□□□□ -1.64
ITGB5-213ENST00000608945 SPRED2Q7Z698 418 aa4.83□□□□□ -1.64
ITGB5-213ENST00000608945 BORCS6Q96GS4 357 aa4.83□□□□□ -1.64
ITGB5-213ENST00000608945 RC3H2Q9HBD1 1191 aaKnown RBP4.83□□□□□ -1.64
ITGB5-213ENST00000608945 SRA1Q9HD15 236 aaKnown RBP4.83□□□□□ -1.64
ITGB5-213ENST00000608945 ADRB1P08588 477 aa4.82□□□□□ -1.64
ITGB5-213ENST00000608945 CRTC2Q53ET0 693 aaPredicted RBP4.82□□□□□ -1.64
ITGB5-213ENST00000608945 ELMSAN1Q6PJG2 1045 aa4.82□□□□□ -1.64
ITGB5-213ENST00000608945 KIAA1211Q6ZU35 1233 aa4.82□□□□□ -1.64
ITGB5-213ENST00000608945 GALNT11Q8NCW6 608 aa4.82□□□□□ -1.64
ITGB5-213ENST00000608945 PARD6AQ9NPB6 346 aa4.82□□□□□ -1.64
ITGB5-213ENST00000608945 ADAMTS6Q9UKP5 1117 aa4.82□□□□□ -1.64
ITGB5-213ENST00000608945 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.81□□□□□ -1.64
ITGB5-213ENST00000608945 NPIPB6E9PJ23 425 aa4.81□□□□□ -1.64
ITGB5-213ENST00000608945 CYP26A1O43174 497 aa4.81□□□□□ -1.64
ITGB5-213ENST00000608945 RNASE1P07998 156 aaKnown RBP4.81□□□□□ -1.64
ITGB5-213ENST00000608945 BCL7CQ8WUZ0 217 aaPredicted RBP4.81□□□□□ -1.64
ITGB5-213ENST00000608945 HSH2DQ96JZ2 352 aa4.81□□□□□ -1.64
ITGB5-213ENST00000608945 KCNK4Q9NYG8 393 aa4.81□□□□□ -1.64
ITGB5-213ENST00000608945 TM4SF5O14894 197 aa4.8□□□□□ -1.64
ITGB5-213ENST00000608945 PREPP48147 710 aa4.8□□□□□ -1.64
ITGB5-213ENST00000608945 GIMAP7Q8NHV1 300 aa4.8□□□□□ -1.64
ITGB5-213ENST00000608945 SMG9Q9H0W8 520 aaKnown RBP4.8□□□□□ -1.64
ITGB5-213ENST00000608945 MBNL3Q9NUK0 354 aaKnown RBP4.8□□□□□ -1.64
ITGB5-213ENST00000608945 GPC6Q9Y625 555 aaPredicted RBP4.8□□□□□ -1.64
ITGB5-213ENST00000608945 HOXD8P13378 290 aaPredicted RBP4.79□□□□□ -1.64
ITGB5-213ENST00000608945 NFKB1P19838 968 aa4.79□□□□□ -1.64
ITGB5-213ENST00000608945 ZXDCQ2QGD7 858 aaPredicted RBP4.79□□□□□ -1.64
ITGB5-213ENST00000608945 MAP4K3Q8IVH8 894 aa4.79□□□□□ -1.64
ITGB5-213ENST00000608945 LRRN4CLQ8ND94 238 aa4.79□□□□□ -1.64
ITGB5-213ENST00000608945 GSX2Q9BZM3 304 aa4.79□□□□□ -1.64
ITGB5-213ENST00000608945 ZC3H7BQ9UGR2 993 aaKnown RBP4.79□□□□□ -1.64
ITGB5-213ENST00000608945 A6NJY4 79 aa4.78□□□□□ -1.64
ITGB5-213ENST00000608945 TRIM34Q9BYJ4 488 aa4.78□□□□□ -1.64
ITGB5-213ENST00000608945 EFCC1Q9HA90 598 aa4.78□□□□□ -1.64
ITGB5-213ENST00000608945 NEUROD4Q9HD90 331 aa4.78□□□□□ -1.64
ITGB5-213ENST00000608945 SERTAD1Q9UHV2 236 aa4.78□□□□□ -1.64
ITGB5-213ENST00000608945 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.78□□□□□ -1.64
ITGB5-213ENST00000608945 MLLT1Q03111 559 aaPredicted RBP4.77□□□□□ -1.65
ITGB5-213ENST00000608945 TSGA10IPQ3SY00 556 aa4.77□□□□□ -1.65
ITGB5-213ENST00000608945 DCAF11Q8TEB1 546 aa4.77□□□□□ -1.65
ITGB5-213ENST00000608945 SLC4A9Q96Q91 983 aa4.77□□□□□ -1.65
ITGB5-213ENST00000608945 SFI1A8K8P3 1242 aa4.76□□□□□ -1.65
ITGB5-213ENST00000608945 RGS19P49795 217 aa4.76□□□□□ -1.65
ITGB5-213ENST00000608945 MCCD1P59942 119 aaPredicted RBP4.76□□□□□ -1.65
ITGB5-213ENST00000608945 NFIXQ14938 502 aa4.76□□□□□ -1.65
ITGB5-213ENST00000608945 ZNF280CQ8ND82 737 aa4.76□□□□□ -1.65
ITGB5-213ENST00000608945 L3MBTL2Q969R5 705 aa4.76□□□□□ -1.65
ITGB5-213ENST00000608945 CD320Q9NPF0 282 aa4.76□□□□□ -1.65
ITGB5-213ENST00000608945 SLC5A6Q9Y289 635 aa4.76□□□□□ -1.65
ITGB5-213ENST00000608945 IL22RA1Q8N6P7 574 aa4.75□□□□□ -1.65
ITGB5-213ENST00000608945 TRPM4Q8TD43 1214 aa4.75□□□□□ -1.65
ITGB5-213ENST00000608945 LIN37Q96GY3 246 aaPredicted RBP4.75□□□□□ -1.65
ITGB5-213ENST00000608945 METTL22Q9BUU2 404 aaPredicted RBP4.75□□□□□ -1.65
ITGB5-213ENST00000608945 HIF3AQ9Y2N7 669 aa4.75□□□□□ -1.65
ITGB5-213ENST00000608945 FUT4P22083 530 aa4.74□□□□□ -1.65
ITGB5-213ENST00000608945 ADMP35318 185 aa4.74□□□□□ -1.65
ITGB5-213ENST00000608945 SH3PXD2AQ5TCZ1 1133 aa4.74□□□□□ -1.65
ITGB5-213ENST00000608945 KRTAP5-11Q6L8G4 156 aa4.74□□□□□ -1.65
ITGB5-213ENST00000608945 ZSWIM9Q86XI8 627 aa4.74□□□□□ -1.65
ITGB5-213ENST00000608945 CXorf38Q8TB03 319 aa4.74□□□□□ -1.65
ITGB5-213ENST00000608945 POLR3EQ9NVU0 708 aa4.74□□□□□ -1.65
ITGB5-213ENST00000608945 ADAMTS20P59510 1910 aa4.74□□□□□ -1.65
ITGB5-213ENST00000608945 TMEM229AB2RXF0 380 aa4.73□□□□□ -1.65
ITGB5-213ENST00000608945 NFIBO00712 420 aa4.73□□□□□ -1.65
ITGB5-213ENST00000608945 AP1G2O75843 785 aa4.73□□□□□ -1.65
ITGB5-213ENST00000608945 MAP4P27816 1152 aaKnown RBP4.73□□□□□ -1.65
ITGB5-213ENST00000608945 KCNA10Q16322 511 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms