RNA–Protein interactions for RNA: ENST00000599687.1

SNRNP70-208, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-208ENST00000599687 CASZ1Q86V15 1759 aa11.81□□□□□ -0.52
SNRNP70-208ENST00000599687 IGSF1Q8N6C5 1336 aa11.81□□□□□ -0.52
SNRNP70-208ENST00000599687 LY75O60449 1722 aa11.8□□□□□ -0.52
SNRNP70-208ENST00000599687 PAPPAQ13219 1627 aa11.8□□□□□ -0.52
SNRNP70-208ENST00000599687 DDX11L8A8MPP1 907 aa11.8□□□□□ -0.52
SNRNP70-208ENST00000599687 SLC27A3Q5K4L6 730 aa11.8□□□□□ -0.52
SNRNP70-208ENST00000599687 TSKSQ9UJT2 592 aa11.8□□□□□ -0.52
SNRNP70-208ENST00000599687 NDUFB9Q9Y6M9 179 aa11.8□□□□□ -0.52
SNRNP70-208ENST00000599687 KCNQ4P56696 695 aa11.79□□□□□ -0.52
SNRNP70-208ENST00000599687 CC2D1BQ5T0F9 858 aaKnown RBP11.79□□□□□ -0.52
SNRNP70-208ENST00000599687 SPON1Q9HCB6 807 aa11.79□□□□□ -0.52
SNRNP70-208ENST00000599687 TOGARAM1Q9Y4F4 1720 aa11.79□□□□□ -0.52
SNRNP70-208ENST00000599687 ITGB4P16144 1822 aa11.79□□□□□ -0.52
SNRNP70-208ENST00000599687 IL13P35225 146 aa11.78□□□□□ -0.52
SNRNP70-208ENST00000599687 GJA5P36382 358 aa11.78□□□□□ -0.52
SNRNP70-208ENST00000599687 MTHFSP49914 203 aa11.78□□□□□ -0.52
SNRNP70-208ENST00000599687 ZNF827Q17R98 1081 aa11.78□□□□□ -0.52
SNRNP70-208ENST00000599687 MPRIPQ6WCQ1 1025 aa11.78□□□□□ -0.52
SNRNP70-208ENST00000599687 IFNL2Q8IZJ0 200 aa11.78□□□□□ -0.52
SNRNP70-208ENST00000599687 PLEKHG2Q9H7P9 1386 aa11.78□□□□□ -0.52
SNRNP70-208ENST00000599687 NPC1L1Q9UHC9 1359 aa11.78□□□□□ -0.52
SNRNP70-208ENST00000599687 GPR37L1O60883 481 aa11.77□□□□□ -0.53
SNRNP70-208ENST00000599687 IGSF3O75054 1194 aa11.77□□□□□ -0.53
SNRNP70-208ENST00000599687 PHKG2P15735 406 aa11.77□□□□□ -0.53
SNRNP70-208ENST00000599687 SULF1Q8IWU6 871 aa11.77□□□□□ -0.53
SNRNP70-208ENST00000599687 RNF40O75150 1001 aa11.76□□□□□ -0.53
SNRNP70-208ENST00000599687 ZBTB7AO95365 584 aa11.76□□□□□ -0.53
SNRNP70-208ENST00000599687 PLEKHO1Q53GL0 409 aaPredicted RBP11.76□□□□□ -0.53
SNRNP70-208ENST00000599687 PIGBQ92521 554 aa11.76□□□□□ -0.53
SNRNP70-208ENST00000599687 PPP1R12CQ9BZL4 782 aa11.76□□□□□ -0.53
SNRNP70-208ENST00000599687 HMX1Q9NP08 348 aaPredicted RBP11.76□□□□□ -0.53
SNRNP70-208ENST00000599687 CCNL1Q9UK58 526 aaPredicted RBP11.76□□□□□ -0.53
SNRNP70-208ENST00000599687 C3orf80F5H4A9 247 aa11.75□□□□□ -0.53
SNRNP70-208ENST00000599687 SULT6B1Q6IMI4 303 aa11.75□□□□□ -0.53
SNRNP70-208ENST00000599687 QSER1Q2KHR3 1735 aa11.74□□□□□ -0.53
SNRNP70-208ENST00000599687 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
SNRNP70-208ENST00000599687 VAC14Q08AM6 782 aa11.74□□□□□ -0.53
SNRNP70-208ENST00000599687 CNGB1Q14028 1251 aaPredicted RBP11.74□□□□□ -0.53
SNRNP70-208ENST00000599687 AMOTQ4VCS5 1084 aa11.74□□□□□ -0.53
SNRNP70-208ENST00000599687 PKDCCQ504Y2 493 aa11.74□□□□□ -0.53
SNRNP70-208ENST00000599687 ZNF516Q92618 1163 aa11.74□□□□□ -0.53
SNRNP70-208ENST00000599687 SMARCC1Q92922 1105 aaPredicted RBP11.74□□□□□ -0.53
SNRNP70-208ENST00000599687 MTFR1LQ9H019 292 aa11.74□□□□□ -0.53
SNRNP70-208ENST00000599687 KDRP35968 1356 aa11.74□□□□□ -0.53
SNRNP70-208ENST00000599687 PALLDQ8WX93 1383 aa11.74□□□□□ -0.53
SNRNP70-208ENST00000599687 WASHC4Q2M389 1173 aa11.73□□□□□ -0.53
SNRNP70-208ENST00000599687 PRPF38BQ5VTL8 546 aaKnown RBP11.73□□□□□ -0.53
SNRNP70-208ENST00000599687 PNPLA7Q6ZV29 1317 aa11.73□□□□□ -0.53
SNRNP70-208ENST00000599687 TRIM34Q9BYJ4 488 aa11.73□□□□□ -0.53
SNRNP70-208ENST00000599687 TMOD3Q9NYL9 352 aa11.73□□□□□ -0.53
SNRNP70-208ENST00000599687 PPP1R1BQ9UD71 204 aaPredicted RBP11.73□□□□□ -0.53
SNRNP70-208ENST00000599687 IVNS1ABPQ9Y6Y0 642 aa11.73□□□□□ -0.53
SNRNP70-208ENST00000599687 TUBGCP6Q96RT7 1819 aa11.72□□□□□ -0.53
SNRNP70-208ENST00000599687 DIAPH1O60610 1272 aaKnown RBP11.72□□□□□ -0.53
SNRNP70-208ENST00000599687 HSP90AB1P08238 724 aaKnown RBP11.72□□□□□ -0.53
SNRNP70-208ENST00000599687 ZNF530Q6P9A1 599 aaPredicted RBP11.72□□□□□ -0.53
SNRNP70-208ENST00000599687 DCAF5Q96JK2 942 aa11.72□□□□□ -0.53
SNRNP70-208ENST00000599687 TFCP2L1Q9NZI6 479 aa11.72□□□□□ -0.53
SNRNP70-208ENST00000599687 TAF1LQ8IZX4 1826 aa11.72□□□□□ -0.53
SNRNP70-208ENST00000599687 C5P01031 1676 aa11.71□□□□□ -0.53
SNRNP70-208ENST00000599687 PALM3A6NDB9 673 aaPredicted RBP11.71□□□□□ -0.53
SNRNP70-208ENST00000599687 ERVV-2B6SEH9 535 aa11.71□□□□□ -0.53
SNRNP70-208ENST00000599687 E9PSI1 815 aa11.71□□□□□ -0.53
SNRNP70-208ENST00000599687 SMAPO00193 183 aa11.71□□□□□ -0.53
SNRNP70-208ENST00000599687 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.53
SNRNP70-208ENST00000599687 SLC16A10Q8TF71 515 aa11.71□□□□□ -0.53
SNRNP70-208ENST00000599687 ZBTB3Q9H5J0 574 aa11.71□□□□□ -0.53
SNRNP70-208ENST00000599687 ASAP1Q9ULH1 1129 aa11.71□□□□□ -0.53
SNRNP70-208ENST00000599687 HMOX1P09601 288 aa11.7□□□□□ -0.54
SNRNP70-208ENST00000599687 DNAJB2P25686 324 aa11.7□□□□□ -0.54
SNRNP70-208ENST00000599687 LMOD1P29536 600 aaPredicted RBP11.7□□□□□ -0.54
SNRNP70-208ENST00000599687 CTDSPL2Q05D32 466 aa11.7□□□□□ -0.54
SNRNP70-208ENST00000599687 C1orf141Q5JVX7 400 aa11.7□□□□□ -0.54
SNRNP70-208ENST00000599687 NUDT18Q6ZVK8 323 aa11.7□□□□□ -0.54
SNRNP70-208ENST00000599687 ALG2Q9H553 416 aa11.7□□□□□ -0.54
SNRNP70-208ENST00000599687 ATG3Q9NT62 314 aa11.7□□□□□ -0.54
SNRNP70-208ENST00000599687 COL3A1P02461 1466 aaPredicted RBP11.7□□□□□ -0.54
SNRNP70-208ENST00000599687 KDM6AO15550 1401 aaPredicted RBP11.69□□□□□ -0.54
SNRNP70-208ENST00000599687 LOC102724428A0A0B4J2F2 783 aa11.69□□□□□ -0.54
SNRNP70-208ENST00000599687 SIK1P57059 783 aa11.69□□□□□ -0.54
SNRNP70-208ENST00000599687 COL23A1Q86Y22 540 aaPredicted RBP11.69□□□□□ -0.54
SNRNP70-208ENST00000599687 TMEM134Q9H6X4 195 aa11.69□□□□□ -0.54
SNRNP70-208ENST00000599687 COL24A1Q17RW2 1714 aa11.69□□□□□ -0.54
SNRNP70-208ENST00000599687 KDM4AO75164 1064 aa11.68□□□□□ -0.54
SNRNP70-208ENST00000599687 DGAT1O75907 488 aa11.68□□□□□ -0.54
SNRNP70-208ENST00000599687 SLC4A3P48751 1232 aa11.68□□□□□ -0.54
SNRNP70-208ENST00000599687 CABP4P57796 275 aa11.68□□□□□ -0.54
SNRNP70-208ENST00000599687 CCDC27Q2M243 656 aa11.68□□□□□ -0.54
SNRNP70-208ENST00000599687 RDH13Q8NBN7 331 aa11.68□□□□□ -0.54
SNRNP70-208ENST00000599687 UCN2Q96RP3 112 aa11.68□□□□□ -0.54
SNRNP70-208ENST00000599687 PNMA3Q9UL41 463 aa11.68□□□□□ -0.54
SNRNP70-208ENST00000599687 C4BP0C0L5 1744 aa11.68□□□□□ -0.54
SNRNP70-208ENST00000599687 PPP2R1AP30153 589 aa11.67□□□□□ -0.54
SNRNP70-208ENST00000599687 ATP6V1AP38606 617 aa11.67□□□□□ -0.54
SNRNP70-208ENST00000599687 APLP1P51693 650 aa11.67□□□□□ -0.54
SNRNP70-208ENST00000599687 ITPK1Q13572 414 aa11.67□□□□□ -0.54
SNRNP70-208ENST00000599687 AKAP4Q5JQC9 854 aa11.67□□□□□ -0.54
SNRNP70-208ENST00000599687 NFATC2IPQ8NCF5 419 aa11.67□□□□□ -0.54
SNRNP70-208ENST00000599687 LINC00116Q8NCU8 138 aa11.67□□□□□ -0.54
SNRNP70-208ENST00000599687 NKX2-3Q8TAU0 364 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms