RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 PDE8AO60658 829 aa17.18■□□□□ 0.34
ARHGEF1-222ENST00000600517 IARSP41252 1262 aaKnown RBP17.18■□□□□ 0.34
ARHGEF1-222ENST00000600517 GCKRQ14397 625 aa17.18■□□□□ 0.34
ARHGEF1-222ENST00000600517 DPY19L2Q6NUT2 758 aa17.18■□□□□ 0.34
ARHGEF1-222ENST00000600517 SLC51AQ86UW1 340 aa17.18■□□□□ 0.34
ARHGEF1-222ENST00000600517 CACNA1SQ13698 1873 aa17.17■□□□□ 0.34
ARHGEF1-222ENST00000600517 CELF1Q92879 486 aaKnown RBP17.17■□□□□ 0.34
ARHGEF1-222ENST00000600517 RRAGCQ9HB90 399 aa17.17■□□□□ 0.34
ARHGEF1-222ENST00000600517 F6X3S4 739 aa17.16■□□□□ 0.34
ARHGEF1-222ENST00000600517 RPS8P62241 208 aaKnown RBP17.16■□□□□ 0.34
ARHGEF1-222ENST00000600517 BEND3Q5T5X7 828 aa17.16■□□□□ 0.34
ARHGEF1-222ENST00000600517 MRPL50Q8N5N7 158 aaKnown RBP17.16■□□□□ 0.34
ARHGEF1-222ENST00000600517 RTFDC1Q9BY42 306 aaPredicted RBP17.16■□□□□ 0.34
ARHGEF1-222ENST00000600517 CCDC152Q4G0S7 254 aa17.15■□□□□ 0.34
ARHGEF1-222ENST00000600517 UBE3BQ7Z3V4 1068 aa17.15■□□□□ 0.34
ARHGEF1-222ENST00000600517 MPNDQ8N594 471 aa17.15■□□□□ 0.34
ARHGEF1-222ENST00000600517 SSH1Q8WYL5 1049 aa17.15■□□□□ 0.34
ARHGEF1-222ENST00000600517 VPS33BQ9H267 617 aa17.15■□□□□ 0.34
ARHGEF1-222ENST00000600517 DDX60Q8IY21 1712 aaKnown RBP17.15■□□□□ 0.34
ARHGEF1-222ENST00000600517 TOMM70O94826 608 aa17.14■□□□□ 0.33
ARHGEF1-222ENST00000600517 CT47B1P0C2W7 299 aaPredicted RBP17.14■□□□□ 0.33
ARHGEF1-222ENST00000600517 CASP7P55210 303 aa17.14■□□□□ 0.33
ARHGEF1-222ENST00000600517 DPP8Q6V1X1 898 aaPredicted RBP17.14■□□□□ 0.33
ARHGEF1-222ENST00000600517 SUPT20HQ8NEM7 779 aa17.14■□□□□ 0.33
ARHGEF1-222ENST00000600517 JDP2Q8WYK2 163 aa17.14■□□□□ 0.33
ARHGEF1-222ENST00000600517 SEC31BQ9NQW1 1179 aa17.14■□□□□ 0.33
ARHGEF1-222ENST00000600517 CACNA1FO60840 1977 aa17.14■□□□□ 0.33
ARHGEF1-222ENST00000600517 LAMB2P55268 1798 aa17.14■□□□□ 0.33
ARHGEF1-222ENST00000600517 FZD9O00144 591 aa17.13■□□□□ 0.33
ARHGEF1-222ENST00000600517 VEGFAP15692 232 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF1-222ENST00000600517 CTSWP56202 376 aa17.13■□□□□ 0.33
ARHGEF1-222ENST00000600517 ALDH1L2Q3SY69 923 aa17.13■□□□□ 0.33
ARHGEF1-222ENST00000600517 TTLL11Q8NHH1 800 aa17.13■□□□□ 0.33
ARHGEF1-222ENST00000600517 PLA2G12BQ9BX93 195 aa17.13■□□□□ 0.33
ARHGEF1-222ENST00000600517 POTECB2RU33 542 aa17.12■□□□□ 0.33
ARHGEF1-222ENST00000600517 DDNO94850 711 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF1-222ENST00000600517 LARGE2Q8N3Y3 721 aa17.12■□□□□ 0.33
ARHGEF1-222ENST00000600517 CCDC88AQ3V6T2 1871 aa17.12■□□□□ 0.33
ARHGEF1-222ENST00000600517 CCDC85AQ96PX6 553 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF1-222ENST00000600517 PTPRCP08575 1304 aa17.11■□□□□ 0.33
ARHGEF1-222ENST00000600517 DICER1Q9UPY3 1922 aaKnown RBP17.11■□□□□ 0.33
ARHGEF1-222ENST00000600517 TIAM2Q8IVF5 1701 aa17.1■□□□□ 0.33
ARHGEF1-222ENST00000600517 PPIP5K2O43314 1243 aa17.1■□□□□ 0.33
ARHGEF1-222ENST00000600517 ALDH1L1O75891 902 aa17.1■□□□□ 0.33
ARHGEF1-222ENST00000600517 CSF1RP07333 972 aa17.1■□□□□ 0.33
ARHGEF1-222ENST00000600517 C16orf71Q8IYS4 520 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF1-222ENST00000600517 SRCIN1Q9C0H9 1055 aa17.1■□□□□ 0.33
ARHGEF1-222ENST00000600517 NSFL1CQ9UNZ2 370 aaKnown RBP17.1■□□□□ 0.33
ARHGEF1-222ENST00000600517 RTL9Q8NET4 1388 aa17.1■□□□□ 0.33
ARHGEF1-222ENST00000600517 GPSM2P81274 684 aa17.09■□□□□ 0.33
ARHGEF1-222ENST00000600517 HNRNPUQ00839 825 aaKnown RBP eCLIP17.09■□□□□ 0.33
ARHGEF1-222ENST00000600517 KIAA2012Q0VF49 1180 aa17.09■□□□□ 0.33
ARHGEF1-222ENST00000600517 AOC3Q16853 763 aa17.09■□□□□ 0.33
ARHGEF1-222ENST00000600517 SLC4A10Q6U841 1118 aa17.09■□□□□ 0.33
ARHGEF1-222ENST00000600517 ANKRD18AQ8IVF6 992 aa17.09■□□□□ 0.33
ARHGEF1-222ENST00000600517 RBM46Q8TBY0 533 aaKnown RBP17.09■□□□□ 0.33
ARHGEF1-222ENST00000600517 L3MBTL3Q96JM7 780 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF1-222ENST00000600517 GREM2Q9H772 168 aa17.09■□□□□ 0.33
ARHGEF1-222ENST00000600517 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
ARHGEF1-222ENST00000600517 COL4A1P02462 1669 aa17.08■□□□□ 0.32
ARHGEF1-222ENST00000600517 GRM8O00222 908 aa17.08■□□□□ 0.32
ARHGEF1-222ENST00000600517 BRPF1P55201 1214 aaPredicted RBP17.08■□□□□ 0.32
ARHGEF1-222ENST00000600517 EIF6P56537 245 aaKnown RBP17.08■□□□□ 0.32
ARHGEF1-222ENST00000600517 NIM1KQ8IY84 436 aa17.08■□□□□ 0.32
ARHGEF1-222ENST00000600517 GPC2Q8N158 579 aa17.08■□□□□ 0.32
ARHGEF1-222ENST00000600517 CDC5LQ99459 802 aaKnown RBP17.08■□□□□ 0.32
ARHGEF1-222ENST00000600517 BCL2L13Q9BXK5 485 aa17.08■□□□□ 0.32
ARHGEF1-222ENST00000600517 SMC4Q9NTJ3 1288 aa17.08■□□□□ 0.32
ARHGEF1-222ENST00000600517 PODXL2Q9NZ53 605 aa17.08■□□□□ 0.32
ARHGEF1-222ENST00000600517 COL4A5P29400 1685 aa17.07■□□□□ 0.32
ARHGEF1-222ENST00000600517 FOXO4P98177 505 aa17.07■□□□□ 0.32
ARHGEF1-222ENST00000600517 C9orf78Q9NZ63 289 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF1-222ENST00000600517 POLLQ9UGP5 575 aa17.07■□□□□ 0.32
ARHGEF1-222ENST00000600517 ZNRF3Q9ULT6 936 aa17.07■□□□□ 0.32
ARHGEF1-222ENST00000600517 TAF1P21675 1872 aa17.07■□□□□ 0.32
ARHGEF1-222ENST00000600517 WASHC4Q2M389 1173 aa17.06■□□□□ 0.32
ARHGEF1-222ENST00000600517 TBC1D16Q8TBP0 767 aa17.06■□□□□ 0.32
ARHGEF1-222ENST00000600517 BSDC1Q9NW68 430 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF1-222ENST00000600517 WDR90Q96KV7 1748 aa17.06■□□□□ 0.32
ARHGEF1-222ENST00000600517 LRRC37AA6NMS7 1700 aa17.05■□□□□ 0.32
ARHGEF1-222ENST00000600517 IQCA1LA6NCM1 817 aa17.05■□□□□ 0.32
ARHGEF1-222ENST00000600517 C6orf229H3BNL8 230 aa17.05■□□□□ 0.32
ARHGEF1-222ENST00000600517 RARSP54136 660 aaKnown RBP17.05■□□□□ 0.32
ARHGEF1-222ENST00000600517 FSTL1Q12841 308 aa17.05■□□□□ 0.32
ARHGEF1-222ENST00000600517 UTYO14607 1347 aa17.04■□□□□ 0.32
ARHGEF1-222ENST00000600517 DUOX1Q9NRD9 1551 aa17.04■□□□□ 0.32
ARHGEF1-222ENST00000600517 HSPA6P17066 643 aa17.04■□□□□ 0.32
ARHGEF1-222ENST00000600517 ITGA6P23229 1130 aa17.04■□□□□ 0.32
ARHGEF1-222ENST00000600517 EPHA10Q5JZY3 1008 aa17.04■□□□□ 0.32
ARHGEF1-222ENST00000600517 EYA3Q99504 573 aa17.04■□□□□ 0.32
ARHGEF1-222ENST00000600517 ANKIB1Q9P2G1 1089 aa17.04■□□□□ 0.32
ARHGEF1-222ENST00000600517 MINPP1Q9UNW1 487 aa17.04■□□□□ 0.32
ARHGEF1-222ENST00000600517 XDHP47989 1333 aa17.03■□□□□ 0.32
ARHGEF1-222ENST00000600517 CXCL9Q07325 125 aa17.03■□□□□ 0.32
ARHGEF1-222ENST00000600517 FAM161AQ3B820 660 aa17.03■□□□□ 0.32
ARHGEF1-222ENST00000600517 SMC1BQ8NDV3 1235 aa17.03■□□□□ 0.32
ARHGEF1-222ENST00000600517 ZC3H12CQ9C0D7 883 aaKnown RBP17.03■□□□□ 0.32
ARHGEF1-222ENST00000600517 TAF1DQ9H5J8 278 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF1-222ENST00000600517 NOB1Q9ULX3 412 aaKnown RBP17.03■□□□□ 0.32
ARHGEF1-222ENST00000600517 GJA3Q9Y6H8 435 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms