RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 ABHD8Q96I13 439 aa13.48□□□□□ -0.25
SCNM1-207ENST00000602841 BICC1Q9H694 974 aaKnown RBP13.48□□□□□ -0.25
SCNM1-207ENST00000602841 C9orf78Q9NZ63 289 aaPredicted RBP13.48□□□□□ -0.25
SCNM1-207ENST00000602841 BCS1LQ9Y276 419 aa13.48□□□□□ -0.25
SCNM1-207ENST00000602841 SCN7AQ01118 1682 aa13.47□□□□□ -0.25
SCNM1-207ENST00000602841 CDHR2Q9BYE9 1310 aa13.47□□□□□ -0.25
SCNM1-207ENST00000602841 NTSR2O95665 410 aa13.47□□□□□ -0.25
SCNM1-207ENST00000602841 CSF1RP07333 972 aa13.47□□□□□ -0.25
SCNM1-207ENST00000602841 GYS1P13807 737 aa13.47□□□□□ -0.25
SCNM1-207ENST00000602841 SSFA2P28290 1259 aa13.47□□□□□ -0.25
SCNM1-207ENST00000602841 RGS19P49795 217 aa13.47□□□□□ -0.25
SCNM1-207ENST00000602841 HSP90AB3PQ58FF7 597 aa13.47□□□□□ -0.25
SCNM1-207ENST00000602841 TRAPPC3LQ5T215 181 aa13.47□□□□□ -0.25
SCNM1-207ENST00000602841 TBC1D9BQ66K14 1250 aa13.47□□□□□ -0.25
SCNM1-207ENST00000602841 UBE3BQ7Z3V4 1068 aa13.47□□□□□ -0.25
SCNM1-207ENST00000602841 FAM89AQ96GI7 184 aa13.47□□□□□ -0.25
SCNM1-207ENST00000602841 PDZRN3Q9UPQ7 1066 aa13.47□□□□□ -0.25
SCNM1-207ENST00000602841 PDE4AP27815 886 aa13.46□□□□□ -0.25
SCNM1-207ENST00000602841 TM4SF1P30408 202 aa13.46□□□□□ -0.25
SCNM1-207ENST00000602841 AK7Q96M32 723 aa13.46□□□□□ -0.25
SCNM1-207ENST00000602841 NOP58Q9Y2X3 529 aaKnown RBP13.46□□□□□ -0.25
SCNM1-207ENST00000602841 C4AP0C0L4 1744 aa13.46□□□□□ -0.25
SCNM1-207ENST00000602841 ANKRD36CQ5JPF3 1778 aa13.45□□□□□ -0.26
SCNM1-207ENST00000602841 NUCB1Q02818 461 aa13.45□□□□□ -0.26
SCNM1-207ENST00000602841 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.45□□□□□ -0.26
SCNM1-207ENST00000602841 A0A0G2JLW4 131 aa13.44□□□□□ -0.26
SCNM1-207ENST00000602841 PHF14O94880 888 aa13.44□□□□□ -0.26
SCNM1-207ENST00000602841 PARP10Q53GL7 1025 aa13.44□□□□□ -0.26
SCNM1-207ENST00000602841 GCC1Q96CN9 775 aa13.44□□□□□ -0.26
SCNM1-207ENST00000602841 NIP7Q9Y221 180 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCNM1-207ENST00000602841 PTPN12Q05209 780 aaKnown RBP13.43□□□□□ -0.26
SCNM1-207ENST00000602841 NFIXQ14938 502 aa13.43□□□□□ -0.26
SCNM1-207ENST00000602841 RTL5Q5HYW3 569 aaPredicted RBP13.43□□□□□ -0.26
SCNM1-207ENST00000602841 SLC10A5Q5PT55 438 aa13.43□□□□□ -0.26
SCNM1-207ENST00000602841 LMBR1LQ6UX01 489 aa13.43□□□□□ -0.26
SCNM1-207ENST00000602841 AFDNP55196 1824 aaKnown RBP13.43□□□□□ -0.26
SCNM1-207ENST00000602841 SRGAP3O43295 1099 aa13.42□□□□□ -0.26
SCNM1-207ENST00000602841 TGFB2P61812 414 aa13.42□□□□□ -0.26
SCNM1-207ENST00000602841 C3orf67Q6ZVT6 689 aa13.42□□□□□ -0.26
SCNM1-207ENST00000602841 TTLL11Q8NHH1 800 aa13.42□□□□□ -0.26
SCNM1-207ENST00000602841 MKRN1Q9UHC7 482 aaKnown RBP13.42□□□□□ -0.26
SCNM1-207ENST00000602841 PA2G4Q9UQ80 394 aaKnown RBP13.42□□□□□ -0.26
SCNM1-207ENST00000602841 SALL3Q9BXA9 1300 aa13.41□□□□□ -0.26
SCNM1-207ENST00000602841 RFC4P35249 363 aa13.41□□□□□ -0.26
SCNM1-207ENST00000602841 CTCFP49711 727 aaPredicted RBP13.41□□□□□ -0.26
SCNM1-207ENST00000602841 KLHDC4Q8TBB5 520 aa13.41□□□□□ -0.26
SCNM1-207ENST00000602841 UTP14AQ9BVJ6 771 aaKnown RBP13.41□□□□□ -0.26
SCNM1-207ENST00000602841 COPRSQ9NQ92 184 aa13.41□□□□□ -0.26
SCNM1-207ENST00000602841 TRMT112Q9UI30 125 aaKnown RBP13.41□□□□□ -0.26
SCNM1-207ENST00000602841 EXOC6BQ9Y2D4 811 aa13.41□□□□□ -0.26
SCNM1-207ENST00000602841 COL4A1P02462 1669 aa13.4□□□□□ -0.26
SCNM1-207ENST00000602841 IRS4O14654 1257 aaPredicted RBP13.4□□□□□ -0.26
SCNM1-207ENST00000602841 ZPR1O75312 459 aa13.4□□□□□ -0.26
SCNM1-207ENST00000602841 SASH1O94885 1247 aa13.4□□□□□ -0.26
SCNM1-207ENST00000602841 LBX1P52954 281 aa13.4□□□□□ -0.26
SCNM1-207ENST00000602841 DDR1Q08345 913 aa13.4□□□□□ -0.26
SCNM1-207ENST00000602841 ERFEQ4G0M1 354 aa13.4□□□□□ -0.26
SCNM1-207ENST00000602841 CHD1LQ86WJ1 897 aa13.4□□□□□ -0.26
SCNM1-207ENST00000602841 NUTM1Q86Y26 1132 aa13.4□□□□□ -0.26
SCNM1-207ENST00000602841 RNF181Q9P0P0 153 aa13.4□□□□□ -0.26
SCNM1-207ENST00000602841 HDAC5Q9UQL6 1122 aa13.4□□□□□ -0.26
SCNM1-207ENST00000602841 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
SCNM1-207ENST00000602841 ABCC12Q96J65 1359 aa13.4□□□□□ -0.26
SCNM1-207ENST00000602841 SH3TC1Q8TE82 1336 aa13.39□□□□□ -0.27
SCNM1-207ENST00000602841 SMARCA5O60264 1052 aaPredicted RBP13.39□□□□□ -0.27
SCNM1-207ENST00000602841 PDE8AO60658 829 aa13.39□□□□□ -0.27
SCNM1-207ENST00000602841 HMMRO75330 724 aa13.39□□□□□ -0.27
SCNM1-207ENST00000602841 HCLS1P14317 486 aaPredicted RBP13.39□□□□□ -0.27
SCNM1-207ENST00000602841 DPEP1P16444 411 aa13.39□□□□□ -0.27
SCNM1-207ENST00000602841 HMGB2P26583 209 aaKnown RBP13.39□□□□□ -0.27
SCNM1-207ENST00000602841 BICDL1Q6ZP65 573 aa13.39□□□□□ -0.27
SCNM1-207ENST00000602841 ATG9AQ7Z3C6 839 aa13.39□□□□□ -0.27
SCNM1-207ENST00000602841 NPM2Q86SE8 214 aaKnown RBP13.39□□□□□ -0.27
SCNM1-207ENST00000602841 OTUD7AQ8TE49 926 aaPredicted RBP13.39□□□□□ -0.27
SCNM1-207ENST00000602841 DDX60Q8IY21 1712 aaKnown RBP13.39□□□□□ -0.27
SCNM1-207ENST00000602841 KIAA1551Q9HCM1 1747 aa13.39□□□□□ -0.27
SCNM1-207ENST00000602841 POLRMTO00411 1230 aaKnown RBP13.38□□□□□ -0.27
SCNM1-207ENST00000602841 KCNA3P22001 575 aa13.38□□□□□ -0.27
SCNM1-207ENST00000602841 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
SCNM1-207ENST00000602841 ANKRD45Q5TZF3 282 aa13.38□□□□□ -0.27
SCNM1-207ENST00000602841 CCDC85CA6NKD9 419 aa13.37□□□□□ -0.27
SCNM1-207ENST00000602841 FAM177BA6PVY3 158 aa13.37□□□□□ -0.27
SCNM1-207ENST00000602841 SURF6O75683 361 aaKnown RBP13.37□□□□□ -0.27
SCNM1-207ENST00000602841 MMP10P09238 476 aa13.37□□□□□ -0.27
SCNM1-207ENST00000602841 VEGFAP15692 232 aaPredicted RBP13.37□□□□□ -0.27
SCNM1-207ENST00000602841 CTSWP56202 376 aa13.37□□□□□ -0.27
SCNM1-207ENST00000602841 RHPN1Q8TCX5 695 aa13.37□□□□□ -0.27
SCNM1-207ENST00000602841 SETDB2Q96T68 719 aa13.37□□□□□ -0.27
SCNM1-207ENST00000602841 PUS3Q9BZE2 481 aaKnown RBP13.37□□□□□ -0.27
SCNM1-207ENST00000602841 LNPKQ9C0E8 428 aa13.37□□□□□ -0.27
SCNM1-207ENST00000602841 GREM2Q9H772 168 aa13.37□□□□□ -0.27
SCNM1-207ENST00000602841 CREBZFQ9NS37 354 aa13.37□□□□□ -0.27
SCNM1-207ENST00000602841 RTL9Q8NET4 1388 aa13.36□□□□□ -0.27
SCNM1-207ENST00000602841 RAB11FIP3O75154 756 aa13.36□□□□□ -0.27
SCNM1-207ENST00000602841 PRR5LQ6MZQ0 368 aa13.36□□□□□ -0.27
SCNM1-207ENST00000602841 PLEKHM2Q8IWE5 1019 aa13.36□□□□□ -0.27
SCNM1-207ENST00000602841 ZNF594Q96JF6 807 aaPredicted RBP13.36□□□□□ -0.27
SCNM1-207ENST00000602841 TNRC6CQ9HCJ0 1690 aaKnown RBP13.35□□□□□ -0.27
SCNM1-207ENST00000602841 KLRG2A4D1S0 409 aaPredicted RBP13.35□□□□□ -0.27
SCNM1-207ENST00000602841 SERPINB2P05120 415 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms