RNA–Protein interactions for RNA: ENST00000601133.5

FARP1-233, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-233ENST00000601133 CNKSR1Q969H4 720 aa9.59□□□□□ -0.87
FARP1-233ENST00000601133 TRIM52Q96A61 297 aa9.59□□□□□ -0.87
FARP1-233ENST00000601133 IQSEC3Q9UPP2 1182 aaPredicted RBP9.59□□□□□ -0.87
FARP1-233ENST00000601133 SPINT1O43278 529 aa9.58□□□□□ -0.88
FARP1-233ENST00000601133 PSMA6P60900 246 aaKnown RBP9.58□□□□□ -0.88
FARP1-233ENST00000601133 FAM26DQ5JW98 314 aa9.58□□□□□ -0.88
FARP1-233ENST00000601133 ZSCAN29Q8IWY8 852 aaPredicted RBP9.58□□□□□ -0.88
FARP1-233ENST00000601133 RGL4Q8IZJ4 473 aa9.58□□□□□ -0.88
FARP1-233ENST00000601133 HRH3Q9Y5N1 445 aa9.58□□□□□ -0.88
FARP1-233ENST00000601133 PTSQ03393 145 aa9.57□□□□□ -0.88
FARP1-233ENST00000601133 TMC7Q7Z402 723 aa9.57□□□□□ -0.88
FARP1-233ENST00000601133 NGLY1Q96IV0 654 aa9.57□□□□□ -0.88
FARP1-233ENST00000601133 ESYT1Q9BSJ8 1104 aa9.57□□□□□ -0.88
FARP1-233ENST00000601133 LRFN2Q9ULH4 789 aa9.57□□□□□ -0.88
FARP1-233ENST00000601133 MLH3Q9UHC1 1453 aa9.57□□□□□ -0.88
FARP1-233ENST00000601133 CASKIN1Q8WXD9 1431 aa9.56□□□□□ -0.88
FARP1-233ENST00000601133 AGLP35573 1532 aa9.56□□□□□ -0.88
FARP1-233ENST00000601133 MROH2AA6NES4 1674 aa9.56□□□□□ -0.88
FARP1-233ENST00000601133 CTSOP43234 321 aaPredicted RBP9.56□□□□□ -0.88
FARP1-233ENST00000601133 EIF1AXP47813 144 aaKnown RBP9.56□□□□□ -0.88
FARP1-233ENST00000601133 RELBQ01201 579 aa9.56□□□□□ -0.88
FARP1-233ENST00000601133 KRT76Q01546 638 aa9.56□□□□□ -0.88
FARP1-233ENST00000601133 STAG2Q8N3U4 1231 aa9.56□□□□□ -0.88
FARP1-233ENST00000601133 ZDHHC1Q8WTX9 485 aa9.56□□□□□ -0.88
FARP1-233ENST00000601133 CCDC87Q9NVE4 849 aa9.56□□□□□ -0.88
FARP1-233ENST00000601133 SUPT6HQ7KZ85 1726 aaKnown RBP9.56□□□□□ -0.88
FARP1-233ENST00000601133 UHRF1BP1Q6BDS2 1440 aa9.56□□□□□ -0.88
FARP1-233ENST00000601133 SAMD9LQ8IVG5 1584 aa9.55□□□□□ -0.88
FARP1-233ENST00000601133 FYCO1Q9BQS8 1478 aa9.55□□□□□ -0.88
FARP1-233ENST00000601133 EML1O00423 815 aa9.55□□□□□ -0.88
FARP1-233ENST00000601133 P4HBP07237 508 aaKnown RBP9.55□□□□□ -0.88
FARP1-233ENST00000601133 CEBPAP49715 358 aaPredicted RBP9.55□□□□□ -0.88
FARP1-233ENST00000601133 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.55□□□□□ -0.883e-9■■■■□ 22.2
FARP1-233ENST00000601133 ZNF326Q5BKZ1 582 aaKnown RBP9.55□□□□□ -0.88
FARP1-233ENST00000601133 AFAP1Q8N556 730 aa9.55□□□□□ -0.88
FARP1-233ENST00000601133 SPATA32Q96LK8 384 aa9.55□□□□□ -0.88
FARP1-233ENST00000601133 RBCK1Q9BYM8 510 aa9.55□□□□□ -0.88
FARP1-233ENST00000601133 FHDC1Q9C0D6 1143 aaPredicted RBP9.55□□□□□ -0.88
FARP1-233ENST00000601133 PARP3Q9Y6F1 533 aa9.55□□□□□ -0.88
FARP1-233ENST00000601133 TRAPPC8Q9Y2L5 1435 aa9.55□□□□□ -0.88
FARP1-233ENST00000601133 CDK2AP1O14519 115 aa9.54□□□□□ -0.88
FARP1-233ENST00000601133 ZBTB39O15060 712 aa9.54□□□□□ -0.88
FARP1-233ENST00000601133 FZD6O60353 706 aa9.54□□□□□ -0.88
FARP1-233ENST00000601133 ZC3H6P61129 1189 aaKnown RBP9.54□□□□□ -0.88
FARP1-233ENST00000601133 CLN3Q13286 438 aa9.54□□□□□ -0.88
FARP1-233ENST00000601133 ATCAYQ86WG3 371 aa9.54□□□□□ -0.88
FARP1-233ENST00000601133 ZNF295-AS1Q8N0V1 137 aa9.54□□□□□ -0.88
FARP1-233ENST00000601133 INSM2Q96T92 566 aaPredicted RBP9.54□□□□□ -0.88
FARP1-233ENST00000601133 ZNF395Q9H8N7 513 aaPredicted RBP9.54□□□□□ -0.88
FARP1-233ENST00000601133 STIM2Q9P246 746 aa9.54□□□□□ -0.88
FARP1-233ENST00000601133 SYCP2Q9BX26 1530 aa9.54□□□□□ -0.88
FARP1-233ENST00000601133 MEN1O00255 615 aa9.53□□□□□ -0.88
FARP1-233ENST00000601133 NDUFB5O43674 189 aa9.53□□□□□ -0.88
FARP1-233ENST00000601133 SMARCA5O60264 1052 aaPredicted RBP9.53□□□□□ -0.88
FARP1-233ENST00000601133 VAMP1P23763 118 aa9.53□□□□□ -0.88
FARP1-233ENST00000601133 POTEAQ6S8J7 498 aa9.53□□□□□ -0.88
FARP1-233ENST00000601133 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.53□□□□□ -0.88
FARP1-233ENST00000601133 BRPF3Q9ULD4 1205 aa9.53□□□□□ -0.88
FARP1-233ENST00000601133 CLTCQ00610 1675 aaKnown RBP9.52□□□□□ -0.89
FARP1-233ENST00000601133 SERTM1A2A2V5 107 aa9.52□□□□□ -0.89
FARP1-233ENST00000601133 PTGIRP43119 386 aa9.52□□□□□ -0.89
FARP1-233ENST00000601133 CENPCQ03188 943 aa9.52□□□□□ -0.89
FARP1-233ENST00000601133 AAMPQ13685 434 aa9.52□□□□□ -0.89
FARP1-233ENST00000601133 EAPPQ56P03 285 aaPredicted RBP9.52□□□□□ -0.89
FARP1-233ENST00000601133 CCDC155Q8N6L0 562 aa9.52□□□□□ -0.89
FARP1-233ENST00000601133 UBXN4Q92575 508 aa9.52□□□□□ -0.89
FARP1-233ENST00000601133 MYO19Q96H55 970 aa9.52□□□□□ -0.89
FARP1-233ENST00000601133 CABP1Q9NZU7 370 aa9.52□□□□□ -0.89
FARP1-233ENST00000601133 INO80Q9ULG1 1556 aaPredicted RBP9.52□□□□□ -0.89
FARP1-233ENST00000601133 ZNF232Q9UNY5 417 aa9.52□□□□□ -0.89
FARP1-233ENST00000601133 CHMP3Q9Y3E7 222 aa9.52□□□□□ -0.89
FARP1-233ENST00000601133 HCN4Q9Y3Q4 1203 aa9.52□□□□□ -0.89
FARP1-233ENST00000601133 FAM181BA6NEQ2 426 aa9.51□□□□□ -0.89
FARP1-233ENST00000601133 NCLP19338 710 aaKnown RBP9.51□□□□□ -0.89
FARP1-233ENST00000601133 SF3A1Q15459 793 aaKnown RBP9.51□□□□□ -0.89
FARP1-233ENST00000601133 TEAD4Q15561 434 aa9.51□□□□□ -0.89
FARP1-233ENST00000601133 NBPF15Q8N660 670 aa9.51□□□□□ -0.89
FARP1-233ENST00000601133 ZNF142P52746 1687 aaPredicted RBP9.51□□□□□ -0.89
FARP1-233ENST00000601133 ADGBQ8N7X0 1667 aa9.51□□□□□ -0.89
FARP1-233ENST00000601133 ATP7AQ04656 1500 aa9.51□□□□□ -0.89
FARP1-233ENST00000601133 CNTLNQ9NXG0 1405 aa9.5□□□□□ -0.89
FARP1-233ENST00000601133 SLC35F4A4IF30 521 aa9.5□□□□□ -0.89
FARP1-233ENST00000601133 TREHO43280 583 aa9.5□□□□□ -0.89
FARP1-233ENST00000601133 NOS2P35228 1153 aa9.5□□□□□ -0.89
FARP1-233ENST00000601133 ALDH16A1Q8IZ83 802 aa9.5□□□□□ -0.89
FARP1-233ENST00000601133 TMC1Q8TDI8 760 aa9.5□□□□□ -0.89
FARP1-233ENST00000601133 L3MBTL2Q969R5 705 aa9.5□□□□□ -0.89
FARP1-233ENST00000601133 KLK14Q9P0G3 267 aa9.5□□□□□ -0.89
FARP1-233ENST00000601133 PLXNC1O60486 1568 aa9.5□□□□□ -0.89
FARP1-233ENST00000601133 MYO3AQ8NEV4 1616 aa9.49□□□□□ -0.89
FARP1-233ENST00000601133 GPR182O15218 404 aa9.49□□□□□ -0.89
FARP1-233ENST00000601133 RECKO95980 971 aa9.49□□□□□ -0.89
FARP1-233ENST00000601133 IGHA2P01877 340 aa9.49□□□□□ -0.89
FARP1-233ENST00000601133 HIRAP54198 1017 aaPredicted RBP9.49□□□□□ -0.89
FARP1-233ENST00000601133 FMR1Q06787 632 aaKnown RBP eCLIP9.49□□□□□ -0.89
FARP1-233ENST00000601133 DGKZQ13574 1117 aa9.49□□□□□ -0.89
FARP1-233ENST00000601133 COL19A1Q14993 1142 aa9.49□□□□□ -0.89
FARP1-233ENST00000601133 ETFBKMTQ8IXQ9 262 aa9.49□□□□□ -0.89
FARP1-233ENST00000601133 POLMQ9NP87 494 aaPredicted RBP9.49□□□□□ -0.89
FARP1-233ENST00000601133 PTPRTO14522 1441 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms