RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 KDM3BQ7LBC6 1761 aa17.66■□□□□ 0.42
CTSA-212ENST00000606394 MYL6BP14649 208 aa17.65■□□□□ 0.42
CTSA-212ENST00000606394 EIF4A1P60842 406 aaKnown RBP17.65■□□□□ 0.42
CTSA-212ENST00000606394 DPP8Q6V1X1 898 aaPredicted RBP17.65■□□□□ 0.42
CTSA-212ENST00000606394 C3orf67Q6ZVT6 689 aa17.65■□□□□ 0.42
CTSA-212ENST00000606394 SAGE1Q9NXZ1 904 aa17.65■□□□□ 0.42
CTSA-212ENST00000606394 ABCC4O15439 1325 aa17.65■□□□□ 0.42
CTSA-212ENST00000606394 NEFMP07197 916 aa17.64■□□□□ 0.41
CTSA-212ENST00000606394 HIRAP54198 1017 aaPredicted RBP17.64■□□□□ 0.41
CTSA-212ENST00000606394 SLC51AQ86UW1 340 aa17.64■□□□□ 0.41
CTSA-212ENST00000606394 MPNDQ8N594 471 aa17.64■□□□□ 0.41
CTSA-212ENST00000606394 UTP14AQ9BVJ6 771 aaKnown RBP17.64■□□□□ 0.41
CTSA-212ENST00000606394 ZNF408Q9H9D4 720 aa17.64■□□□□ 0.41
CTSA-212ENST00000606394 H7C1D1 291 aa17.63■□□□□ 0.41
CTSA-212ENST00000606394 CNOT7Q9UIV1 285 aaKnown RBP17.63■□□□□ 0.41
CTSA-212ENST00000606394 RAD17O75943 681 aa17.62■□□□□ 0.41
CTSA-212ENST00000606394 PPP2R1AP30153 589 aa17.62■□□□□ 0.41
CTSA-212ENST00000606394 HUNKP57058 714 aa17.62■□□□□ 0.41
CTSA-212ENST00000606394 TMC4Q7Z404 712 aa17.62■□□□□ 0.41
CTSA-212ENST00000606394 DPF2Q92785 391 aa17.62■□□□□ 0.41
CTSA-212ENST00000606394 TRPM4Q8TD43 1214 aa17.61■□□□□ 0.41
CTSA-212ENST00000606394 CCDC102AQ96A19 550 aa17.61■□□□□ 0.41
CTSA-212ENST00000606394 ANKRD36CQ5JPF3 1778 aa17.61■□□□□ 0.41
CTSA-212ENST00000606394 RGMBQ6NW40 437 aa17.6■□□□□ 0.41
CTSA-212ENST00000606394 HSP90AB3PQ58FF7 597 aa17.59■□□□□ 0.41
CTSA-212ENST00000606394 DDX46Q7L014 1031 aaKnown RBP17.59■□□□□ 0.41
CTSA-212ENST00000606394 LRP10Q7Z4F1 713 aa17.59■□□□□ 0.41
CTSA-212ENST00000606394 USP48Q86UV5 1035 aa17.59■□□□□ 0.41
CTSA-212ENST00000606394 MICALL2Q8IY33 904 aa17.59■□□□□ 0.41
CTSA-212ENST00000606394 DLG5Q8TDM6 1919 aa17.59■□□□□ 0.41
CTSA-212ENST00000606394 FAM155AB1AL88 458 aaPredicted RBP17.58■□□□□ 0.4
CTSA-212ENST00000606394 GRAPQ13588 217 aa17.58■□□□□ 0.4
CTSA-212ENST00000606394 C2orf69Q8N8R5 385 aa17.58■□□□□ 0.4
CTSA-212ENST00000606394 GRAPLQ8TC17 118 aaPredicted RBP17.58■□□□□ 0.4
CTSA-212ENST00000606394 ZIC5Q96T25 663 aa17.58■□□□□ 0.4
CTSA-212ENST00000606394 GBA2Q9HCG7 927 aaPredicted RBP17.58■□□□□ 0.4
CTSA-212ENST00000606394 YDJCA8MPS7 323 aa17.57■□□□□ 0.4
CTSA-212ENST00000606394 RPS12P25398 132 aaKnown RBP17.57■□□□□ 0.4
CTSA-212ENST00000606394 KRT26Q7Z3Y9 468 aa17.57■□□□□ 0.4
CTSA-212ENST00000606394 REM2Q8IYK8 340 aaPredicted RBP17.57■□□□□ 0.4
CTSA-212ENST00000606394 CENPBP07199 599 aaPredicted RBP17.56■□□□□ 0.4
CTSA-212ENST00000606394 PDIA6Q15084 440 aa17.56■□□□□ 0.4
CTSA-212ENST00000606394 NFE2L2Q16236 605 aa17.56■□□□□ 0.4
CTSA-212ENST00000606394 LAMB2P55268 1798 aa17.56■□□□□ 0.4
CTSA-212ENST00000606394 SH3TC1Q8TE82 1336 aa17.55■□□□□ 0.4
CTSA-212ENST00000606394 NLRP10Q86W26 655 aa17.55■□□□□ 0.4
CTSA-212ENST00000606394 DCPSQ96C86 337 aaKnown RBP17.55■□□□□ 0.4
CTSA-212ENST00000606394 LRRC37AA6NMS7 1700 aa17.55■□□□□ 0.4
CTSA-212ENST00000606394 DUOX1Q9NRD9 1551 aa17.54■□□□□ 0.4
CTSA-212ENST00000606394 SHTN1A0MZ66 631 aa17.54■□□□□ 0.4
CTSA-212ENST00000606394 HCLS1P14317 486 aaPredicted RBP17.54■□□□□ 0.4
CTSA-212ENST00000606394 ZNF157P51786 506 aaPredicted RBP17.54■□□□□ 0.4
CTSA-212ENST00000606394 KIF23Q02241 960 aaPredicted RBP17.54■□□□□ 0.4
CTSA-212ENST00000606394 WASHC4Q2M389 1173 aa17.54■□□□□ 0.4
CTSA-212ENST00000606394 PRPF38BQ5VTL8 546 aaKnown RBP17.54■□□□□ 0.4
CTSA-212ENST00000606394 SAMD7Q7Z3H4 446 aa17.54■□□□□ 0.4
CTSA-212ENST00000606394 PLEKHF1Q96S99 279 aa17.54■□□□□ 0.4
CTSA-212ENST00000606394 PNNQ9H307 717 aaKnown RBP17.54■□□□□ 0.4
CTSA-212ENST00000606394 BABAM1Q9NWV8 329 aa17.54■□□□□ 0.4
CTSA-212ENST00000606394 RNF186Q9NXI6 227 aa17.54■□□□□ 0.4
CTSA-212ENST00000606394 AKAP11Q9UKA4 1901 aa17.54■□□□□ 0.4
CTSA-212ENST00000606394 PSMD14O00487 310 aa17.53■□□□□ 0.4
CTSA-212ENST00000606394 TRMT112Q9UI30 125 aaKnown RBP17.53■□□□□ 0.4
CTSA-212ENST00000606394 ZBTB12Q9Y330 459 aaPredicted RBP17.53■□□□□ 0.4
CTSA-212ENST00000606394 POLR2AP24928 1970 aaKnown RBP17.52■□□□□ 0.4
CTSA-212ENST00000606394 TRPA1O75762 1119 aa17.52■□□□□ 0.4
CTSA-212ENST00000606394 SOX10P56693 466 aa17.52■□□□□ 0.4
CTSA-212ENST00000606394 TCIRG1Q13488 830 aa17.52■□□□□ 0.4
CTSA-212ENST00000606394 TBC1D10BQ4KMP7 808 aaPredicted RBP17.52■□□□□ 0.4
CTSA-212ENST00000606394 CTU1Q7Z7A3 348 aaKnown RBP17.52■□□□□ 0.4
CTSA-212ENST00000606394 THUMPD2Q9BTF0 503 aaKnown RBP17.52■□□□□ 0.4
CTSA-212ENST00000606394 TSPYL4Q9UJ04 414 aa17.52■□□□□ 0.4
CTSA-212ENST00000606394 SLC10A3P09131 477 aa17.51■□□□□ 0.39
CTSA-212ENST00000606394 EIF2S2P20042 333 aaKnown RBP17.51■□□□□ 0.39
CTSA-212ENST00000606394 MIER1Q8N108 512 aa17.51■□□□□ 0.39
CTSA-212ENST00000606394 PKN2Q16513 984 aaKnown RBP17.5■□□□□ 0.39
CTSA-212ENST00000606394 PROSER3Q2NL68 480 aa17.5■□□□□ 0.39
CTSA-212ENST00000606394 DLK2Q6UY11 383 aa17.5■□□□□ 0.39
CTSA-212ENST00000606394 COPS6Q7L5N1 327 aa17.5■□□□□ 0.39
CTSA-212ENST00000606394 SULF1Q8IWU6 871 aa17.5■□□□□ 0.39
CTSA-212ENST00000606394 CSRNP1Q96S65 589 aa17.5■□□□□ 0.39
CTSA-212ENST00000606394 EYA3Q99504 573 aa17.5■□□□□ 0.39
CTSA-212ENST00000606394 NSFL1CQ9UNZ2 370 aaKnown RBP17.5■□□□□ 0.39
CTSA-212ENST00000606394 MAPK8IP3Q9UPT6 1336 aa17.49■□□□□ 0.39
CTSA-212ENST00000606394 ADM5C9JUS6 153 aa17.49■□□□□ 0.39
CTSA-212ENST00000606394 EGFRP00533 1210 aa17.49■□□□□ 0.39
CTSA-212ENST00000606394 FKBP1BP68106 108 aa17.49■□□□□ 0.39
CTSA-212ENST00000606394 DBNDD1Q9H9R9 158 aa17.49■□□□□ 0.39
CTSA-212ENST00000606394 DDX60Q8IY21 1712 aaKnown RBP17.49■□□□□ 0.39
CTSA-212ENST00000606394 SF3B3Q15393 1217 aaKnown RBP17.48■□□□□ 0.39
CTSA-212ENST00000606394 KIF4BQ2VIQ3 1234 aa17.48■□□□□ 0.39
CTSA-212ENST00000606394 XAGE3Q8WTP9 111 aa17.48■□□□□ 0.39
CTSA-212ENST00000606394 C6orf229H3BNL8 230 aa17.47■□□□□ 0.39
CTSA-212ENST00000606394 ECE2O60344 883 aa17.47■□□□□ 0.39
CTSA-212ENST00000606394 VIL1P09327 827 aaKnown RBP17.47■□□□□ 0.39
CTSA-212ENST00000606394 POLLQ9UGP5 575 aa17.47■□□□□ 0.39
CTSA-212ENST00000606394 RTL9Q8NET4 1388 aa17.47■□□□□ 0.39
CTSA-212ENST00000606394 TAF1P21675 1872 aa17.47■□□□□ 0.39
CTSA-212ENST00000606394 ZNF609O15014 1411 aa17.47■□□□□ 0.39
CTSA-212ENST00000606394 ANXA1P04083 346 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms