RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 WDR78Q5VTH9 848 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 APBB1IPQ7Z5R6 666 aaPredicted RBP3.86□□□□□ -1.79
NEB-218ENST00000603639 TRIM22Q8IYM9 498 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 STAMBPL1Q96FJ0 436 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 IPO5O00410 1097 aaKnown RBP3.86□□□□□ -1.79
NEB-218ENST00000603639 LCA5Q86VQ0 697 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 TBC1D5Q92609 795 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 GCC2Q8IWJ2 1684 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 NCOA2Q15596 1464 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 ATP2A1O14983 1001 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 MAP3K7CLP57077 242 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 CKAP4Q07065 602 aaKnown RBP3.86□□□□□ -1.79
NEB-218ENST00000603639 CCHCR1Q8TD31 782 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 MED4Q9NPJ6 270 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 ZC4H2Q9NQZ6 224 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 IKBKGQ9Y6K9 419 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 ZNF213O14771 459 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 CCDC171Q6TFL3 1326 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 NUP160Q12769 1436 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 RBM26Q5T8P6 1007 aaKnown RBP3.86□□□□□ -1.79
NEB-218ENST00000603639 CFDP1Q9UEE9 299 aaPredicted RBP3.86□□□□□ -1.79
NEB-218ENST00000603639 ZHX1Q9UKY1 873 aaPredicted RBP3.86□□□□□ -1.79
NEB-218ENST00000603639 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.86□□□□□ -1.79
NEB-218ENST00000603639 LOC102724159A0A0B4J2E5 919 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 EFCAB8A8MWE9 144 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 PWP2Q15269 919 aaKnown RBP3.86□□□□□ -1.79
NEB-218ENST00000603639 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.86□□□□□ -1.79
NEB-218ENST00000603639 UHRF1BP1Q6BDS2 1440 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 ADGBQ8N7X0 1667 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 PSDA5PKW4 1024 aaPredicted RBP3.86□□□□□ -1.79
NEB-218ENST00000603639 DMTNQ08495 405 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 CNTROBQ8N137 903 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 DRC3Q9H069 523 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 DNAJC25Q9H1X3 360 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 CROCCP3Q8IVE0 287 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 PARP2Q9UGN5 583 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 MAGI1Q96QZ7 1491 aaPredicted RBP3.86□□□□□ -1.79
NEB-218ENST00000603639 POLR1AO95602 1720 aaPredicted RBP3.86□□□□□ -1.79
NEB-218ENST00000603639 UBE4AQ14139 1066 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 CAPRIN2Q6IMN6 1127 aaKnown RBP3.86□□□□□ -1.79
NEB-218ENST00000603639 SLC4A10Q6U841 1118 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 ALDH1L1O75891 902 aa3.86□□□□□ -1.79
NEB-218ENST00000603639 TRIM21P19474 475 aaKnown RBP3.86□□□□□ -1.79
NEB-218ENST00000603639 BZW2Q9Y6E2 419 aaKnown RBP3.86□□□□□ -1.79
NEB-218ENST00000603639 PRIM1P49642 420 aaKnown RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 SEPT8Q92599 483 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 RMND1Q9NWS8 449 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 CFTRP13569 1480 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 RNF168Q8IYW5 571 aaPredicted RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 POTEB3A0JP26 581 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 EIF3CLB5ME19 914 aaKnown RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 POTEBQ6S5H4 581 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 DDX27Q96GQ7 796 aaKnown RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 TMED1Q13445 227 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 BICD1Q96G01 975 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 DNAI1Q9UI46 699 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 MAPK13O15264 365 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 SMTNP53814 917 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 RWDD2BP57060 319 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 ZBED9Q6R2W3 1325 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 RIOK3O14730 519 aaKnown RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 EVI5O60447 810 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 ZNF444Q8N0Y2 327 aaPredicted RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.85□□□□□ -1.79
NEB-218ENST00000603639 THOC1Q96FV9 657 aaKnown RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 COG6Q9Y2V7 657 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 BRPF1P55201 1214 aaPredicted RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 PPP4R3AQ6IN85 833 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 GBP5Q96PP8 586 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 MAP4K4O95819 1239 aaPredicted RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 CNBD1Q8NA66 436 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 CEP126Q9P2H0 1117 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 KLHL23Q8NBE8 558 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 LLPHQ9BRT6 129 aaKnown RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 RRP36Q96EU6 259 aaKnown RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 PAWRQ96IZ0 340 aaKnown RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 WASHC4Q2M389 1173 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 ZNF280CQ8ND82 737 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 ZNF569Q5MCW4 686 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 ARHGAP24Q8N264 748 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 RETREG2Q8NC44 543 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 ALDH1L2Q3SY69 923 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 TAOK2Q9UL54 1235 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 USP5P45974 858 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 SOGA3Q5TF21 947 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 NBPF14Q5TI25 921 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 GABPB2Q8TAK5 448 aaPredicted RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 TNPO1Q92973 898 aaKnown RBP3.85□□□□□ -1.79
NEB-218ENST00000603639 RAB34Q9BZG1 259 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 TSG101Q99816 390 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 SYNCQ9H7C4 482 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 TSGA10Q9BZW7 698 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 RBSNQ9H1K0 784 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 DCTPP1Q9H773 170 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 SYNJ1O43426 1573 aa3.85□□□□□ -1.79
NEB-218ENST00000603639 FCHSD1Q86WN1 690 aa3.84□□□□□ -1.79
NEB-218ENST00000603639 NRBF2Q96F24 287 aa3.84□□□□□ -1.79
NEB-218ENST00000603639 DDX19AQ9NUU7 478 aaKnown RBP3.84□□□□□ -1.79
NEB-218ENST00000603639 MYO1AQ9UBC5 1043 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms