RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 POM121CA8CG34 1229 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 CCDC144BQ3MJ40 725 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 MAP9Q49MG5 647 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 PCMTD1Q96MG8 357 aaPredicted RBP5.63□□□□□ -1.51
LINC01109-201ENST00000603837 SPSB2Q99619 263 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 CHST12Q9NRB3 414 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 PLA2G2EQ9NZK7 142 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 CDK13Q14004 1512 aaKnown RBP5.63□□□□□ -1.51
LINC01109-201ENST00000603837 ABCA8O94911 1581 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 MYOM3Q5VTT5 1437 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 KIF1CO43896 1103 aaKnown RBP5.62□□□□□ -1.51
LINC01109-201ENST00000603837 TTC39BQ5VTQ0 682 aaPredicted RBP5.62□□□□□ -1.51
LINC01109-201ENST00000603837 C16orf87Q6PH81 154 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 BRICD5Q6PL45 260 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 NKX2-3Q8TAU0 364 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 THAP11Q96EK4 314 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 MUC3BQ9H195 1237 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 TOMM22Q9NS69 142 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 CCDC39Q9UFE4 941 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 ZNF330Q9Y3S2 320 aaPredicted RBP5.62□□□□□ -1.51
LINC01109-201ENST00000603837 ZCCHC11Q5TAX3 1644 aaKnown RBP5.62□□□□□ -1.51
LINC01109-201ENST00000603837 ZMYM4Q5VZL5 1548 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 FAM200BP0CF97 657 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 ZNF853P0CG23 659 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 RBM5P52756 815 aaKnown RBP eCLIP5.62□□□□□ -1.51
LINC01109-201ENST00000603837 RAD51AP2Q09MP3 1159 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 KIAA2012Q0VF49 1180 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 RPUSD2Q8IZ73 545 aaKnown RBP5.62□□□□□ -1.51
LINC01109-201ENST00000603837 UHMK1Q8TAS1 419 aaKnown RBP5.62□□□□□ -1.51
LINC01109-201ENST00000603837 GJA3Q9Y6H8 435 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 ADAMTSL3P82987 1691 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 DISP1Q96F81 1524 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 FAM135AQ9P2D6 1515 aa5.62□□□□□ -1.51
LINC01109-201ENST00000603837 ECEL1O95672 775 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 MTMR2Q13614 643 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 TSNAXIP1Q2TAA8 658 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 DNAJC21Q5F1R6 531 aaKnown RBP5.61□□□□□ -1.51
LINC01109-201ENST00000603837 PMFBP1Q8TBY8 1022 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 KCNB2Q92953 911 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 IL17RAQ96F46 866 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 CRBNQ96SW2 442 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 KDM2BQ8NHM5 1336 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 NUTM2BA6NNL0 878 aaPredicted RBP5.61□□□□□ -1.51
LINC01109-201ENST00000603837 NUTM2EB1AL46 878 aaPredicted RBP5.61□□□□□ -1.51
LINC01109-201ENST00000603837 FAM163BP0C2L3 166 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 PAX7P23759 505 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 QPCTQ16769 361 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 TUSC1Q2TAM9 212 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 NUTM2DQ5VT03 806 aaPredicted RBP5.61□□□□□ -1.51
LINC01109-201ENST00000603837 NUTM2AQ8IVF1 878 aaPredicted RBP5.61□□□□□ -1.51
LINC01109-201ENST00000603837 MNS1Q8NEH6 495 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 JDP2Q8WYK2 163 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 TAF4BQ92750 862 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 USB1Q9BQ65 265 aaKnown RBP5.61□□□□□ -1.51
LINC01109-201ENST00000603837 ZBTB3Q9H5J0 574 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 ADH1BP00325 375 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 BMS1Q14692 1282 aaKnown RBP5.61□□□□□ -1.51
LINC01109-201ENST00000603837 PRPF38BQ5VTL8 546 aaKnown RBP5.61□□□□□ -1.51
LINC01109-201ENST00000603837 ANKRD7Q92527 254 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 PDLIM2Q96JY6 352 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.61□□□□□ -1.51
LINC01109-201ENST00000603837 SEZ6LQ9BYH1 1024 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 IP6K2Q9UHH9 426 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 CROCC2H7BZ55 1655 aa5.61□□□□□ -1.51
LINC01109-201ENST00000603837 NEO1Q92859 1461 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 SPDYE5A6NIY4 337 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 GOLGA6L6A8MZA4 724 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 LDHCP07864 332 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 HSP90AB1P08238 724 aaKnown RBP5.6□□□□□ -1.51
LINC01109-201ENST00000603837 FLT3P36888 993 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 HSP90AB2PQ58FF8 381 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 ZC3H12AQ5D1E8 599 aaKnown RBP5.6□□□□□ -1.51
LINC01109-201ENST00000603837 RETREG3Q86VR2 466 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 CABLES1Q8TDN4 633 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 SUFUQ9UMX1 484 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 TMA7Q9Y2S6 64 aaKnown RBP5.6□□□□□ -1.51
LINC01109-201ENST00000603837 CFAP65Q6ZU64 1925 aaKnown RBP5.6□□□□□ -1.51
LINC01109-201ENST00000603837 DNMT1P26358 1616 aaKnown RBP5.6□□□□□ -1.51
LINC01109-201ENST00000603837 PTPRGP23470 1445 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 TONSLQ96HA7 1378 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 ZNF644Q9H582 1327 aaPredicted RBP5.6□□□□□ -1.51
LINC01109-201ENST00000603837 SENP3-EIF4A1A0A087X0R7 540 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 RECKO95980 971 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 HNRNPH2P55795 449 aaKnown RBP5.6□□□□□ -1.51
LINC01109-201ENST00000603837 SRPK2P78362 688 aaKnown RBP5.6□□□□□ -1.51
LINC01109-201ENST00000603837 ZBED6P86452 979 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 LRCH2Q5VUJ6 765 aa5.6□□□□□ -1.51
LINC01109-201ENST00000603837 ZCCHC8Q6NZY4 707 aaKnown RBP5.6□□□□□ -1.51
LINC01109-201ENST00000603837 SUGP1Q8IWZ8 645 aaKnown RBP5.6□□□□□ -1.51
LINC01109-201ENST00000603837 EPRSP07814 1512 aaKnown RBP5.6□□□□□ -1.51
LINC01109-201ENST00000603837 LILRB3O75022 631 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 CASQ1P31415 396 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 SCNN1AP37088 669 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 FAM160A1Q05DH4 1040 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 PLEKHG6Q3KR16 790 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 C20orf194Q5TEA3 1177 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 SDE2Q6IQ49 451 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 JAZF1Q86VZ6 243 aa5.59□□□□□ -1.51
LINC01109-201ENST00000603837 WDR75Q8IWA0 830 aaKnown RBP5.59□□□□□ -1.51
LINC01109-201ENST00000603837 PNISRQ8TF01 805 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms