RNA–Protein interactions for RNA: ENST00000604828.1

FOCAD-214, Transcript of focadhesin, humanhuman

Gene FOCAD, Length 1,973 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-214ENST00000604828 COL15A1P39059 1388 aa12.28□□□□□ -0.44
FOCAD-214ENST00000604828 PLSCR1O15162 318 aa12.27□□□□□ -0.44
FOCAD-214ENST00000604828 ZSCAN22P10073 491 aaPredicted RBP12.27□□□□□ -0.44
FOCAD-214ENST00000604828 FOXD4L5Q5VV16 416 aaPredicted RBP12.27□□□□□ -0.44
FOCAD-214ENST00000604828 FOXD4L4Q8WXT5 416 aaPredicted RBP12.27□□□□□ -0.44
FOCAD-214ENST00000604828 KAZALD1Q96I82 304 aa12.27□□□□□ -0.44
FOCAD-214ENST00000604828 CHAMP1Q96JM3 812 aa12.27□□□□□ -0.44
FOCAD-214ENST00000604828 ZSWIM6Q9HCJ5 1215 aa12.27□□□□□ -0.44
FOCAD-214ENST00000604828 SH2B1Q9NRF2 756 aaPredicted RBP12.27□□□□□ -0.44
FOCAD-214ENST00000604828 CCDC171Q6TFL3 1326 aa12.27□□□□□ -0.45
FOCAD-214ENST00000604828 PDIA4P13667 645 aaKnown RBP12.27□□□□□ -0.45
FOCAD-214ENST00000604828 CWF19L2Q2TBE0 894 aaKnown RBP12.27□□□□□ -0.45
FOCAD-214ENST00000604828 AACSQ86V21 672 aa12.27□□□□□ -0.45
FOCAD-214ENST00000604828 PIGBQ92521 554 aa12.27□□□□□ -0.45
FOCAD-214ENST00000604828 DCAF5Q96JK2 942 aa12.27□□□□□ -0.45
FOCAD-214ENST00000604828 NAP1L5Q96NT1 182 aaPredicted RBP12.27□□□□□ -0.45
FOCAD-214ENST00000604828 ATP6V1DQ9Y5K8 247 aa12.27□□□□□ -0.45
FOCAD-214ENST00000604828 SASH1O94885 1247 aa12.26□□□□□ -0.45
FOCAD-214ENST00000604828 G3BP1Q13283 466 aaKnown RBP eCLIP12.26□□□□□ -0.45
FOCAD-214ENST00000604828 NECTIN1Q15223 517 aa12.26□□□□□ -0.45
FOCAD-214ENST00000604828 TSPY26PQ9H489 355 aa12.26□□□□□ -0.45
FOCAD-214ENST00000604828 SLC52A2Q9HAB3 445 aa12.26□□□□□ -0.45
FOCAD-214ENST00000604828 RFX7Q2KHR2 1363 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 STX6O43752 255 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 CASTP20810 708 aaKnown RBP12.25□□□□□ -0.45
FOCAD-214ENST00000604828 MCM5P33992 734 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 PTH1RQ03431 593 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 ZNF790Q6PG37 636 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 USP48Q86UV5 1035 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 BICC1Q9H694 974 aaKnown RBP12.25□□□□□ -0.45
FOCAD-214ENST00000604828 NOL7Q9UMY1 257 aaKnown RBP12.25□□□□□ -0.45
FOCAD-214ENST00000604828 PA2G4Q9UQ80 394 aaKnown RBP12.25□□□□□ -0.45
FOCAD-214ENST00000604828 SMC3Q9UQE7 1217 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 LAMB4A4D0S4 1761 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 ITGB4P16144 1822 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 PRAMEF22A3QJZ6 481 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 F13A1P00488 732 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 IGKV5-2P06315 115 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 MSNP26038 577 aaKnown RBP12.25□□□□□ -0.45
FOCAD-214ENST00000604828 KCNQ4P56696 695 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 NEXNQ0ZGT2 675 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 TXNRD1Q16881 649 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 ALDH8A1Q9H2A2 487 aaPredicted RBP12.25□□□□□ -0.45
FOCAD-214ENST00000604828 PDRG1Q9NUG6 133 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 CYP46A1Q9Y6A2 500 aa12.25□□□□□ -0.45
FOCAD-214ENST00000604828 RGPD3A6NKT7 1758 aaPredicted RBP12.24□□□□□ -0.45
FOCAD-214ENST00000604828 RGPD4Q7Z3J3 1758 aa12.24□□□□□ -0.45
FOCAD-214ENST00000604828 MED23Q9ULK4 1368 aa12.24□□□□□ -0.45
FOCAD-214ENST00000604828 RREB1Q92766 1687 aa12.24□□□□□ -0.45
FOCAD-214ENST00000604828 NEURL1BA8MQ27 555 aa12.24□□□□□ -0.45
FOCAD-214ENST00000604828 LETM1O95202 739 aaPredicted RBP12.24□□□□□ -0.45
FOCAD-214ENST00000604828 ZKSCAN1P17029 563 aaPredicted RBP12.24□□□□□ -0.45
FOCAD-214ENST00000604828 SYT1P21579 422 aa12.24□□□□□ -0.45
FOCAD-214ENST00000604828 CSPP1Q1MSJ5 1256 aa12.24□□□□□ -0.45
FOCAD-214ENST00000604828 FAM184AQ8NB25 1140 aa12.24□□□□□ -0.45
FOCAD-214ENST00000604828 MAP4K1Q92918 833 aa12.24□□□□□ -0.45
FOCAD-214ENST00000604828 EAF2Q96CJ1 260 aaPredicted RBP12.24□□□□□ -0.45
FOCAD-214ENST00000604828 JAKMIP1Q96N16 626 aaKnown RBP12.24□□□□□ -0.45
FOCAD-214ENST00000604828 TMOD3Q9NYL9 352 aa12.24□□□□□ -0.45
FOCAD-214ENST00000604828 ERVV-2B6SEH9 535 aa12.23□□□□□ -0.45
FOCAD-214ENST00000604828 ZNF500O60304 480 aaPredicted RBP12.23□□□□□ -0.45
FOCAD-214ENST00000604828 UVSSAQ2YD98 709 aa12.23□□□□□ -0.45
FOCAD-214ENST00000604828 CCDC183Q5T5S1 534 aa12.23□□□□□ -0.45
FOCAD-214ENST00000604828 PRPF40BQ6NWY9 871 aaKnown RBP12.23□□□□□ -0.45
FOCAD-214ENST00000604828 RIC3Q7Z5B4 369 aa12.23□□□□□ -0.45
FOCAD-214ENST00000604828 METTL22Q9BUU2 404 aaPredicted RBP12.23□□□□□ -0.45
FOCAD-214ENST00000604828 LRRC4BQ9NT99 713 aa12.23□□□□□ -0.45
FOCAD-214ENST00000604828 CCDC39Q9UFE4 941 aa12.23□□□□□ -0.45
FOCAD-214ENST00000604828 GADD45BO75293 160 aaPredicted RBP12.23□□□□□ -0.45
FOCAD-214ENST00000604828 TPM2P07951 284 aa12.23□□□□□ -0.45
FOCAD-214ENST00000604828 PSMA5P28066 241 aa12.23□□□□□ -0.45
FOCAD-214ENST00000604828 UBE2HP62256 183 aa12.23□□□□□ -0.45
FOCAD-214ENST00000604828 GCKRQ14397 625 aa12.23□□□□□ -0.45
FOCAD-214ENST00000604828 CREB3L3Q68CJ9 461 aa12.23□□□□□ -0.45
FOCAD-214ENST00000604828 NFATC2IPQ8NCF5 419 aa12.23□□□□□ -0.45
FOCAD-214ENST00000604828 ASAP1Q9ULH1 1129 aa12.23□□□□□ -0.45
FOCAD-214ENST00000604828 RBM8AQ9Y5S9 174 aaKnown RBP12.23□□□□□ -0.45
FOCAD-214ENST00000604828 NUP188Q5SRE5 1749 aa12.22□□□□□ -0.45
FOCAD-214ENST00000604828 OFD1O75665 1012 aa12.22□□□□□ -0.45
FOCAD-214ENST00000604828 TERF1P54274 439 aa12.22□□□□□ -0.45
FOCAD-214ENST00000604828 NMIQ13287 307 aaPredicted RBP12.22□□□□□ -0.45
FOCAD-214ENST00000604828 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.22□□□□□ -0.45
FOCAD-214ENST00000604828 COPRSQ9NQ92 184 aa12.22□□□□□ -0.45
FOCAD-214ENST00000604828 GOLGB1Q14789 3259 aaKnown RBP12.22□□□□□ -0.45
FOCAD-214ENST00000604828 ARFGEF2Q9Y6D5 1785 aa12.22□□□□□ -0.45
FOCAD-214ENST00000604828 PALLDQ8WX93 1383 aa12.22□□□□□ -0.45
FOCAD-214ENST00000604828 LARGE1O95461 756 aa12.21□□□□□ -0.45
FOCAD-214ENST00000604828 CABP4P57796 275 aa12.21□□□□□ -0.45
FOCAD-214ENST00000604828 ANKRD1Q15327 319 aa12.21□□□□□ -0.45
FOCAD-214ENST00000604828 ADCK5Q3MIX3 580 aa12.21□□□□□ -0.45
FOCAD-214ENST00000604828 TSGA10IPQ3SY00 556 aa12.21□□□□□ -0.45
FOCAD-214ENST00000604828 RNF20Q5VTR2 975 aa12.21□□□□□ -0.45
FOCAD-214ENST00000604828 LRP10Q7Z4F1 713 aa12.21□□□□□ -0.45
FOCAD-214ENST00000604828 HMG20BQ9P0W2 317 aa12.21□□□□□ -0.45
FOCAD-214ENST00000604828 MTMR6Q9Y217 621 aa12.21□□□□□ -0.45
FOCAD-214ENST00000604828 ZKSCAN5Q9Y2L8 839 aa12.21□□□□□ -0.45
FOCAD-214ENST00000604828 PSDA5PKW4 1024 aaPredicted RBP12.21□□□□□ -0.46
FOCAD-214ENST00000604828 SLC27A2O14975 620 aa12.21□□□□□ -0.46
FOCAD-214ENST00000604828 GJB2P29033 226 aa12.21□□□□□ -0.46
FOCAD-214ENST00000604828 AIMP1Q12904 312 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms